; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G089700 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G089700
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSplicing factor 3B subunit 4
Genome locationCicolChr05:7235597..7239799
RNA-Seq ExpressionCcUC05G089700
SyntenyCcUC05G089700
Gene Ontology termsGO:0048026 - positive regulation of mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034158 - SF3B4, RNA recognition motif 1
IPR034159 - SF3B4, RNA recognition motif 2
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067649.1 splicing factor 3B subunit 4 [Cucumis melo var. makuwa]4.3e-20397.36Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        A   KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSMPIPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

TYK23651.1 splicing factor 3B subunit 4 [Cucumis melo var. makuwa]1.4e-20698.15Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSMPIPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_004147654.1 splicing factor 3B subunit 4 [Cucumis sativus]1.7e-20798.68Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPLPPP  QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_008439058.1 PREDICTED: splicing factor 3B subunit 4 [Cucumis melo]4.5e-20597.63Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPG MMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSM IPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_038878136.1 splicing factor 3B subunit 4 [Benincasa hispida]1.4e-20698.94Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPLPPP  QAHSMPIPPPMGMGGAQP LWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAZ0 Uncharacterized protein8.1e-20898.68Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPLPPP  QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A1S3AYG3 splicing factor 3B subunit 42.2e-20597.63Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPG MMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSM IPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A5A7VR80 Splicing factor 3B subunit 42.1e-20397.36Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        A   KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSMPIPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A5D3DJ06 Splicing factor 3B subunit 46.8e-20798.15Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITP+PIPAIRP PPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP+PPP  QAHSMPIPPPMGMGGAQP LWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPLPPP--QAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A6J1C8Z7 splicing factor 3B subunit 41.3e-19796.05Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG IGAPVPPRPFANG I PSPIPAIRPPPPQGVAFPPM M GQ PAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP

Query:  PVQQFRPPPPNMPLPPPQ--AHSMPIPPPMGMGGAQPQLWRPPPPPMQ-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQ  AHSM IPPPMGMGGAQP LWRPPPPPMQ QQQPGRPPMQMSSM PPPPPNHIPPPL SSG
Subjt:  PVQQFRPPPPNMPLPPPQ--AHSMPIPPPMGMGGAQPQLWRPPPPPMQ-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

SwissProt top hitse value%identityAlignment
O14102 Spliceosome-associated protein 491.4e-6347.08Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGN
        +RNQDAT Y+GNLD +V++ +L+EL +QAGPVVN+++P+DRV N H G+GF EF  E+D +YA ++LN +KL+GKPIRVN+ASQD+  +  +GANLF+GN
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGN

Query:  LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPH
        LDP VDE++LYDTFSA G +V  P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGERHG  AER LAA+  +     
Subjt:  LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPH

Query:  TLFASGPPTL-PKVAQPNGAIGAP-------VPPRP-----FANGAITPSPIPAIRP--PPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPPPVQ
        T  ++ PP   P    P  A   P       +PP P      A  A+ P  IP + P          P MPM   P    G P          ++PPP  
Subjt:  TLFASGPPTL-PKVAQPNGAIGAP-------VPPRP-----FANGAITPSPIPAIRP--PPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPPPVQ

Query:  QFRPPPPNMPLPPPQAHSMPIPPPM
           PP   M  P P A ++P  P M
Subjt:  QFRPPPPNMPLPPPQAHSMPIPPPM

Q09442 Splicing factor 3B subunit 42.5e-8955.1Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE +LWEL VQAGPVV+V +PKDRVT  HQG+GF+EF  EEDADYAIK+LNMIKLYGKPI+VNKAS  +K++DVGAN+F+GNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP+VDEKLLYDTFSAFGVI+  PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERHGT AER+LAA NP   K RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFAS---GPPTLPKVAQP--NGAIGAPVPPRPFANGAITPSPI------------PAIRPPPPQGVAF-PPMP----MAGQPP------AWQGQPQQP
        H +F+    G P    +A P  + AI A    RP       P P+            P + PPPP      PPMP    M  +PP       W   P  P
Subjt:  HTLFAS---GPPTLPKVAQP--NGAIGAPVPPRPFANGAITPSPI------------PAIRPPPPQGVAF-PPMP----MAGQPP------AWQGQPQQP

Query:  GQMMPGSIIPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGM---GGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNH--IPPPLPSS
            PG   PP +    PPPP     PP    MP PPP GM   GG  P    PPPP      PG  P    S PP PP  H  IPPP P S
Subjt:  GQMMPGSIIPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGM---GGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNH--IPPPLPSS

Q15427 Splicing factor 3B subunit 42.4e-9254.7Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI
        H LFA  PP                 P    P G+   PVPP     GA+ P   PA+ PPP P G A    P AG P A  G P      P    PG +
Subjt:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI

Query:  IPPPVQQFR-------------------------PPPPNMPLPPPQAHSMPI--PP---PMGMGGAQPQ--LWRPPP--PPMQQQQPGRPPMQMSSMPPP
          P + Q +                          PPP MP P P    MP   PP   PMG  G  P   +  PPP  PP     P RPP       P 
Subjt:  IPPPVQQFR-------------------------PPPPNMPLPPPQAHSMPI--PP---PMGMGGAQPQ--LWRPPP--PPMQQQQPGRPPMQMSSMPPP

Query:  PPPNHIP-PPLPSSG
        PPP   P PP+P  G
Subjt:  PPPNHIP-PPLPSSG

Q6AYL5 Splicing factor 3B subunit 41.6e-9157.07Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI
        H LFA  PP                 P    P G+   PVPP     GA+ P   PA+ PPP P G      P AG P A  G P      P    PG +
Subjt:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI

Query:  IPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPP--PPPNHIPPPLPSSG
          P + Q +     +    P     P   P G GG QP    PP PP     PG PPM M    PP   P  H P P+P  G
Subjt:  IPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPP--PPPNHIPPPLPSSG

Q8QZY9 Splicing factor 3B subunit 41.6e-9157.07Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI
        H LFA  PP                 P    P G+   PVPP     GA+ P   PA+ PPP P G      P AG P A  G P      P    PG +
Subjt:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPP-PQGVAFPPMPMAGQPPAWQGQP----QQPGQMMPGSI

Query:  IPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPP--PPPNHIPPPLPSSG
          P + Q +     +    P     P   P G GG QP    PP PP     PG PPM M    PP   P  H P P+P  G
Subjt:  IPPPVQQFRPPPPNMPLPPPQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPP--PPPNHIPPPLPSSG

Arabidopsis top hitse value%identityAlignment
AT1G22760.1 poly(A) binding protein 33.3e-2834.39Show/hide
Query:  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFI
        A + + +++ Y G+LDP+V+E  L++LF     VV+V V +D+      GY +I F +  DA  A++ LN   L+ +PIR+  +++D  + L    N+FI
Subjt:  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFI

Query:  GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER
         NLD  +D K L++TFS+FG I+ + K+  D  TG S+G+GF+ ++  E++ AAI+ +NG  + ++Q+ V +  ++  +     TP  R
Subjt:  GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER

AT1G49760.1 poly(A) binding protein 81.6e-3040.57Show/hide
Query:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK
        YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN + L G+ IRV  + +D      G  N+FI NLD  +D K
Subjt:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK

Query:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER
         L++TFSAFG I+ + K+  DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Subjt:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER

AT1G49760.2 poly(A) binding protein 81.6e-3040.57Show/hide
Query:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK
        YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN + L G+ IRV  + +D      G  N+FI NLD  +D K
Subjt:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK

Query:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER
         L++TFSAFG I+ + K+  DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Subjt:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER

AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-13471.54Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTT+IAPGVGANLLGQH+ ERNQDAT YVG LD Q+SEELLWELFVQAGPVVNVYVPKDRVTNLHQ YGFIE+RSEEDADYAIKVLNMIKL+GKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL NRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSII
        TPAER+LAA+NP  QKSRPHTLFA GPP+     Q NG       PRPFANG++ P PIPA R PPP     PP     QPP+W  QPQQ       S++
Subjt:  TPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSII

Query:  PPPVQQFRPPPPNMPLPPPQ--------AHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMS--------SMPPPPP
        PPP+ QFRPP    P PPPQ            P PPP  MG  Q   W    PP   QQ G PP Q          SMPPPPP
Subjt:  PPPVQQFRPPPPNMPLPPPQ--------AHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMS--------SMPPPPP

AT4G34110.1 poly(A) binding protein 21.2e-3044.51Show/hide
Query:  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPD
        + + YVG+LD  V++  L++ F Q G VV V V +D VT    GYG++ F + +DA  AI+ LN I LYGKPIRV  + +D      GA N+FI NLD  
Subjt:  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPD

Query:  VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV
        +D K L+DTFS+FG IV + K+  D  +G S+G+GF+ Y + E++  AIE +NG  L ++Q+ V
Subjt:  VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACCGCCTATGTCGGCAATCTAGATCCACAG
GTTTCTGAGGAGTTGCTTTGGGAGCTGTTTGTTCAAGCCGGCCCAGTTGTTAATGTGTATGTGCCGAAGGATAGAGTCACTAACTTGCATCAAGGATATGGATTC
ATTGAGTTTCGAAGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAGCCAATTCGTGTAAACAAGGCATCGCAAGACAAG
AAGAGTTTGGATGTGGGGGCGAATCTCTTCATAGGAAACCTAGACCCAGATGTTGATGAGAAGCTTCTCTATGATACTTTCAGTGCATTTGGGGTCATTGTGACG
AATCCTAAGATTATGAGGGATCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGCTATGACTCCTTTGAGGCATCTGATGCAGCAATTGAGGCAATGAAT
GGTCAGTATCTTTGTAATCGTCAAATAACGGTTTCTTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGC
AATCCCCAGAAGAGTAGGCCTCACACTTTGTTTGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAGCCTAATGGTGCAATCGGAGCTCCAGTGCCACCACGC
CCCTTTGCTAATGGTGCAATCACTCCCAGCCCGATTCCTGCAATTCGTCCTCCCCCACCGCAAGGGGTGGCTTTCCCCCCTATGCCAATGGCTGGACAACCACCA
GCCTGGCAGGGTCAGCCGCAACAACCAGGTCAAATGATGCCAGGTTCCATCATTCCGCCACCAGTTCAGCAGTTCCGGCCACCTCCCCCAAACATGCCTCTCCCA
CCTCCTCAGGCACATTCCATGCCTATCCCTCCACCAATGGGAATGGGAGGAGCACAGCCACAGCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCAACCT
GGGAGGCCACCTATGCAAATGTCATCGATGCCCCCGCCGCCACCTCCAAATCACATTCCACCACCTCTTCCATCTTCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTATAAATGGTTACAAATTTTAAATTAAATTGTTACGACACGAATTTATTTATTTATTTATTTTTCTTTTTTCTTTAAACCAAAAAACAAAACCCCATAGAAA
CCTTTTAGCTCTCGCGAGTGTGCAAAGGGGTTTTGGTCTGTAATTTGTGAAACTCCAAACGCAGGCAACTGCTTCACCGACTAGCCGGAGAAGATGACGACGAAG
ATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACCGCCTATGTCGGCAATCTAGATCCACAGGTTTCTGAGGAG
TTGCTTTGGGAGCTGTTTGTTCAAGCCGGCCCAGTTGTTAATGTGTATGTGCCGAAGGATAGAGTCACTAACTTGCATCAAGGATATGGATTCATTGAGTTTCGA
AGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAGCCAATTCGTGTAAACAAGGCATCGCAAGACAAGAAGAGTTTGGAT
GTGGGGGCGAATCTCTTCATAGGAAACCTAGACCCAGATGTTGATGAGAAGCTTCTCTATGATACTTTCAGTGCATTTGGGGTCATTGTGACGAATCCTAAGATT
ATGAGGGATCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGCTATGACTCCTTTGAGGCATCTGATGCAGCAATTGAGGCAATGAATGGTCAGTATCTT
TGTAATCGTCAAATAACGGTTTCTTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAG
AGTAGGCCTCACACTTTGTTTGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAGCCTAATGGTGCAATCGGAGCTCCAGTGCCACCACGCCCCTTTGCTAAT
GGTGCAATCACTCCCAGCCCGATTCCTGCAATTCGTCCTCCCCCACCGCAAGGGGTGGCTTTCCCCCCTATGCCAATGGCTGGACAACCACCAGCCTGGCAGGGT
CAGCCGCAACAACCAGGTCAAATGATGCCAGGTTCCATCATTCCGCCACCAGTTCAGCAGTTCCGGCCACCTCCCCCAAACATGCCTCTCCCACCTCCTCAGGCA
CATTCCATGCCTATCCCTCCACCAATGGGAATGGGAGGAGCACAGCCACAGCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCAACCTGGGAGGCCACCT
ATGCAAATGTCATCGATGCCCCCGCCGCCACCTCCAAATCACATTCCACCACCTCTTCCATCTTCTGGCTGAGACATTGTTATGCTGCTAGCCATGAAAATGAGG
TTTTCTGCATGATGATCATGTTTATTTCTTTTTGTGATAATATTCATTAGGTTGTCATTGTCATACAAAATTGTTAACCACTTCAATCCGAGAGAAATTAGCAGG
AGGCAATTCGGCATTTTTGCTACAAAATGTAAAATGTTCTGATCTTAATTTTTAATAGTCTGGGATGTTTGTTAAAATG
Protein sequenceShow/hide protein sequence
MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK
KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAAS
NPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPPPVQQFRPPPPNMPLP
PPQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG