; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G088690 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G088690
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat
Genome locationCicolChr05:6250149..6259111
RNA-Seq ExpressionCcUC05G088690
SyntenyCcUC05G088690
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049533.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.5e-7142.92Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------
        M GF S AFR TPVLRNRPLQAYTP NN+RRQ P DSIQRTSKQ  FNN          SPL                                      
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------

Query:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--
                     R+ + L +  ++ +     L  +RF++ +   D                                                C +   
Subjt:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--

Query:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT
                                                                                 LGVVDEALRL+KQMEG GYFPNVFTYT
Subjt:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT

Query:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD
        ILIDGF NAKRADEAF VLQTMKE+NVVPNAATMRSLVHGVF C+ PDKAFELLLEFV++KQ VSQLVCDNILY LSNNSMAS+AVMFLSK GK+GYVP 
Subjt:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD

Query:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        SS F VTLAC+LKKLDLKETC +FDNCVQ G
Subjt:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG

XP_008438927.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis melo]8.6e-7243.16Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------
        M GF S AFR TPVLRNRPLQAYTP NN+RRQ P DSIQRTSKQ  FNN          SPL                                      
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------

Query:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--
                     R+ + L +  ++ +     L  +RF++ +   D                                                C +   
Subjt:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--

Query:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT
                                                                                 LGVVDEALRLMKQMEG GYFPNVFTYT
Subjt:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT

Query:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD
        ILIDGF NAKRADEAF VLQTMKE+NVVPNAATMRSLVHGVF C+ PDKAFELLLEFV++KQ VSQLVCDNILY LSNNSMAS+AVMFLSK GK+GYVP 
Subjt:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD

Query:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        SS F VTLAC+LKKLDLKETC +FDNCVQ G
Subjt:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG

XP_011651073.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucumis sativus]2.3e-7242.4Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR------------------------------VGVDLVWQSTVCKY-
        M GFPSSAFRATPVLRNRPLQAYTP N +RRQ+P +SIQRTSKQ PFNN E+P R                              + +  + +S + K  
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR------------------------------VGVDLVWQSTVCKY-

Query:  -----------------------------------LGKLRFWVLIPPPD------------------------------------------------CTM
                                           L  +RF++ +   D                                                C +
Subjt:  -----------------------------------LGKLRFWVLIPPPD------------------------------------------------CTM

Query:  L---------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVF
                                                                                    LGVVDEALRLMKQMEG GYFPNVF
Subjt:  L---------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVF

Query:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY
        TYTILIDGF NAKRA E F VLQTMKE+NVVPN ATMRSLVHGVF C+ PDKAFELLLEFVE+KQ ++QLVCDNILY LSNNSMASEAVMFL K GK+GY
Subjt:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY

Query:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        VP SS F +TLACVLKKLDLK TC VFDNCVQ G
Subjt:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

XP_023539285.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita pepo subsp. pepo]4.7e-7086.08Show/hide
Query:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL
        LGVVDEALRLMKQMEG GYFPNVFTYTILIDGF NA RADEAF VLQTMKE+NVVPNAATMRSLVHGVF C  PDKAFE LLEFVEKK  VSQLVCDNIL
Subjt:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL

Query:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        Y LSNNSMASEAVMFLSK+GKKGYVPD+S F VT+ACVL KLDLKE C++FDNC QRG
Subjt:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

XP_023539285.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita pepo subsp. pepo]1.4e-0861.82Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR
        M G  SS  RATPVLRNRP QAY+  N YRRQ P +++ RTSK  P NNTE+P R
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR

XP_038897886.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Benincasa hispida]2.5e-7946.54Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLRVG-------------VDLVWQSTVC-------------KYLGKL-
        M G P SAFRATPVLRNRPLQAYTPTN YRRQIP D+IQRTSKQRPFNNTE+P R               ++L  +S++               YL ++ 
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLRVG-------------VDLVWQSTVC-------------KYLGKL-

Query:  --RFW-------------VLIPP-----------------------------------------------PDCTMLL-----------------------
          + W             VL+P                                                PD  +LL                       
Subjt:  --RFW-------------VLIPP-----------------------------------------------PDCTMLL-----------------------

Query:  -----------------------------------------------------------------------------GVVDEALRLMKQMEGSGYFPNVF
                                                                                     GVVDEALRL+KQMEG GYFPNVF
Subjt:  -----------------------------------------------------------------------------GVVDEALRLMKQMEGSGYFPNVF

Query:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY
        TYTILIDGF NAKRADEAF VLQTMKEKNVVPNAA+MRSLVHGVF C+ PDKAFELLLEFVEKKQ VSQLVCDNILY LSNNSMASEAVMFLSK GKKGY
Subjt:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY

Query:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        VPDSS F VTLACVLKKLDLKETCN+FDNCVQRG
Subjt:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

TrEMBL top hitse value%identityAlignment
A0A0A0L5W1 Uncharacterized protein1.1e-7242.4Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR------------------------------VGVDLVWQSTVCKY-
        M GFPSSAFRATPVLRNRPLQAYTP N +RRQ+P +SIQRTSKQ PFNN E+P R                              + +  + +S + K  
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR------------------------------VGVDLVWQSTVCKY-

Query:  -----------------------------------LGKLRFWVLIPPPD------------------------------------------------CTM
                                           L  +RF++ +   D                                                C +
Subjt:  -----------------------------------LGKLRFWVLIPPPD------------------------------------------------CTM

Query:  L---------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVF
                                                                                    LGVVDEALRLMKQMEG GYFPNVF
Subjt:  L---------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVF

Query:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY
        TYTILIDGF NAKRA E F VLQTMKE+NVVPN ATMRSLVHGVF C+ PDKAFELLLEFVE+KQ ++QLVCDNILY LSNNSMASEAVMFL K GK+GY
Subjt:  TYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGY

Query:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        VP SS F +TLACVLKKLDLK TC VFDNCVQ G
Subjt:  VPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

A0A1S3AXI6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial4.2e-7243.16Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------
        M GF S AFR TPVLRNRPLQAYTP NN+RRQ P DSIQRTSKQ  FNN          SPL                                      
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------

Query:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--
                     R+ + L +  ++ +     L  +RF++ +   D                                                C +   
Subjt:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--

Query:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT
                                                                                 LGVVDEALRLMKQMEG GYFPNVFTYT
Subjt:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT

Query:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD
        ILIDGF NAKRADEAF VLQTMKE+NVVPNAATMRSLVHGVF C+ PDKAFELLLEFV++KQ VSQLVCDNILY LSNNSMAS+AVMFLSK GK+GYVP 
Subjt:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD

Query:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        SS F VTLAC+LKKLDLKETC +FDNCVQ G
Subjt:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG

A0A5A7U127 Putative pentatricopeptide repeat-containing protein1.2e-7142.92Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------
        M GF S AFR TPVLRNRPLQAYTP NN+RRQ P DSIQRTSKQ  FNN          SPL                                      
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNN--------TESPL--------------------------------------

Query:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--
                     R+ + L +  ++ +     L  +RF++ +   D                                                C +   
Subjt:  -------------RVGVDLVWQSTVCKY----LGKLRFWVLIPPPD------------------------------------------------CTML--

Query:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT
                                                                                 LGVVDEALRL+KQMEG GYFPNVFTYT
Subjt:  -------------------------------------------------------------------------LGVVDEALRLMKQMEGSGYFPNVFTYT

Query:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD
        ILIDGF NAKRADEAF VLQTMKE+NVVPNAATMRSLVHGVF C+ PDKAFELLLEFV++KQ VSQLVCDNILY LSNNSMAS+AVMFLSK GK+GYVP 
Subjt:  ILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPD

Query:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        SS F VTLAC+LKKLDLKETC +FDNCVQ G
Subjt:  SSIFKVTLACVLKKLDLKETCNVFDNCVQRG

A0A6J1F885 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial4.3e-0858.18Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR
        M G  SS  RATPVLRNRP +AY+  N YRR+ P +++ RTSK  P NNTE+P R
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR

A0A6J1IIL6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial3.3e-6984.81Show/hide
Query:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL
        LGVVDEALRLMKQMEG GYFPNVFTYTILIDGF NA RA+EAF VLQTMKE+NVVPNAATMRSLVHGVF C  PDKAFE LLEFV+KK  VSQLVCDNIL
Subjt:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL

Query:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        Y LSNNSMASEAVMFLSK+GKKGYVPDSS F VT+ACVL  LDLKE C++FDNC QRG
Subjt:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

A0A6J1IIL6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial2.5e-0860Show/hide
Query:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR
        M G  SS  RATPVLRNRP +AY+  N YRRQ P +++ RTSK  P NNTE P R
Subjt:  MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLR

A0A6J1IIL6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial4.3e-6984.81Show/hide
Query:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL
        LGVVDEALRLMKQMEG GYFPNVFTYTILIDGF NA RA+EAF VLQTMKE+NVVPNAATMRSLVHGVF C  PDKAFE LL+FVEKK  VSQLVCDNIL
Subjt:  LGVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNIL

Query:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        Y LSNNSMASEAVMFLSK+GKKGYVPDSS F VT+ACVL KLD KE C++FDNC QRG
Subjt:  YHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

SwissProt top hitse value%identityAlignment
Q76C99 Protein Rf1, mitochondrial2.1e-1226.14Show/hide
Query:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN
        E L +M    G G  P+V +YT +I+GF     +D+A++    M ++ ++P+  T  S++  +      DKA E+L   V+       +  ++IL+   +
Subjt:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN

Query:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
        +    EA+ FL K+   G  PD   + + +  + K     E   +FD+  +RG
Subjt:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397103.0e-1123.57Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        G ++EA R++++M  +G+ P+V TY  LI+G     + ++A  VL+ MKEK + P+  +  +++ G       D+A  +  E VEK  +   +   +++ 
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
                 EA     ++ + G  PD   +   +     + DL++   + +  V++G
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

Q9FLJ4 Pentatricopeptide repeat-containing protein At5g614004.0e-1126.8Show/hide
Query:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN
        EA+ L+ +ME     P+VFTYTILI+G     +  EA  + Q MK + + P++AT  SL+HG       ++A +L  E        + +    ++    N
Subjt:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN

Query:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
              A+    ++  KG VPD   +   +    K+ ++KE   ++ + ++ G
Subjt:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461004.7e-1228.93Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        G +DEA +L  +M      P V TYT LI+G   +K  DEA   L+ MK K + PN  T  SL+ G+       +A EL    + +  R + +    ++ 
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLA--CVLKKLDLKETCNVFDNCVQRG
         L       EAV  L ++  +G  PD+ ++   ++  C + K   +E  N  D  +  G
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLA--CVLKKLDLKETCNVFDNCVQRG

Q9LSQ2 Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial7.2e-4556.69Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        GVVDEA+RL+KQME  G  PNVFTYTILIDGFL A R DEA   L+ M+ + + PN AT+R+ VHG+F C+ P KAFE+L+ F+EK   + ++  D +LY
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
         LSNNSMA E   FL KIG++GY+PDSS F   ++C+LK  DL ETC +FD  V RG
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

Arabidopsis top hitse value%identityAlignment
AT2G17140.1 Pentatricopeptide repeat (PPR) superfamily protein6.3e-1232.52Show/hide
Query:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN
        EA  ++KQM   G  P++++Y IL+DG        +A T++  MK   V P+A T   L+HG       D A  LL E +      +   C+ +L+ L  
Subjt:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN

Query:  NSMASEAVMFLSKIGKKGYVPDS
            SEA   L K+ +KGY  D+
Subjt:  NSMASEAVMFLSKIGKKGYVPDS

AT3G16890.1 pentatricopeptide (PPR) domain protein 405.1e-4656.69Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        GVVDEA+RL+KQME  G  PNVFTYTILIDGFL A R DEA   L+ M+ + + PN AT+R+ VHG+F C+ P KAFE+L+ F+EK   + ++  D +LY
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
         LSNNSMA E   FL KIG++GY+PDSS F   ++C+LK  DL ETC +FD  V RG
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-1223.57Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        G ++EA R++++M  +G+ P+V TY  LI+G     + ++A  VL+ MKEK + P+  +  +++ G       D+A  +  E VEK  +   +   +++ 
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
                 EA     ++ + G  PD   +   +     + DL++   + +  V++G
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG

AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-1328.93Show/hide
Query:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY
        G +DEA +L  +M      P V TYT LI+G   +K  DEA   L+ MK K + PN  T  SL+ G+       +A EL    + +  R + +    ++ 
Subjt:  GVVDEALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILY

Query:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLA--CVLKKLDLKETCNVFDNCVQRG
         L       EAV  L ++  +G  PD+ ++   ++  C + K   +E  N  D  +  G
Subjt:  HLSNNSMASEAVMFLSKIGKKGYVPDSSIFKVTLA--CVLKKLDLKETCNVFDNCVQRG

AT5G61400.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-1226.8Show/hide
Query:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN
        EA+ L+ +ME     P+VFTYTILI+G     +  EA  + Q MK + + P++AT  SL+HG       ++A +L  E        + +    ++    N
Subjt:  EALRLMKQMEGSGYFPNVFTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSN

Query:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG
              A+    ++  KG VPD   +   +    K+ ++KE   ++ + ++ G
Subjt:  NSMASEAVMFLSKIGKKGYVPDSSIFKVTLACVLKKLDLKETCNVFDNCVQRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGTTTCCTTCTTCGGCTTTCAGGGCAACGCCTGTTCTAAGAAATCGACCTCTACAAGCTTACACTCCCACCAACAATTATCGGAGACAAATCCCTTTCGATTC
AATCCAACGAACTTCAAAACAACGTCCCTTCAACAACACTGAATCGCCTTTAAGAGTTGGGGTAGATTTGGTTTGGCAAAGTACTGTGTGTAAGTATTTGGGCAAATTGC
GTTTTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGGAGGGCTCGGGATATTTTCCTAATGTT
TTCACATATACAATCTTGATTGATGGATTTCTCAATGCCAAAAGGGCTGATGAAGCCTTCACAGTTTTACAGACAATGAAGGAGAAGAATGTGGTTCCAAATGCAGCTAC
TATGAGATCCTTGGTTCATGGAGTTTTTTGTTGTATGACCCCAGATAAGGCTTTTGAACTCTTGTTGGAATTTGTTGAGAAGAAGCAGCGTGTATCTCAATTGGTTTGTG
ACAATATTCTTTACCATCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAATTGGCAAGAAAGGTTATGTACCGGACAGTTCAATCTTCAAGGTC
ACCTTGGCATGTGTATTAAAGAAGCTAGACCTGAAGGAAACATGCAATGTATTTGATAATTGTGTGCAGAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTAGGCTCAGTCTCTTGAAAAGGCCATGGGAGGGTTTCCTTCTTCGGCTTTCAGGGCAACGCCTGTTCTAAGAAATCGACCTCTACAAGCTTACACTCCCACCAACAAT
TATCGGAGACAAATCCCTTTCGATTCAATCCAACGAACTTCAAAACAACGTCCCTTCAACAACACTGAATCGCCTTTAAGAGTTGGGGTAGATTTGGTTTGGCAAAGTAC
TGTGTGTAAGTATTTGGGCAAATTGCGTTTTTGGGTCTTAATCCCACCACCAGACTGTACAATGCTGCTTGGGGTGGTGGATGAGGCACTTCGTTTGATGAAACAAATGG
AGGGCTCGGGATATTTTCCTAATGTTTTCACATATACAATCTTGATTGATGGATTTCTCAATGCCAAAAGGGCTGATGAAGCCTTCACAGTTTTACAGACAATGAAGGAG
AAGAATGTGGTTCCAAATGCAGCTACTATGAGATCCTTGGTTCATGGAGTTTTTTGTTGTATGACCCCAGATAAGGCTTTTGAACTCTTGTTGGAATTTGTTGAGAAGAA
GCAGCGTGTATCTCAATTGGTTTGTGACAATATTCTTTACCATCTTTCAAATAATTCTATGGCCAGTGAGGCTGTCATGTTTTTGAGTAAAATTGGCAAGAAAGGTTATG
TACCGGACAGTTCAATCTTCAAGGTCACCTTGGCATGTGTATTAAAGAAGCTAGACCTGAAGGAAACATGCAATGTATTTGATAATTGTGTGCAGAGAGGTTGACAGCCA
GGGTTCAGTACATATCTTACACTTATTGAAGCTCTGTACAAGGCAGGGAAAATGGAGATTGGAAACCAATATATGGATAGGATAATAAATGACGGTCTTATTTCCAGCGT
ATATTCATATAACATGGTCATTGATTGCCTTTGCAAAGGCAAATTAATGGACAGAGCATCGGAAATCTTTAGGGATCTGCATTATAAAGATATCTTCACATTTAATTCAT
TAATTGATGGCCTCTGTCAAGCACATAAGCATGAGGATGCTTTTGGTTGTTTCACTGAAATGATTGAGTGGGATGTCACTCCGGATGCTACCACATATAATATATTGATA
CGTTCCTTCTGTGCCATTGGAGATGTTTCTAGATCTACTCATCTCTTGAGAGAAATGAAACTTCATGGTATACAACATGATACTTTCTCCTTCAATGCTCTTATCCAAAG
CTACTTTCGAGTGACAGGGTTCAGAAAGTTGAGAAGCTTTTTGATTCAATGTTAAGGTTGGGTATACAGCCTGACAACTATACATATGCTGCTCTTATTAAGTCACTGTG
CAAATTGGGCAGGCATGATGAAGCGAGGGAGATGTTTCTCTCAATGAAGGTGAATGGTTGTACTCCTGACTCTTGTACTTGCAGTCTTGTGAACGACTCTGTTGCCCATA
TTTAGATCTTTATGAGAATGCTAAGATATTGTGAAGATTGAAGAAAATATGAAGACAAGGACATTTTATAACGAACTTAGAAATTGGGATTGGCTGTTTATTGGTATCAT
TCTCATGACGTTTCCCATTTCTGAGTACTGTCAACATGAAAAGTGTTCCATGTTTCAGAGAGAGGAGGTCAAGTGATTCACATTTCATTTGATGTTTAGAAGCAGTTTGG
TGAGTTTTCAGACTCCAAATGTTATTTTGGTCAAATAGAAGTGTTGGTGAATTATTCAAGGTGCACGAGCAAGCTTGAATATCCACAGTTATTTAAAAAAACATTCTGGT
GTTCTAAATCTTGATGCTTAGCTGCTGGGACTGGGAGCACAAAACTTAAGCTGCTATCGTTATCTTCGTTTACAAGCATGCATAGATGTGTAATAAGGCATAATCACTTC
CAATTTGGCTCCTCTTATTCTCTAATAGTGTAGATGAAACTCCAAAGGTCATTACGTGGGGGGACGAAACTTACCATCTGCCCCCTGCATCATCCTGCTGGCATTGTATG
AGGCTTTAGAATTCGACAGCTTATTTCTGCTGTAGTCTTGGAGTTCCTTCTACAGTGGGAAAAACAGAAAGTTCCATATAATGGTACAACTGTCCTTCATGTGACCTTAA
TACAACTTATCAAATTTTCAATACTGGGAAAATACTTTATTGGTTGCCAATGGGAAAAGGGGATCATATGTTATCTTACTATGTATTTACTTTGCAAAGGAGTCCAAGTT
TGAAGAGCTTATACTCTGATTTCTCCGTAACTATTAGCCCAAGCTTGATTTGACAACTGGTATTTTAGATCACGAATCAGGTTTTTGAATTATTATGTGAGACATTGGGG
ACTTTCTTACCGCTTCTGTCACCAATAGAAAAAACAAAATTACAAGAAATCTTGATGGGCATTCGGACTGTTGGTTTCACATTTAGCATTTATGATGGAGATAGCATAGC
AGTGTTAAAGTTGGCTTGTATCTGCCTTTGCTTTTCTCTTTGCAGATAGGTTAGGTGGATAAAGTTGTATGTGCAATGGACGCCTCAGGTTCTGACCCTGCTGAAACATT
CTCCAGGAACTTGCTGTGTCTGGGTCTTGTGAAGATGCTGTCCTTGTGAATAGAGGGTATAGTTATTCGTCGAGATGAAAATGAATTAGTTGGGTCTCGAGCGAGCGGTT
GGTTTGTTTCACTCGAATCATAATGTCTCCCACAAGACAGCGAAAAGCCCTGAAAAATTGTGAGTCGATCTGCTTGTCAGCCAATCTTACTTCGATGTTGTGAGCTTTAC
TCAGGTCATTAAGAAACGAAAATAAGGCTGCAATCTGCAATATTATGTGGAATATTCTATCAACTACGAATCTTCTTATGGTCGAGAGATCTTAAAAGCTTATGACTTTA
GAAACTTTACAAGACCATAGATATGAGTCTAATCTAGTAAGAAGATTTGAACAAAAATTCAAACATTATTCGAATTCTGCTGCTTATATGAATGACTTATTTTGTATCTT
GTTTTACATATAAACATTGTTCCAATCTTTCCTTGGAGATTGATTTACTACTCAACCAGTGATTGAA
Protein sequenceShow/hide protein sequence
MGGFPSSAFRATPVLRNRPLQAYTPTNNYRRQIPFDSIQRTSKQRPFNNTESPLRVGVDLVWQSTVCKYLGKLRFWVLIPPPDCTMLLGVVDEALRLMKQMEGSGYFPNV
FTYTILIDGFLNAKRADEAFTVLQTMKEKNVVPNAATMRSLVHGVFCCMTPDKAFELLLEFVEKKQRVSQLVCDNILYHLSNNSMASEAVMFLSKIGKKGYVPDSSIFKV
TLACVLKKLDLKETCNVFDNCVQRG