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CcUC05G089170 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G089170
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPhosphatidic acid phosphatase type 2 domain containing 2
Genome locationCicolChr05:6770225..6772311
RNA-Seq ExpressionCcUC05G089170
SyntenyCcUC05G089170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER51752.1 Na(+)/H(+) antiporter NhaA [Striga asiatica]2.9e-0569.57Show/hide
Query:  LASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLP
        LASSL TLG IT LSPGFQ  GVA LC  A C++S TLTTSSM  P
Subjt:  LASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLP

TrEMBL top hitse value%identityAlignment
A0A1A8ABD8 Phosphatidic acid phosphatase type 2 domain containing 2 (Fragment)9.1e-0543.96Show/hide
Query:  ASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSSGSTMFSSLMISR
        ASS   LG     +PGFQ  GVAT   A   ++S T  +SS   PV+AGY+  + +FLS P+M   R  T  P  SFSSGS+M   +  SR
Subjt:  ASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSSGSTMFSSLMISR

A0A293LNX8 Peroxiredoxin (Fragment)8.8e-0844.55Show/hide
Query:  RYSFFDGSSTVSKPPGNICLASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSSG
        RY   DG+     P GN    SS +TLG+  H  P FQ  GVAT   +    +S    TSS F PV+AGY   SF FLS PMM  AR     P  SFS+G
Subjt:  RYSFFDGSSTVSKPPGNICLASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSSG

Query:  S
        +
Subjt:  S

A0A293MAW4 Glutathione peroxidase (Fragment)4.3e-0744.44Show/hide
Query:  RYSFFDGSSTVSKPPGNICLASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSS
        RY   DG+     P GN    SS +TLG+  H  P FQ  GVAT   +    +S    TSS F PV+AGY   SF FLS PMM  AR     P  SFS+
Subjt:  RYSFFDGSSTVSKPPGNICLASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSFSS

A0A5A7R353 Na(+)/H(+) antiporter NhaA1.4e-0569.57Show/hide
Query:  LASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLP
        LASSL TLG IT LSPGFQ  GVA LC  A C++S TLTTSSM  P
Subjt:  LASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGGCCAGAGGCCTTCACACAGCAGTGAAGCGCAGGTATTCCTTCTTTGATGGAAGCTCCACAGTTTCAAAGCCTCCAGGGAACATTTGCTTGGCTTCCTCATT
ACTCACACTCGGCGCAATCACGCACTTGTCACCCGGCTTCCAGTTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTCTGCAAAGACTCCAAAACCCTCACCACTTCCT
CCATGTTCCTACCAGTACTTGCTGGGTATAAGAAGCTCAGCTTCACCTTCTTGTCCAGACCGATGATGTGCAATGCTCGCGATGGCACTGCGCCACCCGACGGGTCTTTC
TCGTCGGGGTCAACCATGTTCAGTTCCTTAATGATCTCCCGCTTTGGATCCGCCAGTATTGGATATGTGACTTTTTTTCCTTTCTGTAACCCCATCATTCCTAGCTCTGT
GGTACAAACTGGAGTGAAATCACCTGCATGCAAATGCAAACGCCAAAGCAACAAGCAATACTGCTGCATCAATGTATCGCCGATTGTAAGTCCTGGCATCTTTGACCTAC
AGGAAGGGAGTTGTAGAATGATACAAATTCGAACACTGTGGGCCCTTTCACCTACTCAGAAGTATGGTAACATTAGAACAGTTTACAGTGAGATAAGAGGTAACATTTTG
CCGTTCGAAATAAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGGCCAGAGGCCTTCACACAGCAGTGAAGCGCAGGTATTCCTTCTTTGATGGAAGCTCCACAGTTTCAAAGCCTCCAGGGAACATTTGCTTGGCTTCCTCATT
ACTCACACTCGGCGCAATCACGCACTTGTCACCCGGCTTCCAGTTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTCTGCAAAGACTCCAAAACCCTCACCACTTCCT
CCATGTTCCTACCAGTACTTGCTGGGTATAAGAAGCTCAGCTTCACCTTCTTGTCCAGACCGATGATGTGCAATGCTCGCGATGGCACTGCGCCACCCGACGGGTCTTTC
TCGTCGGGGTCAACCATGTTCAGTTCCTTAATGATCTCCCGCTTTGGATCCGCCAGTATTGGATATGTGACTTTTTTTCCTTTCTGTAACCCCATCATTCCTAGCTCTGT
GGTACAAACTGGAGTGAAATCACCTGCATGCAAATGCAAACGCCAAAGCAACAAGCAATACTGCTGCATCAATGTATCGCCGATTGTAAGTCCTGGCATCTTTGACCTAC
AGGAAGGGAGTTGTAGAATGATACAAATTCGAACACTGTGGGCCCTTTCACCTACTCAGAAGTATGGTAACATTAGAACAGTTTACAGTGAGATAAGAGGTAACATTTTG
CCGTTCGAAATAAAGATATAG
Protein sequenceShow/hide protein sequence
MVEARGLHTAVKRRYSFFDGSSTVSKPPGNICLASSLLTLGAITHLSPGFQFTGVATLCFAAFCKDSKTLTTSSMFLPVLAGYKKLSFTFLSRPMMCNARDGTAPPDGSF
SSGSTMFSSLMISRFGSASIGYVTFFPFCNPIIPSSVVQTGVKSPACKCKRQSNKQYCCINVSPIVSPGIFDLQEGSCRMIQIRTLWALSPTQKYGNIRTVYSEIRGNIL
PFEIKI