; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC04G080460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC04G080460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionVQ domain-containing protein
Genome locationCicolChr04:34613572..34614120
RNA-Seq ExpressionCcUC04G080460
SyntenyCcUC04G080460
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052442.1 VQ domain-containing protein [Cucumis melo var. makuwa]8.7e-7783.7Show/hide
Query:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H +AS S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD RLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDEDL+YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

KAG6581510.1 hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6277.71Show/hide
Query:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH
        +S +SDQWRAQFY  TH  A  STA P   P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFGQAGD+ 
Subjt:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH

Query:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGN
         HNNHPSVMLPFSD R  QLR+ P EH  P P  N GFS  AAELMEIQNLIDEDLNYDL+ELGMEF SSSGNGN
Subjt:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGN

XP_008441071.1 PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo]1.9e-7683.7Show/hide
Query:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H  AS S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD RLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDEDL+YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

XP_023544848.1 uncharacterized protein LOC111804320 [Cucurbita pepo subsp. pepo]1.3e-5975.43Show/hide
Query:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH
        +S +SDQWRAQFY  T   A  ST  P   P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSHKGPVNLSFGQAGD+ 
Subjt:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH

Query:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGN
         HNNHPSVMLPFSD R  QLR  P EH  P P    GF   AAELMEIQNLIDEDLNYDL+ELGMEFSSS+GNGN
Subjt:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGN

XP_038881626.1 VQ motif-containing protein 22-like [Benincasa hispida]4.7e-8388.4Show/hide
Query:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH
        MSITSDQW +QFY H H  ASPS+A  HHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH
Subjt:  MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDH

Query:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYF
        LHNNH SVMLPFSD ++ QLRQ  PEHRFP P +NNGFSR AAELMEIQNLIDED NYDLQELGMEFSSSSGNGNYGGGYF
Subjt:  LHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYF

TrEMBL top hitse value%identityAlignment
A0A0A0KII5 VQ domain-containing protein8.2e-7380.75Show/hide
Query:  MSITSDQWRAQFY-PHTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H   S S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFY-PHTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLR-QPPPEHRFPNPPENNGFSRQAA--ELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD  LLQ R Q  PEHRFP P E+NGFS   A  +LMEIQNLIDEDL+YDLQELGMEF SSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLR-QPPPEHRFPNPPENNGFSRQAA--ELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

A0A1S3B3C3 uncharacterized protein LOC1034852959.3e-7783.7Show/hide
Query:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H  AS S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD RLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDEDL+YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

A0A5D3CPL3 VQ domain-containing protein4.2e-7783.7Show/hide
Query:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H +AS S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD RLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDEDL+YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

A0A6J1IJI1 uncharacterized protein LOC111478005 isoform X12.3e-5973.86Show/hide
Query:  SITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDHL
        S +SDQWRAQFY  TH  A  ST  P   P  N NSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA +P GSH+GPVNLSFGQAGD+  
Subjt:  SITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDHL

Query:  HNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYG
        HNNHPSVMLPFSD R  QLR+ P EH  P P  N G S   AELMEIQNLIDEDLNYDL+ELGMEF  S+GNG  G
Subjt:  HNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYG

E5GCL8 VQ domain-containing protein9.3e-7783.7Show/hide
Query:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD
        MSITSDQW  QFY  H+H  AS S+A  HHGPNT N+NSISKPRRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA+LPLGSHKGPVNLSFGQ GD
Subjt:  MSITSDQWRAQFYP-HTHAAASPSTAPPHHGPNT-NTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGD

Query:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH
        DHLHNNHPSVMLPFSD RLLQ RQ PPE RFP   E+NGFS   AELMEI+NLIDEDL+YDLQELGMEFSSSSGNGNYGGGYFH
Subjt:  DHLHNNHPSVMLPFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 221.6e-0442.05Show/hide
Query:  DQWRAQFYPH------THAAASPSTAPPHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        ++W +QFY +      T   AS +      G  T+        T  ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DQWRAQFYPH------THAAASPSTAPPHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein1.0e-0646.03Show/hide
Query:  PSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGS
        P   PP   P+++ N    PR+R+RASR+APTT+L   T+NFR +VQ+FTG  A+  + P  S
Subjt:  PSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGS

AT3G22160.1 VQ motif-containing protein1.1e-0542.05Show/hide
Query:  DQWRAQFYPH------THAAASPSTAPPHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        ++W +QFY +      T   AS +      G  T+        T  ++KP RRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DQWRAQFYPH------THAAASPSTAPPHHGPNTN--------TNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

AT4G15120.1 VQ motif-containing protein1.1e-0540.91Show/hide
Query:  MSITSDQWRAQFYPH--------THAAASPSTAPPHHGP-NTNTNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        M+ +++ W +QFY +        +    + +TA     P + +   ++KP RRRSRASR+ PTTL N  TANFR +VQQFTG  +A A
Subjt:  MSITSDQWRAQFYPH--------THAAASPSTAPPHHGP-NTNTNSISKP-RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

AT4G20000.1 VQ motif-containing protein7.0e-0862.26Show/hide
Query:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFG
        RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  A G +      KGPV L FG
Subjt:  RRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFG

AT4G39720.1 VQ motif-containing protein1.5e-0530.17Show/hide
Query:  STAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLS-----FG-QAGDDHLHNNHPSVMLPFSD--
        S+A     P  N   I K ++RSRASR+APTT+L   T+NFR +VQ+FTG  A     PL ++   VN +      G  +   + +N +  ++ PF+   
Subjt:  STAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLS-----FG-QAGDDHLHNNHPSVMLPFSD--

Query:  ARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLN------YDLQELGM--------EFSSSSGNGNYGGG
             L       ++ NP  NNGF     E M +Q L+   ++      +D   LGM          ++++ NGN   G
Subjt:  ARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLN------YDLQELGM--------EFSSSSGNGNYGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCACCAGCGATCAATGGCGGGCCCAATTCTACCCCCATACCCACGCCGCCGCCTCACCCTCCACCGCCCCCCCCCACCACGGCCCCAATACTAACACTAACTC
CATTTCCAAGCCCAGACGCCGCTCCAGAGCTTCCCGGAAGGCACCGACGACGTTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTC
AGGCCGCCGGCGCCGCCTTGCCTTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGATCACCTCCATAACAACCACCCCTCTGTTATGCTC
CCTTTCTCCGACGCCCGCCTTCTTCAGCTCCGGCAGCCGCCGCCGGAGCACCGCTTCCCCAACCCGCCGGAAAATAATGGGTTTTCTCGGCAGGCGGCGGAATTGATGGA
AATTCAAAATCTGATTGATGAGGATTTGAATTACGATCTCCAGGAATTGGGGATGGAGTTTTCTTCTTCCAGTGGGAATGGGAATTACGGCGGTGGGTACTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCACCAGCGATCAATGGCGGGCCCAATTCTACCCCCATACCCACGCCGCCGCCTCACCCTCCACCGCCCCCCCCCACCACGGCCCCAATACTAACACTAACTC
CATTTCCAAGCCCAGACGCCGCTCCAGAGCTTCCCGGAAGGCACCGACGACGTTGCTCAACGCCAGCACCGCCAATTTCAGGGACTTGGTGCAGCAGTTCACGGGGTTTC
AGGCCGCCGGCGCCGCCTTGCCTTTGGGCAGCCACAAGGGTCCGGTCAACCTCAGCTTCGGGCAGGCTGGAGATGATCACCTCCATAACAACCACCCCTCTGTTATGCTC
CCTTTCTCCGACGCCCGCCTTCTTCAGCTCCGGCAGCCGCCGCCGGAGCACCGCTTCCCCAACCCGCCGGAAAATAATGGGTTTTCTCGGCAGGCGGCGGAATTGATGGA
AATTCAAAATCTGATTGATGAGGATTTGAATTACGATCTCCAGGAATTGGGGATGGAGTTTTCTTCTTCCAGTGGGAATGGGAATTACGGCGGTGGGTACTTCCATTGA
Protein sequenceShow/hide protein sequence
MSITSDQWRAQFYPHTHAAASPSTAPPHHGPNTNTNSISKPRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGAALPLGSHKGPVNLSFGQAGDDHLHNNHPSVML
PFSDARLLQLRQPPPEHRFPNPPENNGFSRQAAELMEIQNLIDEDLNYDLQELGMEFSSSSGNGNYGGGYFH