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CcUC05G086060 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G086060
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionAT-hook motif nuclear-localized protein 20-like
Genome locationCicolChr05:4114284..4114589
RNA-Seq ExpressionCcUC05G086060
SyntenyCcUC05G086060
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0003680 - AT DNA binding (molecular function)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049279.1 hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa]4.7e-3275.25Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP
        M DAERK+A    + APTRLQSQAPASIEIKR  +WN+ IPLLSPLVSPSSCGN G E+ L MA+N AREE KGL+FTKWQHPAAPFYY PVPRA  FVP
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP

Query:  V
        V
Subjt:  V

KAE8650334.1 hypothetical protein Csa_009641 [Cucumis sativus]5.0e-3479.21Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP
        M DAERK+A    + APTRLQSQAPASIEIKRA NWN+AIPLLSPLVSPSSCGN   E+ L MAEN AREE KGL+FTKWQHPAAPFYY PVPRA PFVP
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP

Query:  V
        V
Subjt:  V

KAG6582368.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2169.41Show/hide
Query:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV
        PTRLQSQAPASI I RA NWN+AIPLL+PLVS S CGN   ++ LLM ENKAREE      TKWQHPA P Y GP+P  TPFVPV
Subjt:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV

XP_022143991.1 uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]2.1e-2463.81Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEA----KGLSFTKWQHPAAPFYYGPVPRAT
        MGDAER+ AG S SQ  TRLQ +AP+SI+I R  +WN+AIPLLSPLVSP       E+  +LM ENKAREEA    K  +FT+W+HPAAPFYYGPV R T
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEA----KGLSFTKWQHPAAPFYYGPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

XP_022924297.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata]4.1e-2072Show/hide
Query:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGP
        PTRLQSQAPASI I RA NWN+AIPLL+PLVS S CGN   ++ LLM ENKAREE KGL+ TKWQHPA PF   P
Subjt:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGP

TrEMBL top hitse value%identityAlignment
A0A0A0L8D3 Uncharacterized protein2.4e-3479.21Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP
        M DAERK+A    + APTRLQSQAPASIEIKRA NWN+AIPLLSPLVSPSSCGN   E+ L MAEN AREE KGL+FTKWQHPAAPFYY PVPRA PFVP
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A2P5FLQ7 Uncharacterized protein4.3e-1546.67Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAR----EEAKGLSFTKWQHPAAPFYYGPVPRAT
        M D  R ++G    + P+RLQ +APAS++I+   +WN+AIPLLSPL SPSS     +  A + +    R    E  K + F KWQHPAAPF Y P P   
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAR----EEAKGLSFTKWQHPAAPFYYGPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A5D3D1A6 Uncharacterized protein2.3e-3275.25Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP
        M DAERK+A    + APTRLQSQAPASIEIKR  +WN+ IPLLSPLVSPSSCGN G E+ L MA+N AREE KGL+FTKWQHPAAPFYY PVPRA  FVP
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A6J1CRZ0 uncharacterized protein At4g14450, chloroplastic-like1.0e-2463.81Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEA----KGLSFTKWQHPAAPFYYGPVPRAT
        MGDAER+ AG S SQ  TRLQ +AP+SI+I R  +WN+AIPLLSPLVSP       E+  +LM ENKAREEA    K  +FT+W+HPAAPFYYGPV R T
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEA----KGLSFTKWQHPAAPFYYGPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A6J1E8H9 AT-hook motif nuclear-localized protein 20-like2.0e-2072Show/hide
Query:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGP
        PTRLQSQAPASI I RA NWN+AIPLL+PLVS S CGN   ++ LLM ENKAREE KGL+ TKWQHPA PF   P
Subjt:  PTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGP

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic2.7e-0637Show/hide
Query:  SAGVSQSQAPTRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKA-----REEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV
        S+  S  +  ++LQ +AP+  I+     NWN+AIPLLSPL    S  +  ++  +   +NK       E  K   F KWQHPA+PF Y P     PF+ V
Subjt:  SAGVSQSQAPTRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKA-----REEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein7.1e-1041.18Show/hide
Query:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRA-PNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENK--AREEAKGLSFTKWQHPAAPFYYGPVPRAT-
        M    R  +G S ++  +RLQ +AP  ++I     NW +AIPLLSP  SP     P +  A++  E +   +E  K   F KWQHPAAPFYY P P +  
Subjt:  MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRA-PNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENK--AREEAKGLSFTKWQHPAAPFYYGPVPRAT-

Query:  PF
        PF
Subjt:  PF

AT3G23170.1 unknown protein4.1e-1044.94Show/hide
Query:  PTRLQSQAPASIEIKRAP---NWNMAIPLLSPL-VSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV
        P+RL  + PA   +   P   NWN AIPLLSPL +SP S  +P ++  +   ++ A    K   F KWQHPAAPFYY       PFVPV
Subjt:  PTRLQSQAPASIEIKRAP---NWNMAIPLLSPL-VSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV

AT4G14450.1 unknown protein1.9e-0737Show/hide
Query:  SAGVSQSQAPTRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKA-----REEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV
        S+  S  +  ++LQ +AP+  I+     NWN+AIPLLSPL    S  +  ++  +   +NK       E  K   F KWQHPA+PF Y P     PF+ V
Subjt:  SAGVSQSQAPTRLQSQAPA-SIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKA-----REEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGATGCAGAGAGAAAAAGCGCCGGCGTTTCCCAGAGCCAAGCGCCAACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCACCGAATTGGAA
CATGGCCATACCCTTGTTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATCCAGGGGAAGAGGAAGCCTTGTTGATGGCTGAGAATAAAGCGAGGGAGGAAGCCAAAG
GGCTAAGCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGATGCAGAGAGAAAAAGCGCCGGCGTTTCCCAGAGCCAAGCGCCAACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCACCGAATTGGAA
CATGGCCATACCCTTGTTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATCCAGGGGAAGAGGAAGCCTTGTTGATGGCTGAGAATAAAGCGAGGGAGGAAGCCAAAG
GGCTAAGCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGGGCCAGTCCCAAGGGCCACCCCCTTTGTGCCCGTGTGA
Protein sequenceShow/hide protein sequence
MGDAERKSAGVSQSQAPTRLQSQAPASIEIKRAPNWNMAIPLLSPLVSPSSCGNPGEEEALLMAENKAREEAKGLSFTKWQHPAAPFYYGPVPRATPFVPV