; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G090560 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G090560
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLOB domain-containing protein
Genome locationCicolChr05:8231101..8232345
RNA-Seq ExpressionCcUC05G090560
SyntenyCcUC05G090560
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-7291.16Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIA LASN+QE QL DF  +PIQGPNTIGFSQIGLSTPAH+FNS
Subjt:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]1.8e-7392.57Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAE L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQE-PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIAC+ASNVQE PQ QDF FEPIQGPN++GFSQIGLSTPAH FNS
Subjt:  TRAEIACLASNVQE-PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]3.0e-7391.28Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAE L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQE--PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIAC+ASNVQE  PQLQDF F+PIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACLASNVQE--PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]2.9e-7191.89Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAE LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNV-QEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIA LASN+ QE Q QDF  EPIQGPNTIGFSQIGLSTPAH+FNS
Subjt:  TRAEIACLASNV-QEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]1.3e-7191.16Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIA LASN+QE Q QDF  +PIQGPNTIGFSQIGLSTPAH+FNS
Subjt:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein8.7e-7492.57Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAE L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQE-PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIAC+ASNVQE PQ QDF FEPIQGPN++GFSQIGLSTPAH FNS
Subjt:  TRAEIACLASNVQE-PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

A0A0A0LLX6 LOB domain-containing protein1.7e-5375.17Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI  RCAACKYLRRRC ++CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR EAAE L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQEPQLQDFVF-EPIQGPNTIGFSQIGLSTPAHF
        TRAEIA LASN Q+ Q +DF F +P  GP        GLSTPAHF
Subjt:  TRAEIACLASNVQEPQLQDFVF-EPIQGPNTIGFSQIGLSTPAHF

A0A1S3AY36 LOB domain-containing protein 24-like1.5e-7391.28Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAE L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQE--PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIAC+ASNVQE  PQLQDF F+PIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIACLASNVQE--PQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

A0A6J1E5I6 LOB domain-containing protein 24-like2.0e-7089.8Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC +DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIA LASN+QE Q  DF  +PIQGPNTIGFSQIGLSTPAH+FNS
Subjt:  TRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

A0A6J1JCD0 LOB domain-containing protein 24-like1.4e-7191.89Show/hide
Query:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAE LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIACLASNV-QEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS
        TRAEIA LASN+ QE Q QDF  EPIQGPNTIGFSQIGLSTPAH+FNS
Subjt:  TRAEIACLASNV-QEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 235.1e-3961.54Show/hide
Query:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACLASNVQEPQLQDFV
        IA   + + +  + DF+
Subjt:  IACLASNVQEPQLQDFV

P59468 LOB domain-containing protein 245.1e-3962.39Show/hide
Query:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACLASNVQEPQLQDFV
        IA   + + + Q  DF+
Subjt:  IACLASNVQEPQLQDFV

Q8LBW3 LOB domain-containing protein 122.7e-3255.17Show/hide
Query:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIACLASNVQEPQLQ
        AEI C+     EP LQ
Subjt:  AEIACLASNVQEPQLQ

Q9FKZ3 LOB domain-containing protein 362.4e-2850.96Show/hide
Query:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA

Q9SHE9 LOB domain-containing protein 42.5e-3056.31Show/hide
Query:  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  ACL
          L
Subjt:  ACL

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 41.8e-3156.31Show/hide
Query:  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  ACL
          L
Subjt:  ACL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.9e-3355.17Show/hide
Query:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIACLASNVQEPQLQ
        AEI C+     EP LQ
Subjt:  AEIACLASNVQEPQLQ

AT3G26620.1 LOB domain-containing protein 233.6e-4061.54Show/hide
Query:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACLASNVQEPQLQDFV
        IA   + + +  + DF+
Subjt:  IACLASNVQEPQLQDFV

AT3G26660.1 LOB domain-containing protein 243.6e-4062.39Show/hide
Query:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IACLASNVQEPQLQDFV
        IA   + + + Q  DF+
Subjt:  IACLASNVQEPQLQDFV

AT5G66870.1 ASYMMETRIC LEAVES 2-like 11.7e-2950.96Show/hide
Query:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGGAAAGAAGTACTGAAGTCGAGAGGCAATAAGATTTTTAGCATGATTTCGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCAT
TTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTTACTATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAA
GAGCTGAAGCAGCAGAAGCTTTATTTTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGGATTATTTCTCAATTACAACACCAATTACACGTGGCA
GAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTAT
TGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTTAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGGAAAGAAGTACTGAAGTCGAGAGGCAATAAGATTTTTAGCATGATTTCGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCAT
TTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTTACTATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAA
GAGCTGAAGCAGCAGAAGCTTTATTTTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGGATTATTTCTCAATTACAACACCAATTACACGTGGCA
GAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTAT
TGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTTAATTCATAA
Protein sequenceShow/hide protein sequence
MVRKEVLKSRGNKIFSMISGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAEALFFEAKCRIEDPVYGCVGIISQLQHQLHVA
ETQLAKTRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFFNS