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CcUC05G093160 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G093160
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:11158091..11160288
RNA-Seq ExpressionCcUC05G093160
SyntenyCcUC05G093160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD95408.1 hypothetical protein C1H46_018966 [Malus baccata]7.0e-0646.88Show/hide
Query:  LTSGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPP
        + +G +DDEPV N+  L P E  V VI L HF+   Q  LF + ++ LCL HA  +APC  LPP
Subjt:  LTSGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPP
TrEMBL top hitse value%identityAlignment
A0A540M9P1 Uncharacterized protein3.4e-0646.88Show/hide
Query:  LTSGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPP
        + +G +DDEPV N+  L P E  V VI L HF+   Q  LF + ++ LCL HA  +APC  LPP
Subjt:  LTSGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPP
J3MX91 Uncharacterized protein4.4e-0628.57Show/hide
Query:  SGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPPCPSPRPPKQNQSKRQGKQSINLIRFRARNLP-SIRRGE
        +G V+DE V+++VLLQPL+  V V+ L H + G    L   +++ L    A+D    + LP        +  Q  R  ++          NLP  + +GE
Subjt:  SGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPPCPSPRPPKQNQSKRQGKQSINLIRFRARNLP-SIRRGE

Query:  TNCNGIRLERMKNRDGVDNVIERVNGSFHLSVVGADQVLVGTEMFQSLLPLLLRRAYHRHVVAQSFCHFHTHMPNATQPQNS
              R +R+  R  V++ +       HL+ V AD+ LVG ++ Q LLPL  RRA + H  A+        +    +  N+
Subjt:  TNCNGIRLERMKNRDGVDNVIERVNGSFHLSVVGADQVLVGTEMFQSLLPLLLRRAYHRHVVAQSFCHFHTHMPNATQPQNS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACATAATCATTCCGCTGTCTTTTCCCTCACCAATCGCCGGCGCCGATCAGCTTCACTGAGGCAGCTTACTTCCGGCGATGTCGACGACGAACCTGTATCTAACAT
CGTTCTTCTCCAACCTCTCGAAAGCCTTGTTTATGTAATCAAGCTTTATCACTTCAATCATGGAGCTCAGCTCCCTCTCTTTAAAAAAATCCAATACTTCTTGTGTCTCT
GTCATGCTTCCGATGAAGCTCCCTGTAATCGTCTTCCTCCCTGTCCATCCCCCCGCCCCCCCAAACAAAACCAGAGTAAAAGACAGGGCAAACAGAGCATCAATTTGATT
AGATTCAGAGCGAGAAATTTACCGAGCATAAGGAGAGGGGAAACGAATTGCAATGGGATACGGCTCGAGCGGATGAAAAACAGGGACGGTGTCGATAATGTAATCGAGCG
AGTCAATGGCTCGTTCCATTTGAGTGTTGTTGGAGCTGACCAAGTACTCGTCGGCACCGAGATGTTCCAGAGCCTCCTCCCTCTTCTTCTCCGACGAGCTTATCACCGTC
ACGTGGTGGCCCAAAGCTTTTGCCACTTTCACACCCATATGCCCAACGCCACCCAGCCCCAAAATTCCGCCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACATAATCATTCCGCTGTCTTTTCCCTCACCAATCGCCGGCGCCGATCAGCTTCACTGAGGCAGCTTACTTCCGGCGATGTCGACGACGAACCTGTATCTAACAT
CGTTCTTCTCCAACCTCTCGAAAGCCTTGTTTATGTAATCAAGCTTTATCACTTCAATCATGGAGCTCAGCTCCCTCTCTTTAAAAAAATCCAATACTTCTTGTGTCTCT
GTCATGCTTCCGATGAAGCTCCCTGTAATCGTCTTCCTCCCTGTCCATCCCCCCGCCCCCCCAAACAAAACCAGAGTAAAAGACAGGGCAAACAGAGCATCAATTTGATT
AGATTCAGAGCGAGAAATTTACCGAGCATAAGGAGAGGGGAAACGAATTGCAATGGGATACGGCTCGAGCGGATGAAAAACAGGGACGGTGTCGATAATGTAATCGAGCG
AGTCAATGGCTCGTTCCATTTGAGTGTTGTTGGAGCTGACCAAGTACTCGTCGGCACCGAGATGTTCCAGAGCCTCCTCCCTCTTCTTCTCCGACGAGCTTATCACCGTC
ACGTGGTGGCCCAAAGCTTTTGCCACTTTCACACCCATATGCCCAACGCCACCCAGCCCCAAAATTCCGCCTCTTAG
Protein sequenceShow/hide protein sequence
MVHNHSAVFSLTNRRRRSASLRQLTSGDVDDEPVSNIVLLQPLESLVYVIKLYHFNHGAQLPLFKKIQYFLCLCHASDEAPCNRLPPCPSPRPPKQNQSKRQGKQSINLI
RFRARNLPSIRRGETNCNGIRLERMKNRDGVDNVIERVNGSFHLSVVGADQVLVGTEMFQSLLPLLLRRAYHRHVVAQSFCHFHTHMPNATQPQNSAS