; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G089860 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G089860
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:7516123..7516800
RNA-Seq ExpressionCcUC05G089860
SyntenyCcUC05G089860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]1.3e-1764.29Show/hide
Query:  ASPRRISLVFKLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP
        +SP +ISL+ KLLFFA LL    + VSATNN+ PLLHKP IRKM +EYK   KAVVVPKV +PTS+D PWGGGY+   PIL++P
Subjt:  ASPRRISLVFKLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP

KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]2.9e-2271.59Show/hide
Query:  MLSNMASPRRISLVFKLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP
        M   MASP RI L+ KLLFF+ LLIFS VS TNN VQPL HKP IRK+ ++ K +DGKA VVP+VIKPTSEDFPWGGGYI HP LSNP
Subjt:  MLSNMASPRRISLVFKLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP

KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]2.3e-1965.56Show/hide
Query:  MLSNMA-SPRRISLVFKLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP
        M+S MA SP +ISL+ KLLFFA LL   ++ +SATNN+ PLLHKP IRKMA+ Y+   KAVVVPKV KPTS DFPWGGGY+   PIL+NP
Subjt:  MLSNMA-SPRRISLVFKLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1055.42Show/hide
Query:  MASPR--RISLVFKLLFFAFLLIFSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSN
        MASPR  RISL+ +LLFFA LL+ S  SA N+ + LLH P   KMA+EY   GK        KPT++D PWGGGY+  PILSN
Subjt:  MASPR--RISLVFKLLFFAFLLIFSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSN

XP_022141390.1 uncharacterized protein LOC111011803 [Momordica charantia]2.6e-0753.49Show/hide
Query:  LSNMASPRRISLVFKLLFFAFLLIFSIVSATNNVQPLLHK-PHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP
        L+ MAS  RIS V KL FFA LLI S VSA+    P +HK P IRK+ +EY+S GKAV+  K     S DFPW GGY  +P  +NP
Subjt:  LSNMASPRRISLVFKLLFFAFLLIFSIVSATNNVQPLLHK-PHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP

TrEMBL top hitse value%identityAlignment
A0A0A0KZM0 Uncharacterized protein1.7e-0448.53Show/hide
Query:  ISLVFKLLFFAFLLIFSIVSATNNVQPLLHKPHIR-KMALEYKSDGKAVVVPKVIKPTSEDFPWGGGY
        I ++FKLLFF  LLI    + ++  QP LH+PH R KM +EY+S  KA +     KP   DFPW GGY
Subjt:  ISLVFKLLFFAFLLIFSIVSATNNVQPLLHKPHIR-KMALEYKSDGKAVVVPKVIKPTSEDFPWGGGY

A0A0A0L653 Uncharacterized protein2.4e-2273.81Show/hide
Query:  MASPRRISLVFKLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP
        MASP RI L+ KLLFF+ LLIFS VS TNN VQPL HKP IRK+ ++ K +DGKA VVP+VIKPTSEDFPWGGGYI HP LSNP
Subjt:  MASPRRISLVFKLLFFAFLLIFSIVSATNN-VQPLLHKPHIRKMALEYK-SDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP

A0A0A0L8B2 Uncharacterized protein4.2e-1965.48Show/hide
Query:  ASPRRISLVFKLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP
        +SP +ISL+ KLLFFA LL   ++ +SATNN+ PLLHKP IRKMA+ Y+   KAVVVPKV KPTS DFPWGGGY+   PIL+NP
Subjt:  ASPRRISLVFKLLFFAFLLI--FSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP

A0A5D3DJ60 Uncharacterized protein6.1e-1864.29Show/hide
Query:  ASPRRISLVFKLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP
        +SP +ISL+ KLLFFA LL    + VSATNN+ PLLHKP IRKM +EYK   KAVVVPKV +PTS+D PWGGGY+   PIL++P
Subjt:  ASPRRISLVFKLLFFAFLLIF--SIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDH-PILSNP

A0A6J1CHY3 uncharacterized protein LOC1110118031.3e-0753.49Show/hide
Query:  LSNMASPRRISLVFKLLFFAFLLIFSIVSATNNVQPLLHK-PHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP
        L+ MAS  RIS V KL FFA LLI S VSA+    P +HK P IRK+ +EY+S GKAV+  K     S DFPW GGY  +P  +NP
Subjt:  LSNMASPRRISLVFKLLFFAFLLIFSIVSATNNVQPLLHK-PHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAAATATGGCTTCCCCTAGGAGGATTTCCCTGGTGTTCAAGCTTCTTTTCTTTGCTTTCCTTCTCATTTTCTCTATTGTTTCTGCAACCAATAACGTC
CAGCCTTTGCTTCACAAACCTCATATTCGTAAAATGGCTCTGGAGTACAAAAGTGATGGGAAGGCTGTTGTTGTTCCTAAAGTAATCAAACCAACTTCTGAGGAT
TTCCCATGGGGGGGAGGTTATATTGATCATCCAATCTTAAGCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
TTTTTACTATCAATGGATCGGAGTTGTAGCTTAAATTTGCCTATAAATACAAATACATAAGATTAGCTCTTCAGCTACCTCCATCTATGCTTATTAATGCTCTCA
AATATGGCTTCCCCTAGGAGGATTTCCCTGGTGTTCAAGCTTCTTTTCTTTGCTTTCCTTCTCATTTTCTCTATTGTTTCTGCAACCAATAACGTCCAGCCTTTG
CTTCACAAACCTCATATTCGTAAAATGGCTCTGGAGTACAAAAGTGATGGGAAGGCTGTTGTTGTTCCTAAAGTAATCAAACCAACTTCTGAGGATTTCCCATGG
GGGGGAGGTTATATTGATCATCCAATCTTAAGCAACCCATGA
Protein sequenceShow/hide protein sequence
MLSNMASPRRISLVFKLLFFAFLLIFSIVSATNNVQPLLHKPHIRKMALEYKSDGKAVVVPKVIKPTSEDFPWGGGYIDHPILSNP