; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G084980 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G084980
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionS-protein homolog
Genome locationCicolChr05:3381867..3383776
RNA-Seq ExpressionCcUC05G084980
SyntenyCcUC05G084980
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-7090.28Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK
        MIMKIL+ ILMLI FP FTVF+SLLP EQLYGIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLD  RK
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK

Query:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SFDAFKVPRDIYRCS LRKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]1.9e-7293.75Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK
        MIMKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLD  RK
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK

Query:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]1.8e-7093.01Show/hide
Query:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCARKS
        MKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLD  RKS
Subjt:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCARKS

Query:  FDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]4.7e-7193.1Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR
        MIMKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLD  R
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR

Query:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]5.6e-7294.37Show/hide
Query:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSF
        MKILI ILMLIFFP F+VFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLD  RKSF
Subjt:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSF

Query:  DAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hitse value%identityAlignment
A0A0A0L6V3 S-protein homolog2.4e-6094.07Show/hide
Query:  EQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCARKSFDAFKVPRDIYRCSTLRKCSWLVME
        EQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLD  RKSFDAFKVPRDIYRCS LRKCSWLVME
Subjt:  EQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCARKSFDAFKVPRDIYRCSTLRKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog2.3e-7193.1Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR
        MIMKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLD  R
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR

Query:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog2.3e-7193.1Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR
        MIMKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLD  R
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDCAR

Query:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KSFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  KSFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog9.3e-7393.75Show/hide
Query:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK
        MIMKIL+ ILMLIFFP FTVFVSLLPAEQL+GIEYEVRVI+GFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLD  RK
Subjt:  MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARK

Query:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SFDAFKVPRDIYRCS LRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  SFDAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog8.1e-6990.14Show/hide
Query:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSF
        MKILI ILMLIFFP FTVF+SLLP + LYGIEYEVRVI+GFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLD  R+SF
Subjt:  MKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSF

Query:  DAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCS  RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family3.0e-0732.95Show/hide
Query:  TNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFDAFKVPRD---IYRCSTLRKCSWLVMEDG
        T N    LV+ C +K  D+G  AL+  +   +  + N   TTT  ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  TNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFDAFKVPRD---IYRCSTLRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family1.9e-3853.9Show/hide
Query:  ILIGILMLIFFPLFTVFVSLL-PAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFD
        I++ + MLI   L  +F  +L P     G E++VRVI+ F +NSSLPLVIWC S   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK F+
Subjt:  ILIGILMLIFFPLFTVFVSLL-PAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFD

Query:  AFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW
        AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSW

AT4G16195.1 Plant self-incompatibility protein S1 family3.1e-0428.43Show/hide
Query:  SSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFDAFKVPRDI---YRCSTLRKCSWLVMEDG-FYFSDDEVNWKKDF
        + L L+  C SKD D+G R LQ  + +S+     F+  T   + C+        SFD +K  RD     +C + R C W +  +G   F+D+   +   +
Subjt:  SSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFDAFKVPRDI---YRCSTLRKCSWLVMEDG-FYFSDDEVNWKKDF

Query:  SW
         W
Subjt:  SW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATGAAGATTCTCATCGGCATTCTGATGCTCATTTTCTTCCCACTCTTTACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATCGAATAC
GAAGTGCGTGTGATCAGTGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCAAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCAT
GATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACTGTGCAAGGAAGAGTTTTGATGCATTC
AAGGTACCAAGAGATATCTATCGCTGTAGTACTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAG
GATTTCTCGTGGGCAGGTCCTCGATTCTACGCTAAAGATTTGCCTGACATGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATGAAGATTCTCATCGGCATTCTGATGCTCATTTTCTTCCCACTCTTTACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATCGAATAC
GAAGTGCGTGTGATCAGTGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCAAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCAT
GATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACTGTGCAAGGAAGAGTTTTGATGCATTC
AAGGTACCAAGAGATATCTATCGCTGTAGTACTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAG
GATTTCTCGTGGGCAGGTCCTCGATTCTACGCTAAAGATTTGCCTGACATGATTTAG
Protein sequenceShow/hide protein sequence
MIMKILIGILMLIFFPLFTVFVSLLPAEQLYGIEYEVRVISGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDCARKSFDAF
KVPRDIYRCSTLRKCSWLVMEDGFYFSDDEVNWKKDFSWAGPRFYAKDLPDMI