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CcUC05G093060 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G093060
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:11019451..11020062
RNA-Seq ExpressionCcUC05G093060
SyntenyCcUC05G093060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OQU81910.1 hypothetical protein SORBI_3006G139501 [Sorghum bicolor]1.1e-0430.41Show/hide
Query:  KNLRRNKPSEEIESDIEERQISDTQNGNWERTRQ-------LLIEIFERCNFGSDCARKVVGVGMEDGKVREAIDEAVKRRGSELEAIEIDTCDGNSGFV
        ++ RR  P E +E D++E  + + Q+   ER R+        L+E+ +        A +VVGVG+E  +VRE +DEA++    +  A+E+D  DG    V
Subjt:  KNLRRNKPSEEIESDIEERQISDTQNGNWERTRQ-------LLIEIFERCNFGSDCARKVVGVGMEDGKVREAIDEAVKRRGSELEAIEIDTCDGNSGFV

Query:  VRGVVAEEAFVLTDIRANPCLCDAQWVRSDEGFEGLNDGVHHGQSLNL
         R +  E       +RA P   D   V      E L+  V   Q L L
Subjt:  VRGVVAEEAFVLTDIRANPCLCDAQWVRSDEGFEGLNDGVHHGQSLNL
TrEMBL top hitse value%identityAlignment
A0A1Z5RDS7 Uncharacterized protein5.6e-0530.41Show/hide
Query:  KNLRRNKPSEEIESDIEERQISDTQNGNWERTRQ-------LLIEIFERCNFGSDCARKVVGVGMEDGKVREAIDEAVKRRGSELEAIEIDTCDGNSGFV
        ++ RR  P E +E D++E  + + Q+   ER R+        L+E+ +        A +VVGVG+E  +VRE +DEA++    +  A+E+D  DG    V
Subjt:  KNLRRNKPSEEIESDIEERQISDTQNGNWERTRQ-------LLIEIFERCNFGSDCARKVVGVGMEDGKVREAIDEAVKRRGSELEAIEIDTCDGNSGFV

Query:  VRGVVAEEAFVLTDIRANPCLCDAQWVRSDEGFEGLNDGVHHGQSLNL
         R +  E       +RA P   D   V      E L+  V   Q L L
Subjt:  VRGVVAEEAFVLTDIRANPCLCDAQWVRSDEGFEGLNDGVHHGQSLNL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAATTCTTTACAAAAACCTGCGGAGGAACAAACCCAGTGAAGAAATTGAATCTGATATCGAAGAACGACAGATCAGTGACACTCAAAATGGCAACTGGGAAAG
GACCCGACAGTTGCTCATAGAGATATTTGAGCGATGCAATTTTGGGAGTGATTGTGCCAGAAAAGTTGTTGGAGTTGGCATGGAAGATGGCAAGGTCAGGGAGGCCATCG
ATGAAGCCGTCAAGCGTCGGGGCAGTGAGTTGGAAGCCATTGAAATCGATACCTGCGATGGCAACAGCGGATTTGTTGTCCGGGGGGTTGTCGCAGAAGAAGCCTTTGTA
CTTACAGATATCAGAGCCAACCCATGTTTGTGTGATGCCCAATGGGTCAGAAGTGATGAGGGCTTTGAAGGTCTGAATGATGGGGTACACCACGGCCAGTCGTTGAATCT
GAGGCATTGGCAAGTTTTTGGCGGTGGCGGTAGCGGTAGCGGTGGTGGGGATTCCGGCGGTGGCGGCGGCAGCGGAGGTGGGGGACATCTGGTTGAGTATACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAATTCTTTACAAAAACCTGCGGAGGAACAAACCCAGTGAAGAAATTGAATCTGATATCGAAGAACGACAGATCAGTGACACTCAAAATGGCAACTGGGAAAG
GACCCGACAGTTGCTCATAGAGATATTTGAGCGATGCAATTTTGGGAGTGATTGTGCCAGAAAAGTTGTTGGAGTTGGCATGGAAGATGGCAAGGTCAGGGAGGCCATCG
ATGAAGCCGTCAAGCGTCGGGGCAGTGAGTTGGAAGCCATTGAAATCGATACCTGCGATGGCAACAGCGGATTTGTTGTCCGGGGGGTTGTCGCAGAAGAAGCCTTTGTA
CTTACAGATATCAGAGCCAACCCATGTTTGTGTGATGCCCAATGGGTCAGAAGTGATGAGGGCTTTGAAGGTCTGAATGATGGGGTACACCACGGCCAGTCGTTGAATCT
GAGGCATTGGCAAGTTTTTGGCGGTGGCGGTAGCGGTAGCGGTGGTGGGGATTCCGGCGGTGGCGGCGGCAGCGGAGGTGGGGGACATCTGGTTGAGTATACATAG
Protein sequenceShow/hide protein sequence
MVKILYKNLRRNKPSEEIESDIEERQISDTQNGNWERTRQLLIEIFERCNFGSDCARKVVGVGMEDGKVREAIDEAVKRRGSELEAIEIDTCDGNSGFVVRGVVAEEAFV
LTDIRANPCLCDAQWVRSDEGFEGLNDGVHHGQSLNLRHWQVFGGGGSGSGGGDSGGGGGSGGGGHLVEYT