; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G086180 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G086180
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:4208615..4208920
RNA-Seq ExpressionCcUC05G086180
SyntenyCcUC05G086180
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]5.9e-3587.23Show/hide
Query:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV
        MAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY AGRST+  STHRRHAAP  VV+ALV
Subjt:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2571.88Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV
        IL+LLQL PN AGRTL EKP MVR  E      LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHYA   S Q  ST RR+A PV VVEAL+
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2174.32Show/hide
Query:  LQPNLAGRTLHEKPLMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTH
        L PN+AGRTLHE P MVR TE    LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    ST+  S H
Subjt:  LQPNLAGRTLHEKPLMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]1.8e-3182.61Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV
        +LLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  STQ  STHRR+AAP  VV+ LV
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]9.8e-3885.44Show/hide
Query:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVE
        MKFL+  LAMAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY AGRST+  STHRRHAAP  VV+
Subjt:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVE

Query:  ALV
        ALV
Subjt:  ALV

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein8.7e-3282.61Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV
        +LLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A  STQ  STHRR+AAP  VV+ LV
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV

A0A1R3G9P6 Uncharacterized protein2.5e-1051.14Show/hide
Query:  MKFLYITLAMAILL-LLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTH
        M+ L I LA  +LL LLQ+Q   A R LHE+  +V+  +L LQSLQ+  VPPS  S CT IPG+ GPGCPL E HYA G +     T+
Subjt:  MKFLYITLAMAILL-LLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTH

A0A2P6QQE6 Uncharacterized protein1.9e-1044.79Show/hide
Query:  ITLAMAILLL---LQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAA--GRSTQHLSTHRRHAAPVPV
        +  A+A+LLL   L +QPN A R L+   ++++   + LQSL R   PP+G S CT+IPGT G GCPLK ++YA   GR   H S + R  AP  V
Subjt:  ITLAMAILLL---LQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAA--GRSTQHLSTHRRHAAPVPV

A0A5A7U6N3 Putative transmembrane protein2.9e-3587.23Show/hide
Query:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV
        MAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY AGRST+  STHRRHAAP  VV+ALV
Subjt:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV

A0A5D3CZY7 Putative transmembrane protein4.7e-3885.44Show/hide
Query:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVE
        MKFL+  LAMAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY AGRST+  STHRRHAAP  VV+
Subjt:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVE

Query:  ALV
        ALV
Subjt:  ALV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTCTCTACATAACTCTAGCAATGGCAATCCTTCTCCTGTTGCAACTTCAGCCAAACTTGGCTGGCAGGACTTTGCATGAGAAACCACTTATGGTGAGAGGAAC
GGAGCTGAAGCTGCAATCTCTTCAGAGAGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCTGGCACCAATGGCCCCGGCTGTCCCCTAAAAGAGAGAC
ACTATGCTGCCGGCCGTTCCACGCAACATCTGAGCACTCACCGACGCCATGCTGCCCCTGTTCCTGTCGTCGAGGCTCTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTCTCTACATAACTCTAGCAATGGCAATCCTTCTCCTGTTGCAACTTCAGCCAAACTTGGCTGGCAGGACTTTGCATGAGAAACCACTTATGGTGAGAGGAAC
GGAGCTGAAGCTGCAATCTCTTCAGAGAGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCTGGCACCAATGGCCCCGGCTGTCCCCTAAAAGAGAGAC
ACTATGCTGCCGGCCGTTCCACGCAACATCTGAGCACTCACCGACGCCATGCTGCCCCTGTTCCTGTCGTCGAGGCTCTTGTCTGA
Protein sequenceShow/hide protein sequence
MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAGRSTQHLSTHRRHAAPVPVVEALV