; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G084830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G084830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionVesicle-associated membrane protein
Genome locationCicolChr05:3234393..3234959
RNA-Seq ExpressionCcUC05G084830
SyntenyCcUC05G084830
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACU16566.1 unknown [Glycine max]4.1e-0854.24Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        +ESV+DE+++GVA+ +VGELVV   +LLEAL  D  E+  E  +LGE+HR++ HE VDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

ACU18757.1 unknown [Glycine max]4.1e-0854.24Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        +ESV+DE+++GVA+ +VGELVV   +LLEAL  D  E+  E  +LGE+HR++ HE VDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

RDX98750.1 hypothetical protein CR513_18287, partial [Mucuna pruriens]2.2e-0959.32Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T+SV+DE+++GV +A+VGELVV   K LEALR  A E+ GEL +LGEDH ++S E VDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

RRT68514.1 hypothetical protein B296_00009890 [Ensete ventricosum]2.8e-0961.02Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T SVLDE+I+GVA+A++GELVV SG+LL+AL  DA E+  EL +L +DHR+   EAVDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

RWW09320.1 hypothetical protein GW17_00027190 [Ensete ventricosum]2.8e-0961.02Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T SVLDE+I+GVA+A++GELVV SG+LL+AL  DA E+  EL +L +DHR+   EAVDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

TrEMBL top hitse value%identityAlignment
A0A2P2JY15 Vesicle-associated membrane protein1.2e-0855.17Show/hide
Query:  ESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        E++ +E+I+GVA+A+VG+ V+ SG+ LEALR DA EI GEL +  ++HR+  HEAVDQ
Subjt:  ESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

A0A371H7I2 Uncharacterized protein (Fragment)1.0e-0959.32Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T+SV+DE+++GV +A+VGELVV   K LEALR  A E+ GEL +LGEDH ++S E VDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

A0A426ZX05 Uncharacterized protein1.4e-0961.02Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T SVLDE+I+GVA+A++GELVV SG+LL+AL  DA E+  EL +L +DHR+   EAVDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

A0A444EG05 Uncharacterized protein1.4e-0961.02Show/hide
Query:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        T SVLDE+I+GVA+A++GELVV SG+LL+AL  DA E+  EL +L +DHR+   EAVDQ
Subjt:  TESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

A0A5K0ZLL2 Uncharacterized protein (Fragment)2.0e-0853.33Show/hide
Query:  RTESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ
        RTE+ +D++++G+++A+V E VV  G+LLEALR D  EI  +LR+LG+D+   SHEAVDQ
Subjt:  RTESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGTACTGAATCCGTTCTCGACGAGATAATTAAAGGTGTGGCCATCGCAATTGTAGGTGAACTTGTTGTTCGAAGCGGGAAGCTTCTGGAGGCATTGAGAAGCGA
CGCTAGTGAAATTACCGGTGAACTCCGTATACTCGGCGAGGATCACCGTTCCTCGAGCCACGAAGCTGTAGATCAACTTAGGAACTGTAAGGGAGCATTACGAACGTCGG
TTGAGACTTCGGACTGTACGAACAAAAATATTTTCAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGTACTGAATCCGTTCTCGACGAGATAATTAAAGGTGTGGCCATCGCAATTGTAGGTGAACTTGTTGTTCGAAGCGGGAAGCTTCTGGAGGCATTGAGAAGCGA
CGCTAGTGAAATTACCGGTGAACTCCGTATACTCGGCGAGGATCACCGTTCCTCGAGCCACGAAGCTGTAGATCAACTTAGGAACTGTAAGGGAGCATTACGAACGTCGG
TTGAGACTTCGGACTGTACGAACAAAAATATTTTCAAATTTTAA
Protein sequenceShow/hide protein sequence
MKRTESVLDEIIKGVAIAIVGELVVRSGKLLEALRSDASEITGELRILGEDHRSSSHEAVDQLRNCKGALRTSVETSDCTNKNIFKF