CuGenDBv2

Gene ID	CcUC05G086380
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	rRNA-processing protein EFG1
Genome location	CicolChr05:4356491..4359597
RNA-Seq Expression	CcUC05G086380
Synteny	CcUC05G086380
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134104.1 rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]

7.7e-159

96.71

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA +KAGSS+RKSST+HRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_011650949.1 rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]

3.6e-156

96.11

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQA +KAGSS+RKSST+HRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_016899108.1 PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]

2.1e-156

96.41

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA +KAGSSLRKSST+HRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]

2.4e-160

97.01

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQLQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NHQRQISAR LMPPPRPTKSFSSSAQARSKAGSSLRKSST+HRAEFSTSSNTSGSRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]

1.1e-157

96.41

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQLQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NH  QISAR LMPPPRPTKSFSSSAQARSKAGSSLRKSST+HRAEFSTSSNTSGSRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7B4 rRNA-processing protein EFG1

3.7e-159

96.71

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA +KAGSS+RKSST+HRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A1S4DT25 rRNA-processing protein EFG1

1.0e-156

96.41

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA +KAGSSLRKSST+HRAEFSTSSNTSG RSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGS

Query:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SN-SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A6J1G412 rRNA-processing protein EFG1

7.8e-149

92.79

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQ QISARALMPPPRPTKSF SSAQARSK GSSLRK ST+ RAE S+SSNTS SRSG SFKARG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G415 rRNA-processing protein EFG1

2.7e-149

92.81

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKAR
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQARSK GSSLRK ST+ RAE S+SSNTS SRSG SFKAR
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKAR

Query:  GSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        GSSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  GSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G428 rRNA-processing protein EFG1

3.9e-148

92.49

Show/hide

Query:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRE QE+KLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NH  QISARALMPPPRPTKSF SSAQARSK GSSLRK ST+ RAE S+SSNTS SRSG SFKARG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG-SFKARG

Query:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hits

e value

%identity

Alignment

A3LNR4 rRNA-processing protein EFG1

7.0e-06

31.13

Show/hide

Query:  GKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
        GKRR N A+    G+      +   LK +IR  ER+L+K+ LPA+VR   ER ++ L+ + +        +++  +   ++FFE++K  R++++  K   
Subjt:  GKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR

Query:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD
          S      DI     ++K    DL YV  FPK+EKY++L+    ++D VD
Subjt:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD

A8N5J5 rRNA-processing protein EFG1

6.4e-07

31.36

Show/hide

Query:  PKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKLKE
        P    +K+ +R   R+L K NL A+ R   ER+L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G  +   +  QL + + 
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKLKE

Query:  DLEYVRFFPKTEKYVALF
        +L Y+  +PKT+KY++LF
Subjt:  DLEYVRFFPKTEKYVALF

P0CN34 rRNA-processing protein EFG1

4.1e-06

32.26

Show/hide

Query:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ
        PA     G  +   P    LK+ IR  +R+L K NL   +R + +R+L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +  
Subjt:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ

Query:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
         + S   ++L   +  L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

P0CN35 rRNA-processing protein EFG1

4.1e-06

32.26

Show/hide

Query:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ
        PA     G  +   P    LK+ IR  +R+L K NL   +R + +R+L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +  
Subjt:  PAARRSKGLAVEKKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQ

Query:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
         + S   ++L   +  L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

Q09867 rRNA-processing protein efg1

4.7e-10

36.03

Show/hide

Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK
        K P    LK +IR  ER+L+K NLPA +R   ER L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL
         + DL Y++ +P   KYV+L+         + R ++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

2.5e-99

65.49

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Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVREA E+KL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD
        R IRRLEKL R+ S G +QD++I  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASGK+LEETGSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD

Query:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG
        FF+ GSSSDEADADDEWTDKST+E  SS SG+A S MSSDE+N Q+  S R LMPPP            RS+  S+ R+ S+  R E  +SSNTS  RS 
Subjt:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSG

Query:  SFKARGSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        S  +  +++SHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SFKARGSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)

8.6e-100

66.96

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Query:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVRE+   KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF
        R IRRLEKLQR  S  + D DIA+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF

Query:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSS--NTSGSRS
        F  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDE+N Q+Q S RALMPPP          QAR ++ S  RK+    R E  +SS  NTS  RS
Subjt:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSS--NTSGSRS

Query:  -GSFKARGS-SNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
          S+ AR S +NS++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  -GSFKARGS-SNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

Sequences

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CDS sequence

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ATGGCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCAGCCCGCCGATCGAAGGGTTTGGCGGTTGAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAA
ATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGAGGCTCAAGAAAGGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCT
CGTTTGGCTGTTGAGCGGAAAATATTCTTGCGCGATAGGAAGATAAAATTTTTTGAGAGGAGGAAAATTGAAAGAAGAATTAGACGACTTGAAAAACTGCAACGT
GCTCCATCTGGCCAGTTGCAAGATTCAGATATCGCAGATCAATTGTCCAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTA
GCTTTATTTACTGGAAGTGATGATTCAGACATGGTTGATAGGAGGAAAAAGTTGCGCGAGCAGATTAAAGCCAATCTGATTGCTGCGGCAGCCAGTGGAAAGGAT
TTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGTGAGGACGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGG
ACAGATAAAAGTACAAGGGAACAGGCTTCCAGTACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATCTCTGCCAGAGCC
TTGATGCCACCTCCTCGTCCAACCAAATCATTTTCAAGTTCAGCTCAAGCTCGGTCAAAAGCTGGATCTTCGTTGAGAAAATCTTCTACAGATCACAGGGCTGAG
TTTTCTACATCCAGCAATACATCAGGTAGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCACATACAGGTCAGAGCAGTAATATAAGTTCCAATTCT
GATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAGCAGGTATGCCACTTGTACGAAAGCTTCACTCCTTCACACTAG

mRNA sequence

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TCAGAAAAAGGGGATAAATAGGGATTTGCATAAATTAAGAAGATCGTCTGGAAAATCCAAAAAGTTACAAAGGAAAGAAAGTAAAATGTTGGGACGTTGAAAGAA
AGAAAGAAACATATCCCCTCTCCGCCTCCGGTGTTCTGAGTCCACCGGTGTGGTGCTGAGAGCTTCTTCACTAAACCCTTCCTGCAAACCCACCTTCCTTCCTCT
TCCTCTTCCTCTTCCTCTTCTCTCTCATCTGCGTCCATGGCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCAGCCCGCCGATCGAAGGGTTTGGCGGTT
GAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGAGGCTCAAGAAAGGAAG
TTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGTTTGGCTGTTGAGCGGAAAATATTCTTGCGCGATAGGAAGATAAAATTTTTTGAGAGGAGGAAAATT
GAAAGAAGAATTAGACGACTTGAAAAACTGCAACGTGCTCCATCTGGCCAGTTGCAAGATTCAGATATCGCAGATCAATTGTCCAAGTTGAAAGAGGATCTTGAA
TATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACTGGAAGTGATGATTCAGACATGGTTGATAGGAGGAAAAAGTTGCGCGAGCAGATTAAA
GCCAATCTGATTGCTGCGGCAGCCAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGTGAGGACGATTTCTTCTTATGTGGC
AGCTCAAGTGATGAAGCAGATGCAGATGATGAATGGACAGATAAAAGTACAAGGGAACAGGCTTCCAGTACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGAT
GAAAAAAATCATCAGAGGCAGATCTCTGCCAGAGCCTTGATGCCACCTCCTCGTCCAACCAAATCATTTTCAAGTTCAGCTCAAGCTCGGTCAAAAGCTGGATCT
TCGTTGAGAAAATCTTCTACAGATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCAGGTAGTAGAAGTGGATCTTTTAAAGCTAGGGGATCCTCAAACTCA
CATACAGGTCAGAGCAGTAATATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAGCAGGTATGCCACTTGTACGAA
AGCTTCACTCCTTCACACTAG

Protein sequence

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MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVREAQERKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
APSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEW
TDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARSKAGSSLRKSSTDHRAEFSTSSNTSGSRSGSFKARGSSNSHTGQSSNISSNS
DAHKPRRKRRPKKKKQQVCHLYESFTPSH

CcUC05G086380 (gene) of Watermelon (PI 537277) v1 genome