; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G083780 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G083780
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionreplication factor C subunit 3-like
Genome locationCicolChr05:2377778..2386081
RNA-Seq ExpressionCcUC05G083780
SyntenyCcUC05G083780
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049072.1 replication factor C subunit 3-like [Cucumis melo var. makuwa]2.3e-24379.63Show/hide
Query:  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTSFHVTTTT
        DS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+L SRDSDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLAINYH+GPLNST ++VT   
Subjt:  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTSFHVTTTT

Query:  PRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSANNNNKEEEEIRENRDDAER
              YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S  STSA+ N KEE     + +   +
Subjt:  PRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSANNNNKEEEEIRENRDDAER

Query:  KKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
        KKLLRERL VSNGG R D        GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AF
Subjt:  KKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF

Query:  GDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKI
        G+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KI
Subjt:  GDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKI

Query:  FFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKI
        FFCC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS+LF+EDENKLLTGWEDDIADVAKKI
Subjt:  FFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKI

Query:  VEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE
        VEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVE FYADY K+EEK+FV ERGSGEE VVKGQ+DP+RKNVNHFLKIE
Subjt:  VEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE

KAG6597225.1 Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia]2.4e-21971.66Show/hide
Query:  ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS
        ATQQQ     + SLRRSLSDS+ RRR RRR +IST  +SSKSSWS+KL KLLARL+LFSR+SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSS
Subjt:  ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS

Query:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLRS
        LAINYH+GPL +           GPH YA+S  T+ TQ+SL    VSK K+ WAPCL  +   +PP+            HQ+ +T TTTTVV KT SL  
Subjt:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLRS

Query:  TSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE
        +S+       E+I     + E +KLLRERLV  G R G      DGGG A     EKE Y+WGDKYRPKVLEDFICN+K A ELK++V+EKGCGH YIFE
Subjt:  TSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE

Query:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN
        G PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSN
Subjt:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN

Query:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED
        ETLMYVKWAIERNKGCSKIFFCCSD SKLLLL S CT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRSLEASWKKSRLFEED
Subjt:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED

Query:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD
        ENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVESFYADYNKMEEK FV E+G+GEEAV+K  HD
Subjt:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD

Query:  PMRKNVNHFLKIEEFIAKFMSCYKGEAN
        PMRKNVNHFLKIEEFIAKFMSCYKGEAN
Subjt:  PMRKNVNHFLKIEEFIAKFMSCYKGEAN

XP_008438224.1 PREDICTED: replication factor C subunit 3-like [Cucumis melo]8.5e-26280.28Show/hide
Query:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA
        MATQQQ +Q  PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+L SRDSDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLA
Subjt:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA

Query:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSA
        INYH+GPLNST ++VT         YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S  STSA
Subjt:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSA

Query:  NNNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE
        + N KEE     + +   +KKLLRERL VSNGG R D        GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFE
Subjt:  NNNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE

Query:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN
        GAPGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSN
Subjt:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN

Query:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED
        ETLMYVKWAIERNKGC+KIFFCC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS+LF+ED
Subjt:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED

Query:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD
        ENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVE FYADY K+EEK+FV ERGSGEE VVKGQ+D
Subjt:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD

Query:  PMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
        P+RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Subjt:  PMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK

XP_011650816.1 replication factor C subunit 3 [Cucumis sativus]1.6e-26079.24Show/hide
Query:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA
        MATQQ+Q+   PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+  SRDSDLTEESLEAHNKRIN LDTLDKTPK+SPYYRGLTDSSLA
Subjt:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA

Query:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTT-TTVVAKTASLRSTSANNN
        INYH+GPLNST +HVT         YA SAA STQSS+VSKFKDY APCL KQQP  P + P     KVP  HQRIQTVTT TTVV K     S S + +
Subjt:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTT-TTVVAKTASLRSTSANNN

Query:  NKEEEEIRENRDDAERKKLLRERLV---------SNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAP
           +EE+  + +   +KKLLRERLV         S GG    GGGV VV EMEKE YSWGD  RPKVLEDFICNKK A+ELKEMVKEKGCGHYYIFEGAP
Subjt:  NKEEEEIRENRDDAERKKLLRERLV---------SNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAP

Query:  GVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETL
        GVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLS ETL
Subjt:  GVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETL

Query:  MYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENK
        MY+KWA+ER KGCSKIFFCCSDASKLLLL SLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQAIRSLEASWKKS+LF+EDENK
Subjt:  MYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENK

Query:  LLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMR
        LLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVE FYADYNK+EEK FV E+GSGEEAV+KGQHD +R
Subjt:  LLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMR

Query:  KNVNHFLKIEEFIAKFMSCYKGEANAMKINK
        KNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Subjt:  KNVNHFLKIEEFIAKFMSCYKGEANAMKINK

XP_022975501.1 replication factor C subunit 3-like [Cucurbita maxima]7.8e-22372.34Show/hide
Query:  ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS
        ATQQQ     + SLRRSLSDS+ RRR+RR    + +++SSKSSWS+KL KLLARL+LFSR+SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSS
Subjt:  ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS

Query:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLR
        LAINYH+GPL +T  HVTT    GPH YA+S  T+ TQ+SL    VSK K+ WAPCL GK             N K P HHQ  +T TTTTVV KT SL 
Subjt:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLR

Query:  STSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIF
        ++S+       E+I     + E +KLLRERLV  G R G      DGGG A   E EKE Y+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH YIF
Subjt:  STSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIF

Query:  EGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLS
        EG PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLS
Subjt:  EGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLS

Query:  NETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEE
        NETLMYVKWAIERNKGCSKIFFCCSD SKLLLL SLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRSLEASWKKSRLFEE
Subjt:  NETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEE

Query:  DENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQH
        DENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVESFYADYNKMEEK FV ++G+GEEAV+K  H
Subjt:  DENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQH

Query:  DPMRKNVNHFLKIEEFIAKFMSCYKGEAN
        DPMRKNVNHFLKIEEFIAKFMSCYKGEAN
Subjt:  DPMRKNVNHFLKIEEFIAKFMSCYKGEAN

TrEMBL top hitse value%identityAlignment
A0A0A0L960 Uncharacterized protein8.7e-21279.16Show/hide
Query:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA
        MATQQ+Q+   PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+  SRDSDLTEESLEAHNKRIN LDTLDKTPK+SPYYRGLTDSSLA
Subjt:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA

Query:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTT-TTVVAKTASLRSTSANNN
        INYH+GPLNST +HVT         YA SAA STQSS+VSKFKDY APCL KQQP  P + P     KVP  HQRIQTVTT TTVV K     S S + +
Subjt:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTT-TTVVAKTASLRSTSANNN

Query:  NKEEEEIRENRDDAERKKLLRERLV---------SNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAP
           +EE+  + +   +KKLLRERLV         S GG    GGGV VV EMEKE YSWGD  RPKVLEDFICNKK A+ELKEMVKEKGCGHYYIFEGAP
Subjt:  NKEEEEIRENRDDAERKKLLRERLV---------SNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAP

Query:  GVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETL
        GVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCR       DQLS ETL
Subjt:  GVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETL

Query:  MYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENK
        MY+KWA+ER KGCSKIFFCCSDASKLLLL SLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNLRQAIRSLEASWKKS+LF+EDENK
Subjt:  MYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENK

Query:  LLTGWEDDIADVAKKIVEEQSPK
        LLTGWEDDIADVAKKIVEEQSPK
Subjt:  LLTGWEDDIADVAKKIVEEQSPK

A0A1S3AWH3 replication factor C subunit 3-like4.1e-26280.28Show/hide
Query:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA
        MATQQQ +Q  PSLRRSLSDS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+L SRDSDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLA
Subjt:  MATQQQQEQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLA

Query:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSA
        INYH+GPLNST ++VT         YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S  STSA
Subjt:  INYHYGPLNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSA

Query:  NNNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE
        + N KEE     + +   +KKLLRERL VSNGG R D        GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFE
Subjt:  NNNNKEEEEIRENRDDAERKKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE

Query:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN
        GAPGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSN
Subjt:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN

Query:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED
        ETLMYVKWAIERNKGC+KIFFCC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS+LF+ED
Subjt:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED

Query:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD
        ENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVE FYADY K+EEK+FV ERGSGEE VVKGQ+D
Subjt:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD

Query:  PMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
        P+RKNVNHFLKIEEFIAKFMSCYKGEANAMKINK
Subjt:  PMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK

A0A5A7TZV7 Replication factor C subunit 3-like1.1e-24379.63Show/hide
Query:  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTSFHVTTTT
        DS+HRRR  RRRATISTTSSKSSWSSKLGKLLARL+L SRDSDLTEESLEAHNKRIN LDTL+KTPK+SPYYRGLTDSSLAINYH+GPLNST ++VT   
Subjt:  DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGPLNSTSFHVTTTT

Query:  PRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSANNNNKEEEEIRENRDDAER
              YA SAA STQSS+VSKFK+YWAPCL KQQ  Q P  PH +  KV P  HQRIQTVTT TTVV K    S  STSA+ N KEE     + +   +
Subjt:  PRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKV-PHHHQRIQTVTT-TTVVAKTA--SLRSTSANNNNKEEEEIRENRDDAER

Query:  KKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF
        KKLLRERL VSNGG R D        GGGV VV EMEKE YSWGD YRPK LEDFICNKK A+ELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+AF
Subjt:  KKLLRERL-VSNGGRRGD--------GGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAF

Query:  GDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKI
        G+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQL+KESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KI
Subjt:  GDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKI

Query:  FFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKI
        FFCC+DASKL LL S+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKS+LF+EDENKLLTGWEDDIADVAKKI
Subjt:  FFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKI

Query:  VEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE
        VEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVE FYADY K+EEK+FV ERGSGEE VVKGQ+DP+RKNVNHFLKIE
Subjt:  VEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIE

A0A6J1G337 replication factor C subunit 3-like5.7e-21971.5Show/hide
Query:  ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS
        ATQQQ     + SLRRSLSDS+ RRR RRR +IST  +SSKSSWS+KL KLLARL+LFSR+SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSS
Subjt:  ATQQQ-QEQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS

Query:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLRS
        LAINYH+GPL +           GPH YA+S  T+ TQ+SL    VSK K+ WAPCL  +   +PP+            HQ+ +T TTTTVV KT SL  
Subjt:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLRS

Query:  TSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE
        +S+       E+I     + E +KLLRERLV  G R G      DGGG A     EKE Y+WGDKYRPKVLEDFICN+K A ELK++V+EKGCGH YIFE
Subjt:  TSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFE

Query:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN
        G PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLSN
Subjt:  GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSN

Query:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED
        ETLMYVKWAIERNKGCSKIFFCCSD SKLLLL S CT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRSLEASWKKSRLFEED
Subjt:  ETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEED

Query:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD
        ENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQ RVESFYADYNKMEEK FV E+G+GEEAV+K  HD
Subjt:  ENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHD

Query:  PMRKNVNHFLKIEEFIAKFMSCYKGEAN
        PMRKNVNHFLKIEEFIAKFMSCYKGEAN
Subjt:  PMRKNVNHFLKIEEFIAKFMSCYKGEAN

A0A6J1IEE5 replication factor C subunit 3-like3.8e-22372.34Show/hide
Query:  ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS
        ATQQQ     + SLRRSLSDS+ RRR+RR    + +++SSKSSWS+KL KLLARL+LFSR+SDLTEESL+AHN+RI   D LDKTP K+SPYYRGLTDSS
Subjt:  ATQQQQE-QPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTP-KTSPYYRGLTDSS

Query:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLR
        LAINYH+GPL +T  HVTT    GPH YA+S  T+ TQ+SL    VSK K+ WAPCL GK             N K P HHQ  +T TTTTVV KT SL 
Subjt:  LAINYHYGPLNSTSFHVTTTTPRGPHSYANSAATS-TQSSL----VSKFKDYWAPCL-GKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLR

Query:  STSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIF
        ++S+       E+I     + E +KLLRERLV  G R G      DGGG A   E EKE Y+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH YIF
Subjt:  STSANNNNKEEEEIRENRDDAERKKLLRERLVSNGGRRG------DGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIF

Query:  EGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLS
        EG PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKGFEKQVI QLIKE+ SPLPCNH  CRGILLCEADQLS
Subjt:  EGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLS

Query:  NETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEE
        NETLMYVKWAIERNKGCSKIFFCCSD SKLLLL SLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRSLEASWKKSRLFEE
Subjt:  NETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEE

Query:  DENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQH
        DENKLLTGWEDDIADVAKKIVEEQSPK        L  +   DV      +TLVDELKKFLDEELQRRVESFYADYNKMEEK FV ++G+GEEAV+K  H
Subjt:  DENKLLTGWEDDIADVAKKIVEEQSPKHF------LSLIYLMDVH----VQTLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQH

Query:  DPMRKNVNHFLKIEEFIAKFMSCYKGEAN
        DPMRKNVNHFLKIEEFIAKFMSCYKGEAN
Subjt:  DPMRKNVNHFLKIEEFIAKFMSCYKGEAN

SwissProt top hitse value%identityAlignment
P40938 Replication factor C subunit 33.7e-2626.98Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT
        W DKYRP  L     +K++A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G    +++   +     S+    IE+    S++++EVN S  
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT

Query:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA
           ++ VI +++K   +S      +  + + +LL E D+L+ +    ++  +E+     ++  CC+  SK++  +RS C  V +  PS ++I  VL  + 
Subjt:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA

Query:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK
        K++G +L  +LA R+A+ S  NLR+A+   EA   +   F  D+    T WE  + + A  IV +Q+P+  L +   +Y +  H       ++ L+ EL 
Subjt:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK

Query:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
           D +L+  V    A Y   E +  +G                  K + H   +E F+AKFM+ YK
Subjt:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK

Q2TBV1 Replication factor C subunit 31.7e-2626.98Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT
        W DKYRP  L     +K++A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G    +++   +     S+    IE+    S++++EVN S  
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT

Query:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA
           ++ VI +++K   +S      +  + + +LL E D+L+ +    ++  +E+     ++  CC+  SK++  +RS C  V +  PS ++I  VL  + 
Subjt:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA

Query:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK
        K++G +L  +LA R+A+ S  NLR+A+   EA   +   F  D+    T WE  + + A  IV +Q+P+  L +   +Y +  H       ++ L+ EL 
Subjt:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK

Query:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
           D +L+  V    A Y   E +  +G                  K + H   +E F+AKFM+ YK
Subjt:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK

Q852K3 Replication factor C subunit 53.4e-3530.16Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLG-SIEVKVKESSHYVEVNMSQ
        W DKYRPK L+    + + A  LK++V E+ C H  +F G  G GK+T++ A+++Q FG    ++K   K + + +      IE+ +  S+H+VE+N S 
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLG-SIEVKVKESSHYVEVNMSQ

Query:  TKGFEKQVIVQLIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFI
            ++ V+ ++IKE     P +    R    ++L E D+LS E    ++  +E+     ++  CC+ +SK+   +RS C  V ++ PS+ +IV+VLEFI
Subjt:  TKGFEKQVIVQLIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFI

Query:  AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDEL
         K++   L    A RIA  S  NLR+AI   E    +   F  ++      WE  ++++A  I++EQSPK   ++    Y + V+       ++ L+ EL
Subjt:  AKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDEL

Query:  KKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
         K LD +L+  +  + A Y   E K  +G +                        +E F+AKFMS YK
Subjt:  KKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK

Q8R323 Replication factor C subunit 31.3e-2626.98Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT
        W DKYRP  L     +K++A +L+ +V+     H  ++ G  G GK+T I  +LR+ +G    +++   +     S+    IE+    S++++EVN S  
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQT

Query:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA
           ++ VI +++K   +S      +  + + +LL E D+L+ +    ++  +E+     ++  CC+  SK++  +RS C  V +  PS ++I  VL  + 
Subjt:  KGFEKQVIVQLIK---ESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLEFIA

Query:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK
        +++G  L   LA R+A+ S  NLR+A+   EA   +   F ED+    T WE  + + A  IV +Q+P+  L +   +Y +  H       ++ L+ EL 
Subjt:  KQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLMDVH-------VQTLVDELK

Query:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
           D +L+  V    A Y   E +  +G                  K + H   +E F+AKFM+ YK
Subjt:  KFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK

Q8VXX4 Replication factor C subunit 34.7e-3731.89Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMS
        W DKYRPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G    ++K   + +  D  S  +  +E+    S+++VE+  S
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMS

Query:  QTKGFEKQVIVQ-LIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLE
           GF+ + IVQ +IKE     P +    +G   ++L E D+LS E    ++  +E+     ++  CC+ +SK+   ++S C  V ++ PS++EIV+VLE
Subjt:  QTKGFEKQVIVQ-LIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLE

Query:  FIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLM-------DVHVQTLVD
        F+AK++   L +  A RIA+ S  +LR+AI SLE    ++  F  ++      WE+ +A++A  +++EQSPK    +   +Y +       +V ++ L+ 
Subjt:  FIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLM-------DVHVQTLVD

Query:  ELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
        EL K LD EL+  V  + A Y   E +  +G++                        IE F+AKFMS YK
Subjt:  ELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK

Arabidopsis top hitse value%identityAlignment
AT5G27740.1 ATPase family associated with various cellular activities (AAA)3.3e-3831.89Show/hide
Query:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMS
        W DKYRPK L+  I ++  A +LK++V E+ C H  +F G  G GK+T+I A+L+Q +G    ++K   + +  D  S  +  +E+    S+++VE+  S
Subjt:  WGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMS

Query:  QTKGFEKQVIVQ-LIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLE
           GF+ + IVQ +IKE     P +    +G   ++L E D+LS E    ++  +E+     ++  CC+ +SK+   ++S C  V ++ PS++EIV+VLE
Subjt:  QTKGFEKQVIVQ-LIKESHSPLPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLRSLCTLVHLSPPSKQEIVEVLE

Query:  FIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLM-------DVHVQTLVD
        F+AK++   L +  A RIA+ S  +LR+AI SLE    ++  F  ++      WE+ +A++A  +++EQSPK    +   +Y +       +V ++ L+ 
Subjt:  FIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSL---IYLM-------DVHVQTLVD

Query:  ELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK
        EL K LD EL+  V  + A Y   E +  +G++                        IE F+AKFMS YK
Subjt:  ELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACAGCAACAACAAGAACAACCCAACCCATCCCTTCGTCGTTCCTTGTCAGATTCCGACCACCGCCGTCGCCGTCGCCGTGCCACCATCTCAACGACG
TCGTCAAAATCCTCATGGAGTTCAAAGCTAGGAAAACTCCTTGCCCGTTTATCCCTTTTCTCTCGAGACTCCGACCTGACTGAAGAAAGCCTTGAAGCCCATAAC
AAACGAATAAACTACCTCGATACCCTCGACAAAACCCCCAAAACTAGCCCTTACTACCGTGGACTTACCGATTCCTCCCTCGCCATTAATTACCATTATGGCCCT
CTCAATTCTACTTCCTTCCACGTCACCACCACTACTCCTCGTGGTCCCCACAGTTATGCCAACTCAGCAGCCACCTCAACTCAATCCTCCCTCGTCTCCAAATTC
AAAGACTACTGGGCCCCATGCCTCGGGAAACAACAACCACACCAACCACCCAGTATTCCCCACAATTCTAACTCCAAAGTGCCACATCATCATCAGAGAATCCAG
ACGGTTACGACGACGACGGTTGTGGCAAAAACGGCGTCGTTGAGATCGACGTCAGCGAATAATAATAATAAGGAGGAGGAGGAGATAAGGGAAAATCGTGATGAC
GCTGAAAGGAAGAAGCTGTTGAGGGAGAGATTAGTATCGAACGGCGGTCGGCGAGGAGACGGTGGCGGAGTGGCGGTGGTGGTGGAGATGGAAAAAGAGACGTAT
AGTTGGGGGGATAAGTATAGGCCAAAAGTGTTGGAGGATTTTATATGCAATAAAAAAAGGGCAATGGAATTGAAGGAAATGGTTAAGGAAAAAGGATGTGGGCAT
TATTATATATTTGAAGGGGCGCCTGGAGTTGGGAAGAGGACTATGATTCAAGCCATGCTTCGTCAAGCTTTTGGAGATCAACCAATGGAGATCAAGGAAGTTGTC
AAGGTTTTTGACTTGAAGAGTGAAATGTTGGGGAGCATAGAAGTTAAGGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGCTTTGAG
AAACAAGTCATTGTCCAGCTCATCAAAGAATCTCACTCCCCTTTGCCATGTAATCATACCAATTGTCGAGGGATATTGTTATGTGAAGCAGATCAACTATCAAAT
GAAACCCTAATGTATGTAAAATGGGCAATTGAAAGGAACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGATCTCTC
TGCACTCTTGTTCACCTCTCCCCTCCTTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAACGATTGGCTGAG
AGAATTGCCGACAATTCCAAGAACAACCTCCGACAAGCCATTCGATCCTTAGAGGCTTCGTGGAAAAAAAGTCGATTGTTTGAAGAAGATGAGAATAAATTATTG
ACGGGTTGGGAAGATGATATTGCGGATGTTGCTAAGAAGATAGTCGAGGAGCAAAGCCCAAAACATTTTCTCTCTCTCATTTATCTAATGGATGTTCATGTGCAG
ACTCTAGTAGATGAATTAAAGAAGTTTTTAGACGAAGAATTACAACGTCGAGTTGAAAGTTTCTATGCTGATTATAATAAAATGGAGGAAAAGTCATTTGTTGGT
GAAAGAGGCAGTGGGGAAGAGGCAGTGGTCAAAGGGCAGCATGATCCTATGCGAAAGAATGTTAACCACTTCTTGAAGATTGAAGAATTTATAGCGAAGTTCATG
AGCTGCTATAAGGGAGAAGCAAATGCCATGAAAATAAATAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAAATCTCAACCTTTTCTCTCCTCTCCTCCGTCGCCGCCGCCACAACCTCCGCCTTCCAACTTGACCATCATCTCTCTCCATGGCCACACAGCAACAA
CAAGAACAACCCAACCCATCCCTTCGTCGTTCCTTGTCAGATTCCGACCACCGCCGTCGCCGTCGCCGTGCCACCATCTCAACGACGTCGTCAAAATCCTCATGG
AGTTCAAAGCTAGGAAAACTCCTTGCCCGTTTATCCCTTTTCTCTCGAGACTCCGACCTGACTGAAGAAAGCCTTGAAGCCCATAACAAACGAATAAACTACCTC
GATACCCTCGACAAAACCCCCAAAACTAGCCCTTACTACCGTGGACTTACCGATTCCTCCCTCGCCATTAATTACCATTATGGCCCTCTCAATTCTACTTCCTTC
CACGTCACCACCACTACTCCTCGTGGTCCCCACAGTTATGCCAACTCAGCAGCCACCTCAACTCAATCCTCCCTCGTCTCCAAATTCAAAGACTACTGGGCCCCA
TGCCTCGGGAAACAACAACCACACCAACCACCCAGTATTCCCCACAATTCTAACTCCAAAGTGCCACATCATCATCAGAGAATCCAGACGGTTACGACGACGACG
GTTGTGGCAAAAACGGCGTCGTTGAGATCGACGTCAGCGAATAATAATAATAAGGAGGAGGAGGAGATAAGGGAAAATCGTGATGACGCTGAAAGGAAGAAGCTG
TTGAGGGAGAGATTAGTATCGAACGGCGGTCGGCGAGGAGACGGTGGCGGAGTGGCGGTGGTGGTGGAGATGGAAAAAGAGACGTATAGTTGGGGGGATAAGTAT
AGGCCAAAAGTGTTGGAGGATTTTATATGCAATAAAAAAAGGGCAATGGAATTGAAGGAAATGGTTAAGGAAAAAGGATGTGGGCATTATTATATATTTGAAGGG
GCGCCTGGAGTTGGGAAGAGGACTATGATTCAAGCCATGCTTCGTCAAGCTTTTGGAGATCAACCAATGGAGATCAAGGAAGTTGTCAAGGTTTTTGACTTGAAG
AGTGAAATGTTGGGGAGCATAGAAGTTAAGGTGAAAGAATCATCTCATTACGTGGAAGTCAATATGTCACAAACCAAAGGCTTTGAGAAACAAGTCATTGTCCAG
CTCATCAAAGAATCTCACTCCCCTTTGCCATGTAATCATACCAATTGTCGAGGGATATTGTTATGTGAAGCAGATCAACTATCAAATGAAACCCTAATGTATGTA
AAATGGGCAATTGAAAGGAACAAAGGTTGCAGCAAAATCTTCTTCTGCTGTTCTGATGCCTCTAAGCTTCTCCTTCTTAGATCTCTCTGCACTCTTGTTCACCTC
TCCCCTCCTTCAAAACAAGAGATTGTGGAAGTGTTGGAGTTCATAGCAAAACAACAAGGATTCGACTTGTCGAAACGATTGGCTGAGAGAATTGCCGACAATTCC
AAGAACAACCTCCGACAAGCCATTCGATCCTTAGAGGCTTCGTGGAAAAAAAGTCGATTGTTTGAAGAAGATGAGAATAAATTATTGACGGGTTGGGAAGATGAT
ATTGCGGATGTTGCTAAGAAGATAGTCGAGGAGCAAAGCCCAAAACATTTTCTCTCTCTCATTTATCTAATGGATGTTCATGTGCAGACTCTAGTAGATGAATTA
AAGAAGTTTTTAGACGAAGAATTACAACGTCGAGTTGAAAGTTTCTATGCTGATTATAATAAAATGGAGGAAAAGTCATTTGTTGGTGAAAGAGGCAGTGGGGAA
GAGGCAGTGGTCAAAGGGCAGCATGATCCTATGCGAAAGAATGTTAACCACTTCTTGAAGATTGAAGAATTTATAGCGAAGTTCATGAGCTGCTATAAGGGAGAA
GCAAATGCCATGAAAATAAATAAATAAATAAATAATCTCAACCTTTGAAAGGTTGGTGCTCGGGAAAAAAGTCACATTTGAATTTTCCCCTTGGTATAAATATCA
GATTCTTGCTTAATATATATTTACACGCAAACTTATAAATATTACTTGCCATGTAATATTACTTGAATCTGTTTTCAAGGTGTGTGGAG
Protein sequenceShow/hide protein sequence
MATQQQQEQPNPSLRRSLSDSDHRRRRRRATISTTSSKSSWSSKLGKLLARLSLFSRDSDLTEESLEAHNKRINYLDTLDKTPKTSPYYRGLTDSSLAINYHYGP
LNSTSFHVTTTTPRGPHSYANSAATSTQSSLVSKFKDYWAPCLGKQQPHQPPSIPHNSNSKVPHHHQRIQTVTTTTVVAKTASLRSTSANNNNKEEEEIRENRDD
AERKKLLRERLVSNGGRRGDGGGVAVVVEMEKETYSWGDKYRPKVLEDFICNKKRAMELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVV
KVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLIKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLRSL
CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKHFLSLIYLMDVHVQ
TLVDELKKFLDEELQRRVESFYADYNKMEEKSFVGERGSGEEAVVKGQHDPMRKNVNHFLKIEEFIAKFMSCYKGEANAMKINK