CuGenDBv2

Gene ID	CcUC04G080400
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	CicolChr04:34572369..34575849
RNA-Seq Expression	CcUC04G080400
Synteny	CcUC04G080400
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

9.6e-44

93.4

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA+VIMKF IASLFMWITPITLL+GFNHN IPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKAD PSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
        QNKKEE
Subjt:  QNKKEE

XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]

7.6e-41

89.62

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MASVIMKF  ASLFMWITPI LLYGFNHNLIPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEP+SKHEPDP FLAEAKASINQS G+ADDPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKE+
Subjt:  QNKKEE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

1.2e-41

89.62

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA VI KF IASLFMWITPI LLYGFNHNLIPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+DPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

9.9e-41

87.74

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA VI KF IASLFMWITPI LLYGFNHNLIPGS  LNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDP F+AEAKASINQ+ GKA+DPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

4.5e-41

88.68

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MASVI KF IASLFMWITPI LLYGFNHNLIPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDP FL EAKASINQS GK ++PSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.6e-44

93.4

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA+VIMKF IASLFMWITPITLL+GFNHN IPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKAD PSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
        QNKKEE
Subjt:  QNKKEE

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

6.3e-41

87.74

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA+VI KF IASLFMWITPITLL+GFNHN IPGS +LNPHSLTLLSGFLAVISVN+VI IYIIMAMKEPSSKHEPDP FLAEAKASINQSTGKAD PS+A
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

3.7e-41

89.62

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MASVIMKF  ASLFMWITPI LLYGFNHNLIPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEP+SKHEPDP FLAEAKASINQS G+ADDPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKE+
Subjt:  QNKKEE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

5.7e-42

89.62

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA VI KF IASLFMWITPI LLYGFNHNLIPGS QLNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDP F+AEAKASINQS GKA+DPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.8e-41

87.74

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA VI KF IASLFMWITPI LLYGFNHNLIPGS  LNPHSLTLLSGFLAVISVN+VIAIYIIMAMKEPSSKHEPDP F+AEAKASINQ+ GKA+DPSQA
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
         NKKEE
Subjt:  QNKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

3.8e-30

64.15

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA V+ KFLIAS+FMWI P+ +LYGFNHNL+PGS  L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD  FLAEAK S+N+ T  A      
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKEE
          KK+E
Subjt:  QNKKEE

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

7.1e-29

Show/hide

Query:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA
        MA V+ KFLIAS+FMWI PI +LYGFN++L+PGS  L+PHSLTLLSGFLAV+SVN+VI  YI +A+KEP+ KH+PD +F+AEAK S+ + T    +   A
Subjt:  MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQA

Query:  QNKKE
          K+E
Subjt:  QNKKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAGCGTCATTATGAAGTTCCTCATTGCATCACTGTTTATGTGGATAACTCCCATCACTTTATTATATGGTTTTAACCATAATTTGATTCCGGGTTCACCACAATT
GAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAACATTGTCATTGCTATTTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATG
AACCGGATCCTACATTTCTTGCCGAGGCAAAAGCTAGCATAAACCAGTCTACTGGGAAAGCTGATGACCCTTCCCAAGCTCAGAATAAGAAGGAAGAATAG

mRNA sequence

Show/hide mRNA sequence

TTCTTCTCTGACTAGCTCTGGCAAGCCTAACGTGAGTAACTTCAATTAACTTTTCCTTCTCTCCCCTCATTTTAGTTTGTGATGCAAAATGAGACTAAGCACAAAGAACA
AGAGAGTTAAACATTAGGAGAGTGAGAGTGCGAGAAAGAGAAAAAATCGCCAGAAAGAAAAGGTTGAGAGAGCAGTCCATTTTAGTAGTTTCATTCGATTATAACGTAGG
AGAAAATAAAAGAACCTCAAATTCAAAAGTGGGCCAATTCTCATCCTCTCCCCATCTTTAGGTCATCCCATCAGCCGAGCCCAAAAAAATCTCTCTTTTGTGAGATCTGA
AATCAAACCGCGAGAGGTGAGAGGTTGCACAATCGTGAAAGGTTGCTGAGATTGGGACGAGCAGATCTGGGTGGCCTGCACGTCGGACGGTGAGCGGCAGATCAAGGCTC
AGGGCGGCGCGAATCAGGGCCGTCGTTCGACTGTGTCTGCGGCGGGGCAAACAGGAAATCCACGGAGCAGATCGCCGGCACGGTCTGGGCAGGGCGGCGGCGCGAATCTT
CACTGAGCAGGGCCGTGCAGTTGTCGGCGGTCGTCGACGGTGACAGGGTGGACTGAGTATGGCTGGACTCAAATCTTCTGGAATCCATTTTGTGTCCTTCATGGTTATGC
AAGTCTAATTGTGAAACTTTTTATGAGACATTGTTGACAAATTGAAGATACCAATGGCAAGCGTCATTATGAAGTTCCTCATTGCATCACTGTTTATGTGGATAACTCCC
ATCACTTTATTATATGGTTTTAACCATAATTTGATTCCGGGTTCACCACAATTGAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAACAT
TGTCATTGCTATTTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATGAACCGGATCCTACATTTCTTGCCGAGGCAAAAGCTAGCATAAACCAGTCTACTGGGA
AAGCTGATGACCCTTCCCAAGCTCAGAATAAGAAGGAAGAATAGGCAACGAGGAAGGGAAGCTTTGATGAGGAACAATCTCAAGCTTAATATTCCAGGATTTAAGATGAT
AATCAGTTTCATGTGTGATCAGAGTGTCCTGCATGTCAATTGAGATTTGGGAAGAAAGAAGGTTCTGTTTCTTCACTTGTTTTGTTTTATTAAGATAGATTGCATTTAAA
TTTGATTCTTTTTTTTCCACCGACGATGTTCTTCACTATGTGTTGCGAACTCTTTGCTTCTACTGTCAGAACGTGAAGAGATGTGCTAGATTTTGGGGAGAATTAAAAGA
AAATTTAGATTATTGTATTTCTAGCTTCATAGCTCAAATTTAACATAATCCTGGATTCCTGACGGTTTCA

Protein sequence

Show/hide protein sequence

MASVIMKFLIASLFMWITPITLLYGFNHNLIPGSPQLNPHSLTLLSGFLAVISVNIVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADDPSQAQNKKEE

CcUC04G080400 (gene) of Watermelon (PI 537277) v1 genome