; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G090300 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G090300
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:7918684..7921218
RNA-Seq ExpressionCcUC05G090300
SyntenyCcUC05G090300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR36900.1 unknown [Zea mays]1.7e-0543.4Show/hide
Query:  ADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTL
        AD EG G+K LQLT R+S SL    V  +RSSM    T   S  ++    LGGMK  AGGR V S  P+  R+      L  S +   V  S KV KGT 
Subjt:  ADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTL

Query:  KKLGGL
        +  GGL
Subjt:  KKLGGL

KAF7820843.1 hypothetical protein G2W53_026298 [Senna tora]4.6e-1440.43Show/hide
Query:  MFDRRVSPATWSKSLVRVTPSFPSMSSSRKADREGEGQK--------PLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQ
        MFDRRVSPATWS+S   VTP  P  SSS  A++    +         P+   +++ +SL   ++L       G                G + C+AGGR 
Subjt:  MFDRRVSPATWSKSLVRVTPSFPSMSSSRKADREGEGQK--------PLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQ

Query:  VCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTLKKL
        V SLCPE++R+LAMK MLSL K     AFSR VE G L+ L
Subjt:  VCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTLKKL

PON59998.1 hypothetical protein TorRG33x02_286450 [Trema orientale]1.2e-0668.75Show/hide
Query:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDS
        R  +REGEGQ PLQ TIRISIS  E  VL KRSSM G   IWTSLM+S
Subjt:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDS

PON69981.1 hypothetical protein PanWU01x14_084450 [Parasponia andersonii]5.8e-0967.86Show/hide
Query:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGM
        R  +REGEGQ PLQ TI ISIS  E  VLVKRSSM G   IWTSLM+S R VLGG+
Subjt:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGM

TrEMBL top hitse value%identityAlignment
A0A0A0L5P9 Uncharacterized protein4.3e-3493.83Show/hide
Query:  MTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTLKKLGGLRHEKSTK
        MTGN+T+WTSLMDSC WVLGGMKCRAGGRQVCSLCPEDLRVLAMKL+LSLSKISI VAFSRKVEKGTLKKLGGLRHEKSTK
Subjt:  MTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTLKKLGGLRHEKSTK

A0A2P5CG56 Uncharacterized protein5.8e-0768.75Show/hide
Query:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDS
        R  +REGEGQ PLQ TIRISIS  E  VL KRSSM G   IWTSLM+S
Subjt:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDS

A0A2P5D9L7 Uncharacterized protein2.8e-0967.86Show/hide
Query:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGM
        R  +REGEGQ PLQ TI ISIS  E  VLVKRSSM G   IWTSLM+S R VLGG+
Subjt:  RKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGM

C4J6V0 Uncharacterized protein8.4e-0643.4Show/hide
Query:  ADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTL
        AD EG G+K LQLT R+S SL    V  +RSSM    T   S  ++    LGGMK  AGGR V S  P+  R+      L  S +   V  S KV KGT 
Subjt:  ADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIWTSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTL

Query:  KKLGGL
        +  GGL
Subjt:  KKLGGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCACACAAGATCATGCAAGAGGATTTTGAAGAAATTAGCCTCGACGCCCCATGCCGTAGTTTCTCTCCAACTGGCAACATTGAAGCTCCCAGAATCGAT
ATGTTTGATCGGAGGGTTTCTCCGGCGACTTGGAGTAAATCTCTTGTCAGAGTGACGCCGAGTTTTCCGTCCATGTCCTCTTCGCGTAAGGCTGATAGGGAAGGA
GAAGGGCAAAAGCCACTGCAATTGACAATAAGAATATCAATATCGCTAGAAGAGAGATGGGTTTTGGTTAAAAGGTCATCCATGACAGGAAACAACACCATATGG
ACTTCATTAATGGATTCCTGTAGATGGGTTTTGGGTGGTATGAAATGCAGGGCTGGAGGGAGACAAGTTTGTTCACTCTGTCCAGAAGACTTGAGAGTTCTGGCC
ATGAAATTGATGCTCTCACTGTCAAAAATATCCATCAGCGTGGCATTTTCAAGGAAAGTAGAGAAGGGAACCCTGAAGAAGCTTGGTGGTTTGAGGCATGAGAAG
TCAACTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCACACAAGATCATGCAAGAGGATTTTGAAGAAATTAGCCTCGACGCCCCATGCCGTAGTTTCTCTCCAACTGGCAACATTGAAGCTCCCAGAATCGAT
ATGTTTGATCGGAGGGTTTCTCCGGCGACTTGGAGTAAATCTCTTGTCAGAGTGACGCCGAGTTTTCCGTCCATGTCCTCTTCGCGTAAGGCTGATAGGGAAGGA
GAAGGGCAAAAGCCACTGCAATTGACAATAAGAATATCAATATCGCTAGAAGAGAGATGGGTTTTGGTTAAAAGGTCATCCATGACAGGAAACAACACCATATGG
ACTTCATTAATGGATTCCTGTAGATGGGTTTTGGGTGGTATGAAATGCAGGGCTGGAGGGAGACAAGTTTGTTCACTCTGTCCAGAAGACTTGAGAGTTCTGGCC
ATGAAATTGATGCTCTCACTGTCAAAAATATCCATCAGCGTGGCATTTTCAAGGAAAGTAGAGAAGGGAACCCTGAAGAAGCTTGGTGGTTTGAGGCATGAGAAG
TCAACTAAGTAG
Protein sequenceShow/hide protein sequence
MNAHKIMQEDFEEISLDAPCRSFSPTGNIEAPRIDMFDRRVSPATWSKSLVRVTPSFPSMSSSRKADREGEGQKPLQLTIRISISLEERWVLVKRSSMTGNNTIW
TSLMDSCRWVLGGMKCRAGGRQVCSLCPEDLRVLAMKLMLSLSKISISVAFSRKVEKGTLKKLGGLRHEKSTK