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CcUC04G078370 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G078370
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:32903005..32903509
RNA-Seq ExpressionCcUC04G078370
SyntenyCcUC04G078370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS71023.1 Os01g0215725 [Oryza sativa Japonica Group]8.9e-0743.81Show/hide
Query:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC
        KN  S AVAP TAK  PR+   P    RYG    +PNA A     +  VGAAA G  E   AVG LADD + E  G +EV+GV + + E E+  +  R  
Subjt:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC

Query:  RAAEA
         AA A
Subjt:  RAAEA

KAB8080499.1 hypothetical protein EE612_001047 [Oryza sativa]8.9e-0743.81Show/hide
Query:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC
        KN  S AVAP TAK  PR+   P    RYG    +PNA A     +  VGAAA G  E   AVG LADD + E  G +EV+GV + + E E+  +  R  
Subjt:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC

Query:  RAAEA
         AA A
Subjt:  RAAEA

RWW66623.1 hypothetical protein BHE74_00026013 [Ensete ventricosum]3.2e-0436.29Show/hide
Query:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKC----DNPNASANNPIKTTVGAAASGVSEEGFAVGELADDRKCEGTG--TEEVSGVTKGITEVENCII
        K   S+AVAP TAKF P  K W  F  R GG      D    +     +  VGAAA  V+EEG AV  +AD    EG G   ++++GV + ++EVE  I 
Subjt:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKC----DNPNASANNPIKTTVGAAASGVSEEGFAVGELADDRKCEGTG--TEEVSGVTKGITEVENCII

Query:  WC---RKCRAAEAEEEEDRKRIHG
              +  A + +E++   R+HG
Subjt:  WC---RKCRAAEAEEEEDRKRIHG

TrEMBL top hitse value%identityAlignment
A0A0P0V046 Os01g0215725 protein4.3e-0743.81Show/hide
Query:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC
        KN  S AVAP TAK  PR+   P    RYG    +PNA A     +  VGAAA G  E   AVG LADD + E  G +EV+GV + + E E+  +  R  
Subjt:  KNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANN-PIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKC

Query:  RAAEA
         AA A
Subjt:  RAAEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCAAAGAATTCCGCGTCCAACGCCGTGGCTCCGGCTACAGCAAAGTTCGCTCCGCGGCTGAAATTTTGGCCCTGTTTCATTCCCAGATACGGCGGCAAATGCGA
CAACCCAAATGCCTCCGCTAACAACCCAATTAAAACGACCGTCGGAGCAGCGGCCAGTGGCGTGTCTGAAGAAGGTTTCGCCGTAGGGGAGCTTGCCGATGACAGGAAAT
GCGAGGGCACCGGAACGGAGGAAGTTTCCGGTGTCACTAAGGGAATCACCGAAGTTGAAAATTGCATTATATGGTGTAGAAAGTGCAGAGCTGCAGAGGCAGAGGAAGAG
GAAGACCGAAAGCGAATTCATGGCAACTGGCAGGAGTCAGGTGAAGCCGGAAGACTCGGGTGG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCAAAGAATTCCGCGTCCAACGCCGTGGCTCCGGCTACAGCAAAGTTCGCTCCGCGGCTGAAATTTTGGCCCTGTTTCATTCCCAGATACGGCGGCAAATGCGA
CAACCCAAATGCCTCCGCTAACAACCCAATTAAAACGACCGTCGGAGCAGCGGCCAGTGGCGTGTCTGAAGAAGGTTTCGCCGTAGGGGAGCTTGCCGATGACAGGAAAT
GCGAGGGCACCGGAACGGAGGAAGTTTCCGGTGTCACTAAGGGAATCACCGAAGTTGAAAATTGCATTATATGGTGTAGAAAGTGCAGAGCTGCAGAGGCAGAGGAAGAG
GAAGACCGAAAGCGAATTCATGGCAACTGGCAGGAGTCAGGTGAAGCCGGAAGACTCGGGTGG
Protein sequenceShow/hide protein sequence
MVPKNSASNAVAPATAKFAPRLKFWPCFIPRYGGKCDNPNASANNPIKTTVGAAASGVSEEGFAVGELADDRKCEGTGTEEVSGVTKGITEVENCIIWCRKCRAAEAEEE
EDRKRIHGNWQESGEAGRLGW