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CcUC05G085100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G085100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:3446165..3449652
RNA-Seq ExpressionCcUC05G085100
SyntenyCcUC05G085100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI37230.3 unnamed protein product, partial [Vitis vinifera]4.9e-0751.85Show/hide
Query:  IRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTRSIIPNQYAIPPNAKSAIPISSPPKNFLLPPSNPHSSTVLSIS
        I   SGR SLITG +L     A  RGN S+S +FTP   S++ +  AI P A SA PISSPPKNF  P   P SS +LS S
Subjt:  IRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTRSIIPNQYAIPPNAKSAIPISSPPKNFLLPPSNPHSSTVLSIS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGCTCCCTCCGGCGCCGGAAAGCCGCCGCCATTAGGTTCCAATCCGGCAGATTATCTCTGATCACCGGCGCTTCCCTGAATCTTCCAGCCCAAGCATACACCCG
AGGGAACTCATCGGCGTCCAACACTTTCACTCCCGTCACTCGTTCAATCATTCCCAACCAATACGCAATCCCGCCGAACGCCAAATCCGCCATTCCGATCTCATCTCCGC
CGAAAAATTTCCTTCTTCCGCCGTCGAATCCCCATTCCTCGACGGTTCTCAGCATCTCCAAGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGCTCCCTCCGGCGCCGGAAAGCCGCCGCCATTAGGTTCCAATCCGGCAGATTATCTCTGATCACCGGCGCTTCCCTGAATCTTCCAGCCCAAGCATACACCCG
AGGGAACTCATCGGCGTCCAACACTTTCACTCCCGTCACTCGTTCAATCATTCCCAACCAATACGCAATCCCGCCGAACGCCAAATCCGCCATTCCGATCTCATCTCCGC
CGAAAAATTTCCTTCTTCCGCCGTCGAATCCCCATTCCTCGACGGTTCTCAGCATCTCCAAGCTCTGATTCTTCGCAACCTCCCGTTCTTCCTCATTCTTCGCACGAAAT
ATCATAAAAATCGCCGAGCCCTAAAATTACAAAACCACCAATCAAATTCAATTAAGTATGTAATTTCGATTTGTGAACATCATGGTTGTACCTTATCCTCAATGAATTTG
ATCCAGAATCGAGCGGTGGCTCTTTCGAAAGGATCGGAAGGCAGCAAGGGATTTTGCGGCCATGTTTCTTCGACGTACTCGAGAATGATCATGGATTCGCAGATAGGGTT
TCCGGCATGGACGAGCACTGGAATTTTCTTGTGAACGGGATTGTACTGTAAGAGTAGAGGGCTTTTGTTGGCGAGATCTTCTTCTATGTATTCGTATGGAATGCCTTTGA
GAGCCAGAGCCCAAATGACTCTGTAAGAGTAAGGGCTTGGCCAAGTTCCATGGAGCTTCACTTCTGTCATCTTCAATGGAGGATTTTCAAGTTCAAGAACTGAGTGAATC
GCTTTTGCAGTGCTTTTTCTTTGGCCTTCAAGAATCGTTTTTATAGTGCTTTTTCTTGGGCTTCAAGAATCAAAGCTATGGAAAATTCATCCAAAATGGTTTAAAATATA
CCAAGCGTCCTTGAATTATTTGCTCCATTTATTCCTTAATTAAATACTAAAACACTTTTAAATTACTGACTTAGGTTTGAATAGGATGACAAAATGAGCGTATGTTAATT
GTCATTAGTGTGACCACTCGTATGTGTTCAAATCTTCTTATTCTCAATTGATTGTTAACTGATTTTTAAAAAATGTACTTAAATGAACTCCACGTTTACTAAAAAATCAC
TAACCAAATAAGGACTAAATTTTTAATTTCGAGTTTAGTACATTCTATGAAAATGTTGGGTACATTCATAAACTTTCAATTTTATATCAAATGGTTTCAAATATATTTAA
TTTTTTTATATAAAAAAAATTCAATTGTATTGTTATACATACAATTTAATTTTGCGATGAATTGACCTTTAAGATTTGAATTTTGAAACTAATAATTACATCAAATTTTA
AATAAACATCTCATAAAACTTATTAGATAAAATGTTAAATTTTTATATATATATGATATAATATTTAATTTTAACATTTTCAAATATTTAAGAGACATATTAAATACAAA
ATTGAAAGCATTAGGAATATATTAGATTGAAATCGAGAATTTAGAATATTATAAAGACACATTTTAAACTTCATAAACCATATATAGACACAAATAAATTTATGAGCTAT
TTGTACCCCTAACATAAAATTATAGATATGCCCATAAGTAAAAAAAAAAAATGAAAAATAGAACAAAATGGGTGTAAAAGACCCTTTAGAATTAACTCAACTATAAAGAT
TGAAAATCAAAACTTTGAAGATTATAAACTATGGAGACCAACTGAAGACTCATAAAACCGTACGAATTCAATCAAAATTATGTTATGATTGAAATTGTAAATCGTTAAAA
TATTGGAAAAATAAAG
Protein sequenceShow/hide protein sequence
MICSLRRRKAAAIRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTRSIIPNQYAIPPNAKSAIPISSPPKNFLLPPSNPHSSTVLSISKL