; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G080310 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G080310
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr04:34466263..34470601
RNA-Seq ExpressionCcUC04G080310
SyntenyCcUC04G080310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8096106.1 hypothetical protein N665_0317s0012 [Sinapis alba]2.3e-0638.33Show/hide
Query:  VGRRGHARTRWSVNRNSATGRRRHPRSRRGSWHSRPGGWWWSPHHLPGWRRSHRSLRKLRRNRERLWRGSPWSRCRELWWRHRWRHTSPDRRWSLP----
        + R  +ARTRWS      + RR H R+R       P  WW + HH P  RRSHR    +RR R    R  P +  R    R   R+TSP RR        
Subjt:  VGRRGHARTRWSVNRNSATGRRRHPRSRRGSWHSRPGGWWWSPHHLPGWRRSHRSLRKLRRNRERLWRGSPWSRCRELWWRHRWRHTSPDRRWSLP----

Query:  -WKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGTSNTRPSHSRS
         WKH           SR  H R       R R LRLHH R R T+S N PSK RL LN+R+SR + +  T ++R S++ S
Subjt:  -WKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGTSNTRPSHSRS

PNR57927.1 hypothetical protein PHYPA_004921 [Physcomitrium patens]5.7e-1335.79Show/hide
Query:  RRGHARTRWSVNRNSATGRRRHP---RSRRGSWHSR------PGGWWWSPHHLPGWRRSHRSL---------RKLRR--NRERLWRGS----PWSRCREL
        RR H R R  ++    TGRRRHP   RS     HSR      P   W  P H    RR+HR L         R LRR   R R W  S    P +  R L
Subjt:  RRGHARTRWSVNRNSATGRRRHP---RSRRGSWHSR------PGGWWWSPHHLPGWRRSHRSL---------RKLRR--NRERLWRGS----PWSRCREL

Query:  ---------WWRHRWRHTS-PDRRWS---LPWKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGT
                 W  H WR  +   R W+   LPW  R     + +   R C    G  R  R+   RLHHPR R  HS+  P +  L L QR SRD+   GT
Subjt:  ---------WWRHRWRHTS-PDRRWS---LPWKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGT

Query:  SNTRPSHSR-SIDSLSTGLFSRWWTLNCHGNDLFAAEKNEPKCTTLVTFLISLFTLRWRKLTELLAVAEDEVHMPIEGHELADQLATILDGDPHPVVNI
         +  P  SR S      GL      L+ H N L  A+K +P+   L   L+S F L  R  ++LLA+ + +VH+ IE HELA+QL  +L   PH  V +
Subjt:  SNTRPSHSR-SIDSLSTGLFSRWWTLNCHGNDLFAAEKNEPKCTTLVTFLISLFTLRWRKLTELLAVAEDEVHMPIEGHELADQLATILDGDPHPVVNI

TrEMBL top hitse value%identityAlignment
A0A2K1KVV7 Uncharacterized protein2.8e-1335.79Show/hide
Query:  RRGHARTRWSVNRNSATGRRRHP---RSRRGSWHSR------PGGWWWSPHHLPGWRRSHRSL---------RKLRR--NRERLWRGS----PWSRCREL
        RR H R R  ++    TGRRRHP   RS     HSR      P   W  P H    RR+HR L         R LRR   R R W  S    P +  R L
Subjt:  RRGHARTRWSVNRNSATGRRRHP---RSRRGSWHSR------PGGWWWSPHHLPGWRRSHRSL---------RKLRR--NRERLWRGS----PWSRCREL

Query:  ---------WWRHRWRHTS-PDRRWS---LPWKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGT
                 W  H WR  +   R W+   LPW  R     + +   R C    G  R  R+   RLHHPR R  HS+  P +  L L QR SRD+   GT
Subjt:  ---------WWRHRWRHTS-PDRRWS---LPWKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSRDTPTSGT

Query:  SNTRPSHSR-SIDSLSTGLFSRWWTLNCHGNDLFAAEKNEPKCTTLVTFLISLFTLRWRKLTELLAVAEDEVHMPIEGHELADQLATILDGDPHPVVNI
         +  P  SR S      GL      L+ H N L  A+K +P+   L   L+S F L  R  ++LLA+ + +VH+ IE HELA+QL  +L   PH  V +
Subjt:  SNTRPSHSR-SIDSLSTGLFSRWWTLNCHGNDLFAAEKNEPKCTTLVTFLISLFTLRWRKLTELLAVAEDEVHMPIEGHELADQLATILDGDPHPVVNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATCCTTATCCTAAGCAGTCAGCACAGAGCAATGAAGAAAGAACTTTCCGTGAGCAACAAGAAGTGCAAACCACCAAAGAACAAGTAATCAACAATATCCCAAC
TCCTGAACACAAATATGGCAAGGAACAAAAACGCGTACCAACACTATTGCTGTTGATTTTGCTGTTGGTTCTGTGGGTTGGGCGGAGGGGGCATGCCAGGACGAGGTGGT
CCGTAAACAGGAACAGCGCCACCGGGCGGAGGAGGCATCCCAGGTCGAGGCGGGGGAGCTGGCATTCCAGGCCTGGGGGGTGGTGGTGGTCCCCTCATCACCTGCCCGGT
TGGCGGAGGTCCCATAGGTCTCTGCGCAAATTGAGGAGGAACCGGGAAAGGTTGTGGCGGGGCTCCCCCTGGTCTCGCTGCAGAGAATTGTGGTGGAGGCACCGGTGGAG
GCATACCTCTCCCGACCGGAGGTGGAGCTTGCCCTGGAAACATCGGCATCTGACCAGGTGGACGGATAACGGGGGCAGCCGGATATGTCATCGGCGGAGCGGACAGCTGA
GGTACTGGCGGGCGAGATATTTGAGGCTGCATCATCCCCGGAGCAGGTCCACCCACTCCGCGAACTGGCCCAGCAAGACCAGGCTGCGCCTGAACCAACGGAGCAGTCGG
GATACCCCTACCAGCGGCACGTCCAATACCAGGCCCAGCCATAGCCGCAGCATTGACAGCCTTAGCACGGGACTCTTCAGCAGGTGGTGGACCCTCAACTGTCATGGAAA
TGACCTCTTCGCCGCGGAGAAGAACGAGCCCAAGTGTACGACGCTCGTCACGTTCCTCATTAGTCTTTTTACCCTTCGCTGGAGGAAGCTTACGGAACTCCTCGCAGTCG
CCGAGGACGAGGTTCATATGCCGATCGAAGGCCATGAACTTGCCGACCAATTGGCGACCATCTTGGATGGTGACCCTCATCCGGTAGTTAATATACTGGAGCATCTTCGA
ACTCTTAGACATCGACATTGTGCCAGAATGTCAAACGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTATCCTTATCCTAAGCAGTCAGCACAGAGCAATGAAGAAAGAACTTTCCGTGAGCAACAAGAAGTGCAAACCACCAAAGAACAAGTAATCAACAATATCCCAAC
TCCTGAACACAAATATGGCAAGGAACAAAAACGCGTACCAACACTATTGCTGTTGATTTTGCTGTTGGTTCTGTGGGTTGGGCGGAGGGGGCATGCCAGGACGAGGTGGT
CCGTAAACAGGAACAGCGCCACCGGGCGGAGGAGGCATCCCAGGTCGAGGCGGGGGAGCTGGCATTCCAGGCCTGGGGGGTGGTGGTGGTCCCCTCATCACCTGCCCGGT
TGGCGGAGGTCCCATAGGTCTCTGCGCAAATTGAGGAGGAACCGGGAAAGGTTGTGGCGGGGCTCCCCCTGGTCTCGCTGCAGAGAATTGTGGTGGAGGCACCGGTGGAG
GCATACCTCTCCCGACCGGAGGTGGAGCTTGCCCTGGAAACATCGGCATCTGACCAGGTGGACGGATAACGGGGGCAGCCGGATATGTCATCGGCGGAGCGGACAGCTGA
GGTACTGGCGGGCGAGATATTTGAGGCTGCATCATCCCCGGAGCAGGTCCACCCACTCCGCGAACTGGCCCAGCAAGACCAGGCTGCGCCTGAACCAACGGAGCAGTCGG
GATACCCCTACCAGCGGCACGTCCAATACCAGGCCCAGCCATAGCCGCAGCATTGACAGCCTTAGCACGGGACTCTTCAGCAGGTGGTGGACCCTCAACTGTCATGGAAA
TGACCTCTTCGCCGCGGAGAAGAACGAGCCCAAGTGTACGACGCTCGTCACGTTCCTCATTAGTCTTTTTACCCTTCGCTGGAGGAAGCTTACGGAACTCCTCGCAGTCG
CCGAGGACGAGGTTCATATGCCGATCGAAGGCCATGAACTTGCCGACCAATTGGCGACCATCTTGGATGGTGACCCTCATCCGGTAGTTAATATACTGGAGCATCTTCGA
ACTCTTAGACATCGACATTGTGCCAGAATGTCAAACGCCTGA
Protein sequenceShow/hide protein sequence
MVYPYPKQSAQSNEERTFREQQEVQTTKEQVINNIPTPEHKYGKEQKRVPTLLLLILLLVLWVGRRGHARTRWSVNRNSATGRRRHPRSRRGSWHSRPGGWWWSPHHLPG
WRRSHRSLRKLRRNRERLWRGSPWSRCRELWWRHRWRHTSPDRRWSLPWKHRHLTRWTDNGGSRICHRRSGQLRYWRARYLRLHHPRSRSTHSANWPSKTRLRLNQRSSR
DTPTSGTSNTRPSHSRSIDSLSTGLFSRWWTLNCHGNDLFAAEKNEPKCTTLVTFLISLFTLRWRKLTELLAVAEDEVHMPIEGHELADQLATILDGDPHPVVNILEHLR
TLRHRHCARMSNA