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CcUC05G088460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G088460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:6089297..6089545
RNA-Seq ExpressionCcUC05G088460
SyntenyCcUC05G088460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049516.1 hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa]6.3e-2773.75Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        AR DL RIG+E FA+IEEHYDRPRRRP+   P  PQPV  +QPP+RMV  SPPIRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0644.16Show/hide
Query:  MAARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQ-PVAVVQPPQRMVGPSP-PIRCDQLAKAHGGMIIKDW
        MA R DL +IG EGF +I+E++ R    RRP    P  PQ P    QPP++M    P P+ C+Q+A+A GG++I  W
Subjt:  MAARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQ-PVAVVQPPQRMVGPSP-PIRCDQLAKAHGGMIIKDW

KGN57134.1 hypothetical protein Csa_010351 [Cucumis sativus]2.4e-1056.72Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGG
        +R DL +IGLEGFA+IEE Y +  P+RRP+  A   PQ +  + PPQRM   SPPIRC+QLAK H G
Subjt:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGG

KGN57135.1 hypothetical protein Csa_010300 [Cucumis sativus]8.5e-2471.08Show/hide
Query:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        MAAR  DL RIGLEGF  IEE YDRPRR+P+  AP  PQPV  + PPQR V  SP IRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A8 Uncharacterized protein4.1e-2471.08Show/hide
Query:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        MAAR  DL RIGLEGF  IEE YDRPRR+P+  AP  PQPV  + PPQR V  SP IRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  MAAR-KDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL

A0A0A0L7Z0 Uncharacterized protein1.2e-1056.72Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGG
        +R DL +IGLEGFA+IEE Y +  P+RRP+  A   PQ +  + PPQRM   SPPIRC+QLAK H G
Subjt:  ARKDLTRIGLEGFAIIEEHYDR--PRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGG

A0A5A7U5Q5 Uncharacterized protein3.1e-2773.75Show/hide
Query:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL
        AR DL RIG+E FA+IEEHYDRPRRRP+   P  PQPV  +QPP+RMV  SPPIRCDQLAKAHGG+IIK+WGGKRVNK +
Subjt:  ARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGTAAGGATCTCACTAGGATTGGATTGGAAGGCTTTGCCATTATAGAAGAACACTACGACCGACCGAGGAGGAGGCCGAAGCCAGGTGCTCCAGGTCAGCC
GCAACCAGTGGCAGTAGTTCAACCTCCACAAAGAATGGTTGGGCCATCGCCGCCTATTCGTTGTGATCAGTTGGCCAAAGCTCACGGAGGTATGATCATTAAAGACTGGG
GTGGAAAGCGGGTCAACAAAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTCGTAAGGATCTCACTAGGATTGGATTGGAAGGCTTTGCCATTATAGAAGAACACTACGACCGACCGAGGAGGAGGCCGAAGCCAGGTGCTCCAGGTCAGCC
GCAACCAGTGGCAGTAGTTCAACCTCCACAAAGAATGGTTGGGCCATCGCCGCCTATTCGTTGTGATCAGTTGGCCAAAGCTCACGGAGGTATGATCATTAAAGACTGGG
GTGGAAAGCGGGTCAACAAAGCTCTTTGA
Protein sequenceShow/hide protein sequence
MAARKDLTRIGLEGFAIIEEHYDRPRRRPKPGAPGQPQPVAVVQPPQRMVGPSPPIRCDQLAKAHGGMIIKDWGGKRVNKAL