; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G079710 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G079710
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLOB domain-containing protein
Genome locationCicolChr04:33985471..33985950
RNA-Seq ExpressionCcUC04G079710
SyntenyCcUC04G079710
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052511.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]6.3e-3958.94Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGAS+V+++L  L Y ER+E   SL++EAEA   DPV GCVA IS L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP
        Q+RL  LQT+L IARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP

KAE8647756.1 hypothetical protein Csa_003034 [Cucumis sativus]8.5e-3655.41Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGAS+V+++L    Y ER+E  KSL++EAEA   DPVHGCVAFI+ L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDVNILPPRWPAESSSQRPTKE---DQSPPPQNH
        Q RL  LQT+L I ++QL +YM      LPP     +S   P       + PP  ++
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDVNILPPRWPAESSSQRPTKE---DQSPPPQNH

XP_004134907.3 protein LATERAL ORGAN BOUNDARIES [Cucumis sativus]8.5e-3655.41Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGAS+V+++L    Y ER+E  KSL++EAEA   DPVHGCVAFI+ L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDVNILPPRWPAESSSQRPTKE---DQSPPPQNH
        Q RL  LQT+L I ++QL +YM      LPP     +S   P       + PP  ++
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDVNILPPRWPAESSSQRPTKE---DQSPPPQNH

XP_008439580.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]1.1e-3858.94Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGAS+V+++L  L Y ER+E   SL++EAEA   DPV GCVA IS L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP
        Q+RL  LQT+L IARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP

XP_038881578.1 protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]4.2e-5179.03Show/hide
Query:  SGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQ
        S S+SQSQK  + YGSPCAACKFLR+KC+PDCIFAPHFPADQPKKFEA+HTIYGAS+V++LLNQLSY ERD+AAKSLIYEAEAWQ DPVHGCV FISILQ
Subjt:  SGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQ

Query:  NRLNDLQTQLFIARRQLSTYMLED
         RLN+LQ +L IARR+LSTY++ +
Subjt:  NRLNDLQTQLFIARRQLSTYMLED

TrEMBL top hitse value%identityAlignment
A0A0A0KIS2 LOB domain-containing protein4.7e-4055.95Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGAS+V+++L    Y ER+E  KSL++EAEA   DPVHGCVAFI+ L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLED-------------------VNILPPRWPAESS-SQRPTKEDQS
        Q RL  LQT+L I ++QL +YM                      ++ L P+WP ESS SQ+P  EDQS
Subjt:  QNRLNDLQTQLFIARRQLSTYMLED-------------------VNILPPRWPAESS-SQRPTKEDQS

A0A151RZM5 LOB domain-containing protein 361.8e-3153.97Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACK LR+KC  +C+FAP+FP D P++F  VH ++GAS+VA+LLN+LS  +R++A KSL YEAEA   DPV+GCV FIS+LQ RL  +QT+L  A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY--------MLEDVNILPPRWP
        +LSTY        +L +  +LPP  P
Subjt:  QLSTY--------MLEDVNILPPRWP

A0A1S3AYN9 LOB domain-containing protein 12-like5.2e-3958.94Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGAS+V+++L  L Y ER+E   SL++EAEA   DPV GCVA IS L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP
        Q+RL  LQT+L IARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP

A0A2P6Q5T3 Putative transcription factor AS2-LOB family1.0e-3156.67Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH +YGAS+VA++LN+L+   R++A  SL YEAEA   DPV+GCV  ISILQNRL  LQT L+ A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTYMLEDVNILPPRWPAE
         LSTY+     ++P   P +
Subjt:  QLSTYMLEDVNILPPRWPAE

A0A5D3CQL4 LOB domain-containing protein 12-like3.0e-3958.94Show/hide
Query:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGAS+V+++L  L Y ER+E   SL++EAEA   DPV GCVA IS L
Subjt:  MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISIL

Query:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP
        Q+RL  LQT+L IARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLFIARRQLSTYMLEDV---------NILPPRWPAESSSQRP

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 63.2e-3058.49Show/hide
Query:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIAR
        GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCVA ISILQ  L  LQ  L  A+
Subjt:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIAR

Query:  RQLSTY
         +LS Y
Subjt:  RQLSTY

O04479 Protein ASYMMETRIC LEAVES 27.2e-3056.19Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  IS+LQ++L  LQ  L  A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

Q32SG3 LOB domain-containing protein 64.2e-3053.33Show/hide
Query:  SGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQ
        S S+S +       GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  ISILQ
Subjt:  SGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQ

Query:  NRLNDLQTQLFIARRQLSTY
        + L  LQ  L  A+ +LS Y
Subjt:  NRLNDLQTQLFIARRQLSTY

Q8LQH4 LOB domain-containing protein 63.2e-3058.49Show/hide
Query:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIAR
        GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCVA ISILQ  L  LQ  L  A+
Subjt:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIAR

Query:  RQLSTY
         +LS Y
Subjt:  RQLSTY

Q9FKZ3 LOB domain-containing protein 362.2e-3148.61Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GAS+VA+LLN+L+  +R++A  SL YEAEA   DPV+GCV  ISILQ+RL  +   L  A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTYMLED--VNILPPRWPA-ESSSQRPTKEDQSPPPQNHNRI
        +L+TY+     + IL P + +     QRP+    S   Q+H+ +
Subjt:  QLSTYMLED--VNILPPRWPA-ESSSQRPTKEDQSPPPQNHNRI

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein5.1e-3156.19Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  IS+LQ++L  LQ  L  A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein5.1e-3156.19Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  IS+LQ++L  LQ  L  A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein5.1e-3156.19Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  IS+LQ++L  LQ  L  A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.4 Lateral organ boundaries (LOB) domain family protein5.1e-3156.19Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GAS+V +LLN+L   +R++A  SL YEA+    DPV+GCV  IS+LQ++L  LQ  L  A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT5G66870.1 ASYMMETRIC LEAVES 2-like 11.6e-3248.61Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GAS+VA+LLN+L+  +R++A  SL YEAEA   DPV+GCV  ISILQ+RL  +   L  A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLNDLQTQLFIARR

Query:  QLSTYMLED--VNILPPRWPA-ESSSQRPTKEDQSPPPQNHNRI
        +L+TY+     + IL P + +     QRP+    S   Q+H+ +
Subjt:  QLSTYMLED--VNILPPRWPA-ESSSQRPTKEDQSPPPQNHNRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTT
GCCCCACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCCACGTCGCAAGGCTTCTCAATCAGTTGAGCTATAAGGAG
CGAGATGAAGCCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAATGATCCTGTGCATGGTTGCGTTGCCTTTATATCGATTCTTCAGAACAGGCTTAAT
GATCTTCAAACTCAACTCTTCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGCTGAATCGTCAAGTCAA
CGGCCAACGAAGGAGGATCAATCGCCGCCGCCGCAAAATCACAATAGGATTGAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTT
GCCCCACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCCACGTCGCAAGGCTTCTCAATCAGTTGAGCTATAAGGAG
CGAGATGAAGCCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAATGATCCTGTGCATGGTTGCGTTGCCTTTATATCGATTCTTCAGAACAGGCTTAAT
GATCTTCAAACTCAACTCTTCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGCTGAATCGTCAAGTCAA
CGGCCAACGAAGGAGGATCAATCGCCGCCGCCGCAAAATCACAATAGGATTGAATACTGA
Protein sequenceShow/hide protein sequence
MSGSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASHVARLLNQLSYKERDEAAKSLIYEAEAWQNDPVHGCVAFISILQNRLN
DLQTQLFIARRQLSTYMLEDVNILPPRWPAESSSQRPTKEDQSPPPQNHNRIEY