CuGenDBv2

Gene ID	CcUC05G089690
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Photosystem II reaction center protein H
Genome location	CicolChr05:7210373..7210591
RNA-Seq Expression	CcUC05G089690
Synteny	CcUC05G089690
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0050821 - protein stabilization (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0042301 - phosphate ion binding (molecular function)
InterPro domains	IPR001056 - Photosystem II reaction centre protein H IPR036863 - Photosystem II reaction centre protein H superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM91195.1 photosystem II phosphoprotein [Lagenaria siceraria]

7.0e-30

97.22

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        M TQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

QHB75993.1 photosystem II protein H [Cucumis melo subsp. melo]

5.4e-30

95.83

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSS+SGPRRT+VG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]

2.4e-30

97.22

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRT+VG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

YP_009326018.1 photosystem II protein H [Citrullus lanatus]

1.8e-30

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]

7.0e-30

95.83

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRT+VG LLKPLNSEYGKVAPGWGTTPLMGVAMGLF IFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE91 Photosystem II reaction center protein H

8.9e-31

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

A0A1P8LEZ9 Photosystem II reaction center protein H

8.9e-31

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

A0A343A8D9 Photosystem II reaction center protein H

8.9e-31

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

A0A7T3USX9 Photosystem II phosphoprotein

8.9e-31

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

X2F4E0 Photosystem II reaction center protein H

8.9e-31

98.61

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

SwissProt top hits

e value

%identity

Alignment

A0A364 Photosystem II reaction center protein H

1.2e-29

90.14

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS
        MATQTVD+SSRSGPRRT VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS

Q2PMQ6 Photosystem II reaction center protein H

4.3e-30

91.55

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS
        MATQTV+D+SRSGPRRT+VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFL IILEIYNSSILLDGIS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS

Q49KW9 Photosystem II reaction center protein H

1.6e-29

90.14

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS
        MATQTV+ SSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS

Q4VZI9 Photosystem II reaction center protein H

3.5e-32

94.44

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS
        MATQTVDDSS+SGPRRT+VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFLCIILEIYNSSILLDGISS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

Q6EW23 Photosystem II reaction center protein H

2.1e-29

88.73

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS
        MATQT++ SSRSGPRRTIVG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00710.1 photosystem II reaction center protein H

3.3e-30

88.73

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Query:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS
        MATQTV+DSSRSGPR T VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FL IILEIYNSS+LLDGIS
Subjt:  MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGIS

Sequences

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CDS sequence

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ATGGCTACACAAACCGTTGACGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGCATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACACCTTTAATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATGTATTATTTTGGAAATTTATAATTCTTCCATTTTACTGGACGGAATTTCAAGCTAG

mRNA sequence

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Protein sequence

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MATQTVDDSSRSGPRRTIVGHLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLCIILEIYNSSILLDGISS

CcUC05G089690 (gene) of Watermelon (PI 537277) v1 genome