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CcUC04G080040 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G080040
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGermin-like protein
Genome locationCicolChr04:34293685..34299189
RNA-Seq ExpressionCcUC04G080040
SyntenyCcUC04G080040
Gene Ontology termsGO:0048046 - apoplast (cellular component)
GO:0030145 - manganese ion binding (molecular function)
InterPro domainsIPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49469.1 hypothetical protein Csa_003117 [Cucumis sativus]7.7e-1077.08Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AIVAFS+QNPGI+T+EN V GSK DIPT ILAKAFQT+ AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

XP_004134615.1 putative germin-like protein 2-1 [Cucumis sativus]8.5e-0972.92Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DIPT ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

XP_004134624.1 putative germin-like protein 2-1 [Cucumis sativus]7.2e-0870.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DI T ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

XP_008439539.1 PREDICTED: putative germin-like protein 2-1 [Cucumis melo]7.2e-0870.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DI T ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

XP_031742920.1 putative germin-like protein 2-1 [Cucumis sativus]7.7e-1077.08Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AIVAFS+QNPGI+T+EN V GSK DIPT ILAKAFQT+ AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

TrEMBL top hitse value%identityAlignment
A0A0A0KIX1 Germin-like protein3.5e-0870.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DI T ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

A0A0A0KKW4 Germin-like protein3.7e-1077.08Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AIVAFS+QNPGI+T+EN V GSK DIPT ILAKAFQT+ AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

A0A0A0KKX1 Germin-like protein4.1e-0972.92Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DIPT ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

A0A1S3AZN5 Germin-like protein3.5e-0870.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DI T ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

A0A5A7UBA7 Germin-like protein3.5e-0870.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QNPG+IT+ N V GSK DI T ILAKAFQTD+AII N QSK
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

SwissProt top hitse value%identityAlignment
Q6K5P8 Putative germin-like protein 2-38.3e-0756.25Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AIVA S+QNPG+ITV N V GSK  I   ILAKAFQ +  ++   Q+K
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

Q6K5P9 Putative germin-like protein 2-26.3e-0755.77Show/hide
Query:  NNPFAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        NN  A+ A S+QNPG+ITV N V GSK  I   ILAKAFQ D  II   Q++
Subjt:  NNPFAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

Q6K5Q0 Putative germin-like protein 2-13.5e-0550Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        A+ A S+QNPG+IT+ N V GSK  I   ILAKAFQ +  I+   Q++
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

Q6YZA9 Germin-like protein 8-27.8e-0549.09Show/hide
Query:  DPNNP-FAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        +P+ P  AI A S+QNPG+IT+ N V GS   I   IL KAFQ D  II   Q++
Subjt:  DPNNP-FAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

Q9LEA7 Germin-like protein subfamily 1 member 82.0e-0545.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QN G+IT+ N + GSK D+   +LA+AFQ D   + N Q++
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

Arabidopsis top hitse value%identityAlignment
AT4G14630.1 germin-like protein 91.5e-0645.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        AI A S+QN G+IT+ N + GSK D+   +LA+AFQ D   + N Q++
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

AT5G38930.1 RmlC-like cupins superfamily protein3.6e-0545.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        A  A S+QNPG+IT+   V G+   I   ILAKAFQ D  ++ + Q+K
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

AT5G38940.1 RmlC-like cupins superfamily protein1.6e-0545.83Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        A  A S+QNPG+IT+ N V G+   I   ILAKAFQ +  ++ + Q+K
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

AT5G38960.1 RmlC-like cupins superfamily protein1.2e-0541.54Show/hide
Query:  PNSLQDFYVADPNNP-FAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        P  L  F V     P  A  + S+QNPG+I + N + GSK  I   +LAKAFQ D  +I   Q K
Subjt:  PNSLQDFYVADPNNP-FAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK

AT5G39190.1 germin-like protein 24.7e-0543.75Show/hide
Query:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK
        A    S+QN G+IT+ N V GS   I   +LA+AFQ DA+++   Q+K
Subjt:  AIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAAATCCTAATTCACTTCAAGATTTTTATGTTGCAGATCCAAATAATCCTTTTGCGATTGTTGCTTTCAGCAACCAAAACCCAGGCATTATTACCGTTGAAAA
TTATGTTTCTGGATCAAAGCTTGACATCCCAACTTTTATTCTTGCAAAGGCATTTCAAACCGATGCTGCTATAATAACCAACTTTCAATCCAAGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAAATCCTAATTCACTTCAAGATTTTTATGTTGCAGATCCAAATAATCCTTTTGCGATTGTTGCTTTCAGCAACCAAAACCCAGGCATTATTACCGTTGAAAA
TTATGTTTCTGGATCAAAGCTTGACATCCCAACTTTTATTCTTGCAAAGGCATTTCAAACCGATGCTGCTATAATAACCAACTTTCAATCCAAGTGTTAG
Protein sequenceShow/hide protein sequence
MASNPNSLQDFYVADPNNPFAIVAFSNQNPGIITVENYVSGSKLDIPTFILAKAFQTDAAIITNFQSKC