; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G084330 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G084330
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L37a
Genome locationCicolChr05:2790384..2792698
RNA-Seq ExpressionCcUC05G084330
SyntenyCcUC05G084330
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7137563.1 hypothetical protein RHSIM_Rhsim07G0119700 [Rhododendron simsii]1.3e-3768.89Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        +TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK     C  ++ +V                            + YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAF8390832.1 hypothetical protein HHK36_023131 [Tetracentron sinense]1.0e-3770.15Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                          +F L+   N+  +F + YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KDC KVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

KAG6504215.1 hypothetical protein ZIOFF_036546 [Zingiber officinale]9.1e-3971.85Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK +    Y +H +V         I  +IF L+    ++   +  +AVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KVH88611.1 hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus]2.0e-3869.63Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                             L ++ N        YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

ONM18159.1 60S ribosomal protein L37a-2 [Zea mays]6.9e-3968.57Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDN--VISIFIIL---YAVKRKAV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK       +      V+L+A+ +       LI   +  ++  F +L   +AVKRKAV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDN--VISIFIIL---YAVKRKAV

Query:  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hitse value%identityAlignment
A0A103XDD5 Uncharacterized protein9.8e-3969.63Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                             L ++ N        YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A1D6ECX8 60S ribosomal protein L37a-23.4e-3968.57Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDN--VISIFIIL---YAVKRKAV
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK       +      V+L+A+ +       LI   +  ++  F +L   +AVKRKAV
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDN--VISIFIIL---YAVKRKAV

Query:  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        GIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  GIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A1U7XSD1 60S ribosomal protein L37a2.4e-3768.15Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                                           YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A200Q8W6 Ribosomal protein L37ae1.4e-3768.66Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK      ++SH                                 YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

A0A6J1ICH2 60S ribosomal protein L37a2.4e-3768.15Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                                           YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-17.2e-3965.93Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                                           +AVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-27.2e-3965.93Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                                           +AVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-11.4e-3764.44Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK                                           Y+VKRK VGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a5.5e-3967.41Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK                                           YAVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        K CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a4.7e-3865.67Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK                                           +AVKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein9.7e-3964.44Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK                                           Y+VKRK VGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein4.8e-3863.43Show/hide
Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC
        M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGK                                           Y VKRKAVGIWGC
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGC

Query:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAAAGAACCAAGAAGGCTGGCATTGTCGGCAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAGATTAAGAAGATGGAAGTCAGCCAGCACAGCAAATA
CTTCTGCGAGTTCTGCGGAAAGAAAATAGAAAATTATTGCTATTATTCTCATGATCTTGTTAAAGTAGTTCTCGAAGCCATGGAATTAATTCAGAAGTATATTTTTCCCT
TAATAGAGAAGGACAATGTTATTAGTATCTTTATCATATTGTATGCCGTAAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGCGGAAAGGTTAAAGCGGGAGGT
GCCTACACATTGAACACTGCAAGTGCGGTGACTGTTAGGAGCACAATTCGAAGGTTGAGGGAGCAGACTGAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
CTTGGCCGTTCAGTCTCTGCACCAGCGTCTCTCTAGAGGTGTCATCGTCGCTTCAAAGCCTCAACAATGACGAAAAGAACCAAGAAGGCTGGCATTGTCGGCAAATACGG
TACCAGATATGGTGCTAGTTTGAGGAAGCAGATTAAGAAGATGGAAGTCAGCCAGCACAGCAAATACTTCTGCGAGTTCTGCGGAAAGAAAATAGAAAATTATTGCTATT
ATTCTCATGATCTTGTTAAAGTAGTTCTCGAAGCCATGGAATTAATTCAGAAGTATATTTTTCCCTTAATAGAGAAGGACAATGTTATTAGTATCTTTATCATATTGTAT
GCCGTAAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGCGGAAAGGTTAAAGCGGGAGGTGCCTACACATTGAACACTGCAAGTGCGGTGACTGTTAGGAGCAC
AATTCGAAGGTTGAGGGAGCAGACTGAGAGTTAAGTTAGATTTATATTTCGTTTTCCTTCTGTGTTGAGTTATATTACCGGTTTGATAGTGTAGAGTTCTTGGAAGAAGA
TTGTTCTGAGCAATTTGACTTCATTTCAAGTTGGGACTCCAGAGCTTTTATTGAACTAGCTCTGCTTTTTTAGCCAGATTATTTGAAAGAAGTATCCTGGATTTTTGGGG
CACATCTCTACTTTTTGCCCACCTGCACAATTCTTTCTTGTTTATGTATTTTCATCTTTTGGTATTTGATATCTTATTGCATCTCAGACCATCGTTTTATTTTCA
Protein sequenceShow/hide protein sequence
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKKIENYCYYSHDLVKVVLEAMELIQKYIFPLIEKDNVISIFIILYAVKRKAVGIWGCKDCGKVKAGG
AYTLNTASAVTVRSTIRRLREQTES