; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G079740 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G079740
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionF-box protein SKIP19-like
Genome locationCicolChr04:34001161..34003374
RNA-Seq ExpressionCcUC04G079740
SyntenyCcUC04G079740
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]3.7e-9461.13Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ IN
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSN+LR+LR++ C  ISDEGL +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLDDDDFPRY
        Y+ F G S F D  D   Y
Subjt:  YHRFFGDSYFLDDDDFPRY

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]4.4e-9562.03Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ IN
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSNQLR+LR++ C  ISDEGL +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLDDDDF
        Y+ F G S F D  DF
Subjt:  YHRFFGDSYFLDDDDF

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]1.0e-9963.9Show/hide
Query:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY
        MESN +     EARNWLELPA++  MIL+KLGAI+ILSSAQ+VCS WRKICKDP MWRV+DMHN GE D    +DY+LE MC  AVDRSCG+L+DINI+Y
Subjt:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY

Query:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ
        FGT+ELLQ+I  SSNQLRRLRI+ C+ I+D GL+EAVSKLPLLEHLEI LCSF  +TL+TVGRCC LLKSLKL+ Q  R   +  D +A+A+AE MP L+
Subjt:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ

Query:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYHR
         LQI G+ LT+ GLQAILDGCPDLESLDLR CFNL L G+L   CAE IK L LPHD TD  E  ++T    D DS D D  SGFS I F  + D DY+ 
Subjt:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYHR

Query:  FFGDSYFLDDDDF
        + G S F D  DF
Subjt:  FFGDSYFLDDDDF

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]3.7e-9461.86Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ IN
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSNQLR+LR++ C  ISDEG  +AVSKLPLLE LEI   SFDVETL+T+G C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLD
        Y+ F G S F D
Subjt:  YHRFFGDSYFLD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]2.0e-11670.77Show/hide
Query:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY
        MESNS+IQ E+EARNWL+LPAEVM MIL+KLGAI+IL+SAQNVCSSWRKICKDP MWRVIDM NSG L     +D++LE MCRHAVDRSCGQL+DINIEY
Subjt:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY

Query:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ
        FGTDELLQ+I  SSNQLRRLR+ DCYDISDEGLTEA+S+LPLLEHLEIF+ SFDVETLKTVGRCCPLLK LKL ++ Y    M  + EALA+AETMPKL+
Subjt:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ

Query:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDS-TDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYH
         LQI GNGLTNMGLQAILDGCPDLESLDLR CF+L L G+L K CAE  KVL+LPHD  T+G E + KTI+  D DS+D D S  FS I      D DY+
Subjt:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDS-TDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYH

Query:  RFFGDSYFLDDDDFPRYGSSGDDDF
         F  DS FLD DD  R   S  +DF
Subjt:  RFFGDSYFLDDDDFPRYGSSGDDDF

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like4.8e-10063.9Show/hide
Query:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY
        MESN +     EARNWLELPA++  MIL+KLGAI+ILSSAQ+VCS WRKICKDP MWRV+DMHN GE D    +DY+LE MC  AVDRSCG+L+DINI+Y
Subjt:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY

Query:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ
        FGT+ELLQ+I  SSNQLRRLRI+ C+ I+D GL+EAVSKLPLLEHLEI LCSF  +TL+TVGRCC LLKSLKL+ Q  R   +  D +A+A+AE MP L+
Subjt:  FGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQ

Query:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYHR
         LQI G+ LT+ GLQAILDGCPDLESLDLR CFNL L G+L   CAE IK L LPHD TD  E  ++T    D DS D D  SGFS I F  + D DY+ 
Subjt:  QLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYHR

Query:  FFGDSYFLDDDDF
        + G S F D  DF
Subjt:  FFGDSYFLDDDDF

A0A6J1ECV6 F-box protein SKIP19-like isoform X15.2e-9461.13Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ I 
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSNQLR LR++ C  ISDEGL +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLDDDDFPRY
        Y+ F G S F D  D   Y
Subjt:  YHRFFGDSYFLDDDDFPRY

A0A6J1EGI8 F-box protein SKIP19-like isoform X24.0e-9461.86Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ I 
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSNQLR LR++ C  ISDEGL +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLD
        Y+ F G S F D
Subjt:  YHRFFGDSYFLD

A0A6J1ILH5 F-box protein SKIP19-like1.8e-9461.86Show/hide
Query:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN
        MESNS   P S   EARNWLELPA+V  MIL+KLG +DIL++AQ+VCSSWRKIC+DP MWRV+DM  SG+      +DY+LE MCR AVDRSCGQL+ IN
Subjt:  MESNSMIQPES---EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDIN

Query:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP
        IE+FGTD+LLQ+I  SSNQLR+LR++ C  ISDEG  +AVSKLPLLE LEI   SFDVETL+T+G C PLLKSLKLN+QFYR  R+  D  ALA+AE MP
Subjt:  IEYFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMP

Query:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD
         L+ LQI GN LTN GL+AILDGCPDLESLDLR CFNL L G+L  +C+E IK L LPHD TD  E S + +   D   +D     G S      D D D
Subjt:  KLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLD
        Y+ F G S F D
Subjt:  YHRFFGDSYFLD

A0A6P3ZH66 F-box protein SKIP193.4e-9359.18Show/hide
Query:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMY-LDYNLESMCRHAVDRSCGQLVDINIE
        MES+     + E RNWLELP +V   IL +LGAI+IL+SAQNVCSSWR ICKDP MWR IDM N G    D Y +DY+LE+MCRHA+D SCGQLVDINIE
Subjt:  MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMY-LDYNLESMCRHAVDRSCGQLVDINIE

Query:  YFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKL
        +FGTDELL+++   S+ +RRLR++ CY ISD GL+EA +KLPLLE LEI   S   E L+ +G CCPLLKSLKLN + +R   +  DDEA+A+A++MP+L
Subjt:  YFGTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKL

Query:  QQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDC--DSKDVDCSSGFSRIGFFPDYDVD
        + LQ+ GN LTN GLQAILDGCP LESLDLR CFN+ L G L KRCAE IK L  P+DST+G E      N +D   DS D D  SGFS I F  D D +
Subjt:  QQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDC--DSKDVDCSSGFSRIGFFPDYDVD

Query:  YHRFFGDSYFLDDDDF
        Y+ F G S   DD DF
Subjt:  YHRFFGDSYFLDDDDF

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.1e-5947.86Show/hide
Query:  MIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY--FGT
        +++ E +  NW ELP +++  IL++L  ++IL +A+ VC SWR++ KDP +WR IDM N   L    Y  Y +E+ CRH VD S G L++ NI+   F T
Subjt:  MIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY--FGT

Query:  DELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQ
          LL ++A  S+ LRRLR+     I+  G+ EA+ KLPLLE LE+  CS + E  KT+G+ CP LK+LKL   F+  L    D++ALA+A+TMP L  LQ
Subjt:  DELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQ

Query:  ICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD
        +  NGLTN+GL AILDGCP LE LDLR CFN+ L G+LE++C E IK    P+D  D
Subjt:  ICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD

Q9M0U7 Putative F-box protein At4g054751.8e-5947.1Show/hide
Query:  SNSMIQPESEAR-NWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYF
        S   ++ + E R NW++LP E+   IL++L   DIL +A+ +C +WR+ICKDP MWR I++      D  MY +++ ESMCRH VD S G L++INIE+F
Subjt:  SNSMIQPESEAR-NWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYF

Query:  GTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN----------KQFYRGLRMGRDDEALA
         +D LL +I   S  L+ L I     ++++G+   + KLPLLE L IF  S  ++ LK +G  CP LK+LKLN           Q      +  DD+ALA
Subjt:  GTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN----------KQFYRGLRMGRDDEALA

Query:  VAETMPKLQQLQICGNGLTNMGLQAILDGCPDLES-LDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSI
        +AE+MPKL+ LQ+ GNGLTN GL AILDGCP LE  LD+R CFN+ L G LEKRC + IK L  PHDST     SI
Subjt:  VAETMPKLQQLQICGNGLTNMGLQAILDGCPDLES-LDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSI

Q9M0U8 Putative F-box/LRR-repeat protein 218.6e-5445.39Show/hide
Query:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINI-EYFGTDELLQHI
        E RNW++LP E+   IL++L   DIL +AQ VC  WR+ICKDP MWR I+       D  MY +++  SMCRH VD S G L++IN+ E+F +D LL +I
Subjt:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINI-EYFGTDELLQHI

Query:  AHSSNQLRRLRILDCYD-ISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGR---------------------DDE
          +   LR L +  C+  ++  G+  A++K+PLLE LE+      ++ LK +G  CP LK+LKLN        +GR                     DD+
Subjt:  AHSSNQLRRLRILDCYD-ISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGR---------------------DDE

Query:  ALAVAETMPKLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDST
        ALA+AE+MPKL  LQ+  N LTN GL AILDGCP LE LD+R CF + L G LEKRC E IK L  P DST
Subjt:  ALAVAETMPKLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDST

Q9M0U9 F-box protein SKIP191.1e-8054.13Show/hide
Query:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA
        E+ NW ELP E+   IL +LGAI+IL +AQ VC SWR++CKDP MWR IDMHN G+LD    +DYNLE MCRHAVDRS G LVDI I YFGT +LL +IA
Subjt:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA

Query:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLTN
        H S+ LR LR++ C  I+D+G  EAV KLP LE LE+  CSF VE+L+ VG+CC  +K+LKLNK      +   DD+ALA+AETMPKL+ LQ+CGNGL++
Subjt:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLTN

Query:  MGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD-YHRFFGDSYFLDD
         GL AILD C +LE LDLR CFN+ L G+L+KRC ES+KV+  P+DS    ++   + +    D  D+D  SG        D D + Y+ F G S F D 
Subjt:  MGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD-YHRFFGDSYFLDD

Query:  DDF
        D F
Subjt:  DDF

Q9S9V9 Putative F-box/LRR-repeat protein 239.8e-7452.94Show/hide
Query:  IQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDEL
        +  + + RNW ELP+++   IL++LGAI+IL +AQ VC  W ++CKDP MWR ID+ N  +  A     Y+LESMCRHAVDRS G L++I I Y+GT++L
Subjt:  IQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDEL

Query:  LQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNK-QFYRGLRMGRDDEALAVAETMPKLQQLQIC
        + +IA  S+ L+ L ++ C+ I+DEG+ +AVSK+PLLE+LE+  C F  E+L+ +GR CP LK+LKLN+         G DD A A+AE+MP+L+ LQ+ 
Subjt:  LQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNK-QFYRGLRMGRDDEALAVAETMPKLQQLQIC

Query:  GNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD
        GNGLTN GL AILDGCP LE LDLR CFN+ L G+L+KRC E IK L  P+DS D
Subjt:  GNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein7.7e-8254.13Show/hide
Query:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA
        E+ NW ELP E+   IL +LGAI+IL +AQ VC SWR++CKDP MWR IDMHN G+LD    +DYNLE MCRHAVDRS G LVDI I YFGT +LL +IA
Subjt:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA

Query:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLTN
        H S+ LR LR++ C  I+D+G  EAV KLP LE LE+  CSF VE+L+ VG+CC  +K+LKLNK      +   DD+ALA+AETMPKL+ LQ+CGNGL++
Subjt:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLTN

Query:  MGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD-YHRFFGDSYFLDD
         GL AILD C +LE LDLR CFN+ L G+L+KRC ES+KV+  P+DS    ++   + +    D  D+D  SG        D D + Y+ F G S F D 
Subjt:  MGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVD-YHRFFGDSYFLDD

Query:  DDF
        D F
Subjt:  DDF

AT4G05470.1 RNI-like superfamily protein6.1e-5545.39Show/hide
Query:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINI-EYFGTDELLQHI
        E RNW++LP E+   IL++L   DIL +AQ VC  WR+ICKDP MWR I+       D  MY +++  SMCRH VD S G L++IN+ E+F +D LL +I
Subjt:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINI-EYFGTDELLQHI

Query:  AHSSNQLRRLRILDCYD-ISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGR---------------------DDE
          +   LR L +  C+  ++  G+  A++K+PLLE LE+      ++ LK +G  CP LK+LKLN        +GR                     DD+
Subjt:  AHSSNQLRRLRILDCYD-ISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGR---------------------DDE

Query:  ALAVAETMPKLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDST
        ALA+AE+MPKL  LQ+  N LTN GL AILDGCP LE LD+R CF + L G LEKRC E IK L  P DST
Subjt:  ALAVAETMPKLQQLQICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDST

AT4G05475.1 RNI-like superfamily protein1.3e-6047.1Show/hide
Query:  SNSMIQPESEAR-NWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYF
        S   ++ + E R NW++LP E+   IL++L   DIL +A+ +C +WR+ICKDP MWR I++      D  MY +++ ESMCRH VD S G L++INIE+F
Subjt:  SNSMIQPESEAR-NWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYF

Query:  GTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN----------KQFYRGLRMGRDDEALA
         +D LL +I   S  L+ L I     ++++G+   + KLPLLE L IF  S  ++ LK +G  CP LK+LKLN           Q      +  DD+ALA
Subjt:  GTDELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN----------KQFYRGLRMGRDDEALA

Query:  VAETMPKLQQLQICGNGLTNMGLQAILDGCPDLES-LDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSI
        +AE+MPKL+ LQ+ GNGLTN GL AILDGCP LE  LD+R CFN+ L G LEKRC + IK L  PHDST     SI
Subjt:  VAETMPKLQQLQICGNGLTNMGLQAILDGCPDLES-LDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSI

AT4G05490.1 RNI-like superfamily protein7.5e-6147.86Show/hide
Query:  MIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY--FGT
        +++ E +  NW ELP +++  IL++L  ++IL +A+ VC SWR++ KDP +WR IDM N   L    Y  Y +E+ CRH VD S G L++ NI+   F T
Subjt:  MIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEY--FGT

Query:  DELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQ
          LL ++A  S+ LRRLR+     I+  G+ EA+ KLPLLE LE+  CS + E  KT+G+ CP LK+LKL   F+  L    D++ALA+A+TMP L  LQ
Subjt:  DELLQHIAHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQ

Query:  ICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD
        +  NGLTN+GL AILDGCP LE LDLR CFN+ L G+LE++C E IK    P+D  D
Subjt:  ICGNGLTNMGLQAILDGCPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTD

AT4G05497.1 RNI-like superfamily protein5.2e-5447.21Show/hide
Query:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA
        E RNW ELP E+   IL++LGAI+IL +AQ VC SWR++C+DP MWR ID+     L   + L Y +E +C  AVD S G L++INI+Y      L +IA
Subjt:  EARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHIA

Query:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEI-FLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLT
          S+ LRRL ++DC  +   G+ EA  KLPLLE L+I +  S   + LK VG+ CP L++LKLN     G     D  ALA+AETMP L+ LQ+  NGL+
Subjt:  HSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEI-FLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLT

Query:  NMGLQAILDGCPDLESLDLRGCFNLYLEGELEK
          GL AIL+GCP L++L L  C N+ + G++ K
Subjt:  NMGLQAILDGCPDLESLDLRGCFNLYLEGELEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAACTCCATGATTCAGCCGGAATCGGAAGCGCGGAACTGGCTTGAACTACCTGCAGAAGTAATGTTTATGATTCTGGTGAAGCTAGGCGCCATTGATATCCT
CTCCAGCGCCCAAAACGTTTGCTCTTCGTGGCGTAAGATTTGCAAAGATCCTCCCATGTGGCGTGTGATCGATATGCACAATTCGGGTGAATTGGATGCTGATATGTATT
TGGATTACAATTTGGAGAGTATGTGCAGGCACGCTGTTGATCGTAGTTGTGGCCAATTGGTCGACATCAACATCGAGTACTTTGGCACCGATGAATTGCTCCAACACATT
GCTCACAGCTCAAATCAACTCAGAAGACTTAGGATTTTAGATTGCTATGACATCTCAGATGAGGGATTGACTGAAGCAGTTTCAAAACTTCCATTGTTGGAGCATCTTGA
AATATTTCTCTGTTCATTTGATGTGGAAACGTTGAAAACTGTTGGAAGGTGTTGCCCTCTTTTGAAATCGCTGAAACTGAACAAGCAGTTTTATAGAGGACTTAGGATGG
GCCGTGACGATGAGGCCCTTGCTGTTGCTGAAACTATGCCTAAATTACAACAGCTTCAAATATGTGGCAATGGCCTAACTAACATGGGTTTGCAAGCTATTCTTGATGGC
TGCCCTGATTTAGAATCTCTCGACCTACGTGGATGTTTCAATTTATATTTGGAGGGGGAGTTGGAAAAAAGATGTGCTGAAAGCATCAAAGTTTTGTATTTGCCACACGA
TTCCACTGATGGCTGTGAATTATCAATCAAAACTATCAATTGCCATGATTGTGATTCTAAAGATGTAGATTGCTCTTCTGGTTTCTCTCGCATCGGTTTCTTTCCCGATT
ACGATGTCGATTACCATCGTTTCTTTGGGGACAGTTATTTCCTTGATGATGACGATTTCCCTAGATATGGGTCCTCAGGGGATGACGATTTCTTGGACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGAACTCCATGATTCAGCCGGAATCGGAAGCGCGGAACTGGCTTGAACTACCTGCAGAAGTAATGTTTATGATTCTGGTGAAGCTAGGCGCCATTGATATCCT
CTCCAGCGCCCAAAACGTTTGCTCTTCGTGGCGTAAGATTTGCAAAGATCCTCCCATGTGGCGTGTGATCGATATGCACAATTCGGGTGAATTGGATGCTGATATGTATT
TGGATTACAATTTGGAGAGTATGTGCAGGCACGCTGTTGATCGTAGTTGTGGCCAATTGGTCGACATCAACATCGAGTACTTTGGCACCGATGAATTGCTCCAACACATT
GCTCACAGCTCAAATCAACTCAGAAGACTTAGGATTTTAGATTGCTATGACATCTCAGATGAGGGATTGACTGAAGCAGTTTCAAAACTTCCATTGTTGGAGCATCTTGA
AATATTTCTCTGTTCATTTGATGTGGAAACGTTGAAAACTGTTGGAAGGTGTTGCCCTCTTTTGAAATCGCTGAAACTGAACAAGCAGTTTTATAGAGGACTTAGGATGG
GCCGTGACGATGAGGCCCTTGCTGTTGCTGAAACTATGCCTAAATTACAACAGCTTCAAATATGTGGCAATGGCCTAACTAACATGGGTTTGCAAGCTATTCTTGATGGC
TGCCCTGATTTAGAATCTCTCGACCTACGTGGATGTTTCAATTTATATTTGGAGGGGGAGTTGGAAAAAAGATGTGCTGAAAGCATCAAAGTTTTGTATTTGCCACACGA
TTCCACTGATGGCTGTGAATTATCAATCAAAACTATCAATTGCCATGATTGTGATTCTAAAGATGTAGATTGCTCTTCTGGTTTCTCTCGCATCGGTTTCTTTCCCGATT
ACGATGTCGATTACCATCGTTTCTTTGGGGACAGTTATTTCCTTGATGATGACGATTTCCCTAGATATGGGTCCTCAGGGGATGACGATTTCTTGGACTACTGA
Protein sequenceShow/hide protein sequence
MESNSMIQPESEARNWLELPAEVMFMILVKLGAIDILSSAQNVCSSWRKICKDPPMWRVIDMHNSGELDADMYLDYNLESMCRHAVDRSCGQLVDINIEYFGTDELLQHI
AHSSNQLRRLRILDCYDISDEGLTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKQFYRGLRMGRDDEALAVAETMPKLQQLQICGNGLTNMGLQAILDG
CPDLESLDLRGCFNLYLEGELEKRCAESIKVLYLPHDSTDGCELSIKTINCHDCDSKDVDCSSGFSRIGFFPDYDVDYHRFFGDSYFLDDDDFPRYGSSGDDDFLDY