; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G088070 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G088070
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionnucleolar protein 58
Genome locationCicolChr05:5799258..5800627
RNA-Seq ExpressionCcUC05G088070
SyntenyCcUC05G088070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]9.6e-6187.9Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALR SKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQKIV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKKLRL
XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]2.0e-5886.36Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALR SKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKLHQDPNA SSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQKIV+DSECGVGK P  K
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKK
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]1.5e-5882.61Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALR SKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNK       KK KKNKRQKIV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQKIVDDSECGVGKKPKKKLRL
XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]9.0e-5983.65Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALR SKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNK-----KKNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNK     KK KKNKRQKIV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNK-----KKNKKNKRQKIVDDSECGVGKKPKKKLRL
XP_038890855.1 uncharacterized protein LOC120080295 [Benincasa hispida]1.4e-6490.97Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALR SKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFL+RKLHQDPNALSSI+PQILDLAVRNAKASVLS G+SGSGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE S D+GEAMNSEPR+Q KKK KKKNKKNKRQKIV+DS CGVGKKPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein4.7e-6187.9Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALR SKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQKIV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKKLRL
A0A1S3AY37 uncharacterized protein LOC1034838329.7e-5986.36Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALR SKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKLHQDPNA SSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQKIV+DSECGVGK P  K
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKIVDDSECGVGKKPKKK
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X11.8e-5782.1Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALR SKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQ-KIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNK       KK KKNKRQ KIV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQ-KIVDDSECGVGKKPKKKLRL
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X27.4e-5982.61Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALR SKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNK       KK KKNKRQKIV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNK-------KKNKKNKRQKIVDDSECGVGKKPKKKLRL
A0A6J1IUT6 uncharacterized protein LOC1114794944.4e-5983.65Show/hide
Query:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALR SKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNK-----KKNKKNKRQKIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNK     KK KKNKRQKIV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNK-----KKNKKNKRQKIVDDSECGVGKKPKKKLRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein1.3e-3659.76Show/hide
Query:  EDLTEEERRALRRSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALR SKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRRSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKK----------KNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL
        +D EVS D+ +  N++  K+KK          K KKKNKK+K+Q  VD  E    K+P KKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKK----------KNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL
AT5G18540.2 unknown protein3.5e-3759.63Show/hide
Query:  EDLTEEERRALRRSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALR SKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRRSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRK-------QKKKNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL
        +D EVS D+ +  N++  K       +KKK +KK KKNK+ KI  D +  + K+P KKL+L
Subjt:  DDPEVSFDEGEAMNSEPRK-------QKKKNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGAGAAGCAAATTTGCGCCTCTCCCATCCCAATCCACTTCCTCTCGATCTCAACCAAGGTTGGCTCATCCAGG
TGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCGAAAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCG
CTGTTCGGAATGCCAAAGCCTCTGTTCTATCCAGTGGCACGTCAGGTTCTGGCACAACTATTCGCCACGTGGATACATTCGATGATCCTGAGGTCTCTTTTGACGAAGGG
GAAGCCATGAATTCTGAGCCTAGAAAGCAAAAGAAGAAGAACAAGAAGAAAAATAAGAAGAATAAAAGGCAAAAGATTGTTGATGACTCGGAGTGTGGCGTTGGGAAGAA
ACCTAAAAAGAAGTTGAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ACGATGTCGTAAAAGCTGCAGAAGGAAACTGTATTCAGTATACAGATTTTAGAAGGAAAAAAAAAATAAGTAAAAGAAGAAGAAATAGAGAAAATCCATAGCCATGGAGG
ATCTTACCGAAGAAGAAAGACGTGCTTTACGGAGAAGCAAATTTGCGCCTCTCCCATCCCAATCCACTTCCTCTCGATCTCAACCAAGGTTGGCTCATCCAGGTGGACCA
TTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCGAAAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCGCTGTTCG
GAATGCCAAAGCCTCTGTTCTATCCAGTGGCACGTCAGGTTCTGGCACAACTATTCGCCACGTGGATACATTCGATGATCCTGAGGTCTCTTTTGACGAAGGGGAAGCCA
TGAATTCTGAGCCTAGAAAGCAAAAGAAGAAGAACAAGAAGAAAAATAAGAAGAATAAAAGGCAAAAGATTGTTGATGACTCGGAGTGTGGCGTTGGGAAGAAACCTAAA
AAGAAGTTGAGATTGTGAGCTGAAAGGAAACACAACTGGAGATATGATATTCAGTCTTCAGAAGATTGGGGAATTAACTTGAAAGGAGTTGGATGAAACCATTTTGGAAG
CAAGGCAGTTATTAAGCCCTACAGGGTTGTTGCTGTTCCTGATATTTTTTGAACAAGGAGAACTATTAAATCTCATATTCACGAGTCTAAAACACTTGATTGACTTGATT
TCTCTAGTAAAAGAATGCTGTTTAGCTTCTCCTACTCATGTTGCAACATTTTATTTTTTGTTGGCAA
Protein sequenceShow/hide protein sequence
MEDLTEEERRALRRSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTFDDPEVSFDEG
EAMNSEPRKQKKKNKKKNKKNKRQKIVDDSECGVGKKPKKKLRL