CuGenDBv2

Gene ID	CcUC05G089140
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein Ycf2
Genome location	CicolChr05:6707367..6707720
RNA-Seq Expression	CcUC05G089140
Synteny	CcUC05G089140
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

3.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

YP_009751528.1 Ycf2 protein [Thladiantha dubia]

3.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

YP_009751696.1 Ycf2 protein [Hodgsonia heteroclita]

3.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

YP_009752033.1 Ycf2 protein [Cionosicys macranthus]

3.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

3.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

TrEMBL top hits

e value

%identity

Alignment

A0A343F2F1 Protein Ycf2

1.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

A0A6H0ESM3 Protein Ycf2

1.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

A0A6H0ET42 Protein Ycf2

1.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

A0A6H0EV63 Protein Ycf2

1.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

A0A6M3RUH1 Protein Ycf2

1.9e-46

87.27

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSVVQDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGALLGSSR EKDC+RFDND VTLLLRPEP+NPLD+IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

SwissProt top hits

e value

%identity

Alignment

A0A379 Protein Ycf2

1.4e-46

82.73

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGAL+GSSR EKDC++FDND VTLLLRPEP+NPLD++Q+GSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

Q09WV7 Protein Ycf2

1.1e-46

81.82

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLPE DEKNGITSYGLVE DSDLVHGL   EG L+GSSR EKDC++FDND  TLLLRPEP+NPLD++QNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +Y+SEFEEGE
Subjt:  EYESEFEEGE

Q0ZIV6 Protein Ycf2

6.2e-47

83.49

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGAL+GSSR EKDC++FDND VTLLLRPEP+NPLD++QNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEG
        +YESEFEEG
Subjt:  EYESEFEEG

Q68RU4 Protein Ycf2

2.4e-46

82.73

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGAL+GSSR EKDC++FDND VTLLLRPEP+NPLD++QNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        + ESEFEEGE
Subjt:  EYESEFEEGE

Q9B1K6 Protein Ycf2

1.8e-46

82.73

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAG+V QDLWSLP  DEKNGITSYGLVE DSDLVHGL   EGAL+GSSR EKDC++FDND VTLLLRPEP NPL++IQNGSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

4.3e-43

76.36

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLP  DEKN ITSYG VE DSDLVHGL   +GAL+GSSR EKDC++FDND VTLL R EP++PL ++Q+GSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

4.3e-43

76.36

Show/hide

Query:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE
        ILLYLLSCSAGSV QDLWSLP  DEKN ITSYG VE DSDLVHGL   +GAL+GSSR EKDC++FDND VTLL R EP++PL ++Q+GSCS++DQRFLYE
Subjt:  ILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGL---EGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYE

Query:  EYESEFEEGE
        +YESEFEEGE
Subjt:  EYESEFEEGE

Sequences

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CDS sequence

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ATGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGAATCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGA
GAAAGATTCTGATCTAGTTCATGGCCTAGAAGGCGCTCTATTGGGATCCTCACGGGCAGAAAAAGATTGCAATCGATTTGATAATGATTCAGTGACATTGCTTCTTCGGC
CCGAACCCAAAAATCCCTTGGATATAATACAAAATGGATCTTGTTCTGTCATTGATCAGAGATTTCTCTATGAAGAATACGAATCGGAGTTTGAAGAAGGGGAGGAGAAG
GAGTCCTCGACCCGCAACAGATAG

mRNA sequence

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Protein sequence

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MILLYLLSCSAGSVVQDLWSLPESDEKNGITSYGLVEKDSDLVHGLEGALLGSSRAEKDCNRFDNDSVTLLLRPEPKNPLDIIQNGSCSVIDQRFLYEEYESEFEEGEEK
ESSTRNR

CcUC05G089140 (gene) of Watermelon (PI 537277) v1 genome