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CcUC05G084190 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G084190
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description10 kDa chaperonin
Genome locationCicolChr05:2688776..2691746
RNA-Seq ExpressionCcUC05G084190
SyntenyCcUC05G084190
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133964.1 10 kDa chaperonin 1, chloroplastic [Cucumis sativus]2.8e-5989.36Show/hide
Query:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAMASTF TVPKPFIN PN+S SVS RRLI GGLRSS L VSAISKK EPAKVVPQADRVLVRLEELPEKS GGVLLPKSAVKFERYLVG ILSVGT+VG
Subjt:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
         NDI PGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLA+VE
Subjt:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

XP_008438275.1 PREDICTED: 10 kDa chaperonin isoform X1 [Cucumis melo]2.3e-6192.2Show/hide
Query:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAMASTF+TVPKPFIN PN+S SVSARRLIIGGLRSSTL VSAIS+K EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVG +VG
Subjt:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
         NDI PGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
Subjt:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

XP_022936135.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]1.2e-5481.43Show/hide
Query:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MAMASTFVTVPKPF +  NSSSVS+R+ I GG R S+L VSA+SKK EP KVVPQADRVL+RLEELPEKSAGGVLLPKSAVKFER+LVGEILS+G++VG 
Subjt:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        +D+ PGKKV+LSDINAYEVDLGTDAKHCFCKA DLLAVVE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

XP_022974766.1 10 kDa chaperonin 1, chloroplastic-like isoform X1 [Cucurbita maxima]8.5e-5682.86Show/hide
Query:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MAMASTFVTVPKPF +  NSSSVS+RRLI GG R S+L VSA+SKK EP KVVPQADRVL+RLEELPEKSAGGVLLPKSAVKFER+LVGEILS+G++VG 
Subjt:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        +D+ PGKKV+LSDINAYEVDLGTDAKHCFCKA DLLAVVE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

XP_038880425.1 10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]1.9e-6395Show/hide
Query:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MAMASTFVTVPK  INRPNS SVSARRLIIGGLRSSTL VSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG 
Subjt:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        NDI PGKKVLLSD+NAYEVDLGTDAKHCFCKAGDLLAVVE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

TrEMBL top hitse value%identityAlignment
A0A0A0L6L9 Uncharacterized protein1.4e-5989.36Show/hide
Query:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAMASTF TVPKPFIN PN+S SVS RRLI GGLRSS L VSAISKK EPAKVVPQADRVLVRLEELPEKS GGVLLPKSAVKFERYLVG ILSVGT+VG
Subjt:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
         NDI PGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLA+VE
Subjt:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

A0A1S3AWL8 10 kDa chaperonin isoform X11.1e-6192.2Show/hide
Query:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAMASTF+TVPKPFIN PN+S SVSARRLIIGGLRSSTL VSAIS+K EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVG +VG
Subjt:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
         NDI PGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
Subjt:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

A0A5D3CZW2 10 kDa chaperonin isoform X11.1e-6192.2Show/hide
Query:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAMASTF+TVPKPFIN PN+S SVSARRLIIGGLRSSTL VSAIS+K EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVG +VG
Subjt:  MAMASTFVTVPKPFINRPNSS-SVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
         NDI PGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
Subjt:  ENDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

A0A6J1FCS3 10 kDa chaperonin 1, chloroplastic-like5.9e-5581.43Show/hide
Query:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MAMASTFVTVPKPF +  NSSSVS+R+ I GG R S+L VSA+SKK EP KVVPQADRVL+RLEELPEKSAGGVLLPKSAVKFER+LVGEILS+G++VG 
Subjt:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        +D+ PGKKV+LSDINAYEVDLGTDAKHCFCKA DLLAVVE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

A0A6J1ICA1 10 kDa chaperonin 1, chloroplastic-like isoform X14.1e-5682.86Show/hide
Query:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MAMASTFVTVPKPF +  NSSSVS+RRLI GG R S+L VSA+SKK EP KVVPQADRVL+RLEELPEKSAGGVLLPKSAVKFER+LVGEILS+G++VG 
Subjt:  MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        +D+ PGKKV+LSDINAYEVDLGTDAKHCFCKA DLLAVVE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

SwissProt top hitse value%identityAlignment
A5GNB0 10 kDa chaperonin1.7e-0637Show/hide
Query:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGEND-------IVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV
        L  + V P  DRV V++ E  EK+AGG+LLP +A   E+  VGE++ VG      D       +  G KVL S     ++ LG+D ++      D+LAVV
Subjt:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGEND-------IVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV

O80504 10 kDa chaperonin 2, chloroplastic4.0e-4063.57Show/hide
Query:  MASTFV-TVPKPFINRP-NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MASTFV ++P PF   P  +++ S     + G R   L + AIS K EP KVVPQADRVLVRLE+LP KS+GGVLLPK+AVKFERYL GEI+SVG++VG+
Subjt:  MASTFV-TVPKPFINRP-NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
          + PGK+VL SD++AYEVDLGTDA+HCFCK  DLLA+VE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

Q0I7U2 10 kDa chaperonin1.3e-0637Show/hide
Query:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGEND-------IVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV
        L  + V P  DRV V++ E  EK+AGG+LLP +A   E+  VGE++ VG     +D       +  G KVL S     ++ LG+D ++      D+LAVV
Subjt:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGEND-------IVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV

Q2JL42 10 kDa chaperonin2.2e-0636.63Show/hide
Query:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDV--GENDIVP-----GKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV
        L  + + P  DRVLV++ +  EK+AGG+ LP +A   E+  VGE+++VG      E  ++P     G KVL S     EV LG+D ++      D+LA+V
Subjt:  LEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDV--GENDIVP-----GKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVV

Query:  E
        +
Subjt:  E

Q9M1C2 10 kDa chaperonin 1, chloroplastic5.0e-4364.79Show/hide
Query:  MASTFVTVPKPFINRP---NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAS+F+TVPKPF++ P   N+ ++  + L+  G+R ++  ++A+S K EPAKVVPQADRVLVRLE LPEKS+GGVLLPKSAVKFERYL GE++SVG++VG
Subjt:  MASTFVTVPKPFINRP---NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGT-DAKHCFCKAGDLLAVVE
        E  + PGKKVL SD++AYEVD GT DAKHCFCK  DLLA+V+
Subjt:  ENDIVPGKKVLLSDINAYEVDLGT-DAKHCFCKAGDLLAVVE

Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 102.8e-4163.57Show/hide
Query:  MASTFV-TVPKPFINRP-NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE
        MASTFV ++P PF   P  +++ S     + G R   L + AIS K EP KVVPQADRVLVRLE+LP KS+GGVLLPK+AVKFERYL GEI+SVG++VG+
Subjt:  MASTFV-TVPKPFINRP-NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGE

Query:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
          + PGK+VL SD++AYEVDLGTDA+HCFCK  DLLA+VE
Subjt:  NDIVPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

AT3G60210.1 GroES-like family protein3.6e-4464.79Show/hide
Query:  MASTFVTVPKPFINRP---NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG
        MAS+F+TVPKPF++ P   N+ ++  + L+  G+R ++  ++A+S K EPAKVVPQADRVLVRLE LPEKS+GGVLLPKSAVKFERYL GE++SVG++VG
Subjt:  MASTFVTVPKPFINRP---NSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVG

Query:  ENDIVPGKKVLLSDINAYEVDLGT-DAKHCFCKAGDLLAVVE
        E  + PGKKVL SD++AYEVD GT DAKHCFCK  DLLA+V+
Subjt:  ENDIVPGKKVLLSDINAYEVDLGT-DAKHCFCKAGDLLAVVE

AT5G20720.1 chaperonin 203.5e-0735.11Show/hide
Query:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV
        +SSV    L  G LR S    L V A S    +   + P  DRVLV+++E  EK+ GG+LLP +A    +   GE+++V  G  +G+N I   VP G ++
Subjt:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV

Query:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        + S     EV+   D KH   K  D++ ++E
Subjt:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

AT5G20720.2 chaperonin 203.5e-0735.11Show/hide
Query:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV
        +SSV    L  G LR S    L V A S    +   + P  DRVLV+++E  EK+ GG+LLP +A    +   GE+++V  G  +G+N I   VP G ++
Subjt:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV

Query:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        + S     EV+   D KH   K  D++ ++E
Subjt:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE

AT5G20720.3 chaperonin 203.5e-0735.11Show/hide
Query:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV
        +SSV    L  G LR S    L V A S    +   + P  DRVLV+++E  EK+ GG+LLP +A    +   GE+++V  G  +G+N I   VP G ++
Subjt:  SSSVSARRLIIGGLRSS---TLTVSAISKKL-EPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSV--GTDVGENDI---VP-GKKV

Query:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE
        + S     EV+   D KH   K  D++ ++E
Subjt:  LLSDINAYEVDLGTDAKHCFCKAGDLLAVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGCGTCTACGTTCGTCACAGTGCCAAAGCCCTTCATCAATAGGCCTAATTCATCTTCCGTATCTGCACGGCGACTAATAATCGGAGGATTGCGAAGT
AGCACTTTGACAGTCAGCGCAATTTCTAAGAAATTGGAGCCTGCGAAGGTGGTTCCTCAAGCTGATAGAGTTCTCGTCCGTCTTGAGGAGCTTCCTGAGAAATCA
GCTGGTGGAGTTTTGCTGCCTAAATCAGCTGTCAAATTTGAGCGGTATCTTGTAGGAGAGATTCTATCCGTCGGAACAGACGTTGGAGAAAATGATATTGTACCT
GGAAAAAAGGTTCTTTTATCCGACATAAATGCTTATGAGGTGGATTTGGGCACAGATGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAG
TAG
mRNA sequenceShow/hide mRNA sequence
TATCTTACTTGTAGTTCGTTAGAATTAAGAACGCTCTAGAATTTCTCTTCCCTCGCTAAATCGTTTCTCCCGCCCACCTCACTCGATTCCCACAGAGTTCTACTT
CTTCTTCGACTAGATTCATGGCGATGGCGTCTACGTTCGTCACAGTGCCAAAGCCCTTCATCAATAGGCCTAATTCATCTTCCGTATCTGCACGGCGACTAATAA
TCGGAGGATTGCGAAGTAGCACTTTGACAGTCAGCGCAATTTCTAAGAAATTGGAGCCTGCGAAGGTGGTTCCTCAAGCTGATAGAGTTCTCGTCCGTCTTGAGG
AGCTTCCTGAGAAATCAGCTGGTGGAGTTTTGCTGCCTAAATCAGCTGTCAAATTTGAGCGGTATCTTGTAGGAGAGATTCTATCCGTCGGAACAGACGTTGGAG
AAAATGATATTGTACCTGGAAAAAAGGTTCTTTTATCCGACATAAATGCTTATGAGGTGGATTTGGGCACAGATGCTAAGCACTGCTTCTGTAAAGCTGGTGATT
TGTTAGCTGTGGTTGAGTAGAGAAGCTTCCTCCAACACTACAATGCACATCCACATCAGTTCTTTTCACTCAGATTAGTTCTCTTTCCTGATTGTCATTTGCTTG
TTATCTCGTTTTATTTTCGTTTTTATTGATCTGTGTGACCTGTATAAAGATGTTAGTTATTCTCACTAGGAAGAATACCTTCGATTATTTTTTAAAAATTAGTCA
ACCTTAAAAG
Protein sequenceShow/hide protein sequence
MAMASTFVTVPKPFINRPNSSSVSARRLIIGGLRSSTLTVSAISKKLEPAKVVPQADRVLVRLEELPEKSAGGVLLPKSAVKFERYLVGEILSVGTDVGENDIVP
GKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE