; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G079980 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G079980
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:34239067..34239477
RNA-Seq ExpressionCcUC04G079980
SyntenyCcUC04G079980
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594423.1 hypothetical protein SDJN03_10976, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5285.38Show/hide
Query:  VAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAACGITGV
        +AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAACGITGV
Subjt:  VAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAACGITGV

Query:  TLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        TLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  TLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

XP_022925668.1 uncharacterized protein LOC111433017 [Cucurbita moschata]4.5e-5482.35Show/hide
Query:  MMIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATA
        M+IPIK VAA+V FLPLIVA+ +A EIRPSEHGLEFQS PPAG+KSSPEMRSFF GTSSP P+  LPLPK MNSSE+ GWWTHRDGG+KR++NALLVATA
Subjt:  MMIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATA

Query:  ACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ACGITGVTLLVGSTLFYIYKVKNQ  LPLS+NNNHK
Subjt:  ACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

XP_022926736.1 uncharacterized protein LOC111433768 [Cucurbita moschata]1.3e-5384.56Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MI IK++AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CGITGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

XP_023003567.1 uncharacterized protein LOC111497130 [Cucurbita maxima]5.0e-5383.58Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MI IK++AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NNN+
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH

XP_023518243.1 uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]1.3e-5384.56Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MI IK++AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CGITGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

TrEMBL top hitse value%identityAlignment
A0A0A0KM65 Uncharacterized protein1.1e-5381.48Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MIPIK+ AAIVAF  LI +I A  EIRPSEHGLEFQS PP GDKSSPEMRSFFGG +SPTPEVALP+PKT+NSSES GWW H DGG+KRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        CGITGVTLLVGSTLFYI+K KN+RS+PLS NNNHK
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1CZN3 uncharacterized protein LOC1110157295.0e-5179.86Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVA----APEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLV
        MIPIK  AA+   LPLIVA++A    A EIRPSEHGLEFQS PPAGDKSSPEM SFFGG SSPTP+ ALPLPK MNSSE+ GWWT RDGGD RL+NALLV
Subjt:  MIPIKAVAAIVAFLPLIVAIVA----APEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLV

Query:  ATAACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ATAA GITGVTLLVGS LFY+YKVKNQRSLPLS+NNNHK
Subjt:  ATAACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1EFQ9 uncharacterized protein LOC1114337686.4e-5484.56Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MI IK++AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CGITGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

A0A6J1EFW4 uncharacterized protein LOC1114330172.2e-5482.35Show/hide
Query:  MMIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATA
        M+IPIK VAA+V FLPLIVA+ +A EIRPSEHGLEFQS PPAG+KSSPEMRSFF GTSSP P+  LPLPK MNSSE+ GWWTHRDGG+KR++NALLVATA
Subjt:  MMIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATA

Query:  ACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ACGITGVTLLVGSTLFYIYKVKNQ  LPLS+NNNHK
Subjt:  ACGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1KMY3 uncharacterized protein LOC1114971302.4e-5383.58Show/hide
Query:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA
        MI IK++AA+  +L  IVAI AA EIRPSEHGLEFQS P AGDKSSPEMRSFFGGTSSPTPEVALPLPK MNSSE+ GWWTHRDGGDKRL+NALLVATAA
Subjt:  MIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NNN+
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein5.8e-0732.81Show/hide
Query:  IVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSS-PTPEVALPLPKTMNSSESSGWWT-HRDGGDKRLKN-ALLVATAACGITGV
        I+  + L   I+ A E+RPS+HGLE+   P      S EM SFFG  SS     ++ P    + S+  S   T  +D  D R+ N  L+V +  CG++GV
Subjt:  IVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSS-PTPEVALPLPKTMNSSESSGWWT-HRDGGDKRLKN-ALLVATAACGITGV

Query:  TLLVGSTLFYIYKVKNQRSLPLSTNNNH
         L+V S L Y       ++  ++ ++ H
Subjt:  TLLVGSTLFYIYKVKNQRSLPLSTNNNH

AT4G21740.1 unknown protein1.6e-1236.3Show/hide
Query:  VAFLPLIVAIVAAPEIRPSEHGLEFQ-SAPPAGDKSSP-EMRSFFGG--TSSPTPEVALPLPK--TMNSSESSGWWTHRDGG----DKRLKNALLVATAA
        + FL +      A E+RPS+HGL++Q S+PP    S P +M+SFFG   +SSP P     LPK    +  +   WW  RDG     D  +++  L A+  
Subjt:  VAFLPLIVAIVAAPEIRPSEHGLEFQ-SAPPAGDKSSP-EMRSFFGG--TSSPTPEVALPLPK--TMNSSESSGWWTHRDGG----DKRLKNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        CG++GV LLV  TL Y ++ +        T N+ K
Subjt:  CGITGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTCCAATCAAAGCAGTGGCGGCGATCGTCGCGTTTTTGCCATTGATCGTGGCAATCGTGGCAGCCCCGGAGATACGGCCGTCGGAGCACGGTTTGGAGTTTCA
AAGCGCTCCGCCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCGTTTTTCGGAGGAACATCGTCGCCCACACCGGAAGTGGCATTGCCGTTGCCGAAGACAATGAATT
CGAGCGAGTCGTCGGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTTAAAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTA
GTGGGTTCTACGTTATTCTACATTTACAAGGTCAAAAATCAAAGATCATTGCCGTTATCTACAAATAATAATCACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTCCAATCAAAGCAGTGGCGGCGATCGTCGCGTTTTTGCCATTGATCGTGGCAATCGTGGCAGCCCCGGAGATACGGCCGTCGGAGCACGGTTTGGAGTTTCA
AAGCGCTCCGCCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCGTTTTTCGGAGGAACATCGTCGCCCACACCGGAAGTGGCATTGCCGTTGCCGAAGACAATGAATT
CGAGCGAGTCGTCGGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTTAAAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTA
GTGGGTTCTACGTTATTCTACATTTACAAGGTCAAAAATCAAAGATCATTGCCGTTATCTACAAATAATAATCACAAATAA
Protein sequenceShow/hide protein sequence
MMIPIKAVAAIVAFLPLIVAIVAAPEIRPSEHGLEFQSAPPAGDKSSPEMRSFFGGTSSPTPEVALPLPKTMNSSESSGWWTHRDGGDKRLKNALLVATAACGITGVTLL
VGSTLFYIYKVKNQRSLPLSTNNNHK