; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G093630 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G093630
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCicolChr05:12064216..12067998
RNA-Seq ExpressionCcUC05G093630
SyntenyCcUC05G093630
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060718.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa]1.7e-16382.67Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FR RN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGS------------------------------------QVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRIIFLGS                                    QVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIIFLGS------------------------------------QVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        DEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQ G+GSDEERGSQQETE PSPV
Subjt:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]6.1e-16991.45Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FR RN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        KAKKNLPSE+KIL+NGYQ G+GSDEERGSQQETE PSPV
Subjt:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]2.3e-16890.86Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM
        MELSFT+APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFR RN SVPVV  PS +SSSLRRTLSSNWDV  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGYQE-GQGSDEERGSQQETERPSPV
        AKKNLPSE+KIL+NGY+E GQGSD+ERG QQETE PSPV
Subjt:  AKKNLPSENKILQNGYQE-GQGSDEERGSQQETERPSPV

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]2.0e-16788.99Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFTY PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  RT  S P+VK SL+SSS+RRTLSSNWDVL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        KNLPSE+KILQNGYQ GQG+DEERG+QQETE PSPV
Subjt:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]2.3e-17693.75Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        MELSFTYAPS SPHRLMR DHG  SS+FPIS PSKHSHGGNSTSNAFR RNSVPVV PS NSSSLRRTLSS+WDVLDNYSASSAPSLPRFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAK+YGLIDEVIDDGKPGL+AP AEATPPPKTRVWDLWKVEGSRK K
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        KNLPSENKILQNGYQEGQGSDEERGSQQETE  SPV
Subjt:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit1.1e-16890.86Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM
        MELSFT+APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFR RN SVPVV  PS +SSSLRRTLSSNWDV  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
Subjt:  LLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGYQE-GQGSDEERGSQQETERPSPV
        AKKNLPSE+KIL+NGY+E GQGSD+ERG QQETE PSPV
Subjt:  AKKNLPSENKILQNGYQE-GQGSDEERGSQQETERPSPV

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit3.0e-16991.45Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FR RN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        KAKKNLPSE+KIL+NGYQ G+GSDEERGSQQETE PSPV
Subjt:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

A0A5A7UZN2 ATP-dependent Clp protease proteolytic subunit8.3e-16482.67Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FR RN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRTRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGS------------------------------------QVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRIIFLGS                                    QVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIIFLGS------------------------------------QVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        DEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQ G+GSDEERGSQQETE PSPV
Subjt:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit9.5e-16888.99Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFTY PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  RT  S P+VK SL+SSS+RRTLSSNWDVL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV
        KNLPSE+KILQNGYQ GQG+DEERG+QQETE PSPV
Subjt:  KNLPSENKILQNGYQEGQGSDEERGSQQETERPSPV

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit1.7e-16187.57Show/hide
Query:  MELSFTYAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPV--VKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFTYAPSPS H RLM F+HG L+S FP+STP KHSHG NS+SNAFR R SVPV  VK SL+SS LRRTLSSNWDVL NYSA+SAP+LPRFEELDTTN
Subjt:  MELSFTYAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPV--VKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEA PPPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSP
        KAKKNLPSE KILQNGY   QGSDEER  Q ETE PSP
Subjt:  KAKKNLPSENKILQNGYQEGQGSDEERGSQQETERPSP

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 21.5e-5661.63Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PL++IE DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 11.1e-5662.43Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+++I  DT+RD FM+P EA++YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 31.5e-5661.63Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PL++IE DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 16.6e-5762.43Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+++I  DT+RD FM+P EAK+YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic4.8e-11669.4Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F  R+S+ + KP       R+TLSSNWDV     +  A S   LP FEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDD+TAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.7e-5251.22Show/hide
Query:  WDVLDNYSASSAPSLPRFEE------------LDTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCK
        W + D+    S+P  P + +                + L + RII  G  VDD  A+ I++QLL+LDA DPTKDI +++NSPGGSVTAGM I+D M+  +
Subjt:  WDVLDNYSASSAPSLPRFEE------------LDTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCK

Query:  ADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGL
         DVSTVC+GLAASMGAFLL++G+KGKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ L++I  DTDRD FM+  EAKEYGL
Subjt:  ADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGL

Query:  IDEVI
        ID VI
Subjt:  IDEVI

AT1G11750.1 CLP protease proteolytic subunit 62.5e-3541.95Show/hide
Query:  LDTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN
        LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + IYD M   K  V TV  G+AAS GA LLA G KG R+ MPN
Subjt:  LDTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN

Query:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
         RVMIHQP    GG   ++  ++ E    + K++++++  TG+PL++++  T+RD F++  EA E+GLID +++
Subjt:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 33.4e-11769.4Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F  R+S+ + KP       R+TLSSNWDV     +  A S   LP FEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDD+TAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

AT5G23140.1 nuclear-encoded CLP protease P73.6e-4245.4Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I +++NSPGG VTAG+ IYD M+  ++ +ST+CLG AASM + LLA+G+KG+R  +PN 
Subjt:  DTTNMLLRQRIIFLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDD
         VMIHQP G   G+A +++I  +++      LN+++ + TG+PL  +  + DRD+FM P EAK +G+IDEVID+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P42.2e-5244.23Show/hide
Query:  SSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSS--NWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDITADFIISQ
        SS  P    S+ +   +++S++F   N++ +    L S  LR T  S   +       + +  S  R  E D   +LLR+RI+FLGS +DD  AD I+SQ
Subjt:  SSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSS--NWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDITADFIISQ

Query:  LLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK
        LL LDA+DP KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS  + +L +G+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K
Subjt:  LLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK

Query:  IKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPP
          +  I +  T +  +Q+  D DRD +M+P EA EYGLID VID      + P+ +   P
Subjt:  IKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCCTCATAGGCTTATGCGCTTCGACCATGGATTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAG
CACTCCCATGGCGGCAATTCCACTTCAAATGCTTTTAGAACCAGAAATTCGGTTCCGGTAGTAAAGCCCTCGCTTAATTCCTCTTCTCTCAGACGGACCTTATCC
AGTAATTGGGATGTTTTGGACAACTATTCTGCATCTTCCGCTCCATCGCTGCCTCGATTCGAAGAGCTTGACACTACCAACATGCTTCTCCGCCAGCGAATCATC
TTCTTGGGTTCTCAGGTTGATGACATAACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACGAAAGATATTAAATTGTTTATCAAC
TCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCTGATGTTTCAACTGTTTGTCTGGGACTGGCTGCATCCATGGGA
GCATTTCTTCTAGCTTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACTGAG
ATGAGCATACGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCCAGAATAACAGGAAAGCCACTACAGCAGATTGAATTCGACACAGAT
CGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATTGATGATGGGAAGCCTGGACTTGTTGCTCCAATTGCAGAGGCAACT
CCTCCACCGAAAACCCGAGTTTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCCAAGAAGAATTTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAA
GAGGGTCAAGGAAGTGACGAGGAGCGCGGTAGCCAGCAGGAAACAGAAAGACCGAGTCCTGTATGA
mRNA sequenceShow/hide mRNA sequence
CTTCCCTTTCATCTTAGAGAGTAGAGGGAAATAGAGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCCTCATAGGCTTATGCGCTTCGACCATGGA
TTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAGCACTCCCATGGCGGCAATTCCACTTCAAATGCTTTTAGAACCAGAAATTCGGTTCCGGTAGTAAAG
CCCTCGCTTAATTCCTCTTCTCTCAGACGGACCTTATCCAGTAATTGGGATGTTTTGGACAACTATTCTGCATCTTCCGCTCCATCGCTGCCTCGATTCGAAGAG
CTTGACACTACCAACATGCTTCTCCGCCAGCGAATCATCTTCTTGGGTTCTCAGGTTGATGACATAACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGAT
GCTGAAGACCCAACGAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCTGAT
GTTTCAACTGTTTGTCTGGGACTGGCTGCATCCATGGGAGCATTTCTTCTAGCTTCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATC
CATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACTGAGATGAGCATACGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCCAGAATA
ACAGGAAAGCCACTACAGCAGATTGAATTCGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATTGATGAT
GGGAAGCCTGGACTTGTTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACCCGAGTTTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCCAAGAAGAAT
TTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAAGAGGGTCAAGGAAGTGACGAGGAGCGCGGTAGCCAGCAGGAAACAGAAAGACCGAGTCCTGTATGA
CACAAGACTTCACCCGTTCCTCTTCTTCCTACATCCCTCTGCCTCTATGGTTGTATCCTAGCTTGTTCTTTCCATTCTCAAATAGCTCTTTCTCTGTAAGATATT
AAAGGTGATTATTTACCAATCAGTTGAACAAGTATAGGTTTTGGAAAATTCAAGAGTCCTCTCCCCTTGTCTAGATGCTAAAGTATTGCTCGAGTTGATATTGAA
TCTGTCTCAAAACCTCGGCTCAAATGTGCAACGGACCACCAATGCTCATGATTCTGAGTAAGTTGCTGCAAACTTGAATGGAAAGTTTCTATGAGTTTTGTAGCT
CTCTCTCTGGTAGGTTGAGATTTTGATTAAGATGGAAGGCAGGTGATAATGTTTGAATTCAAGATAGTCATGCAATGCATTGCTAAATAGGAAAGTCTTTCTACC
TCTTGTGTGGAAGATTAGGATGCTGCTGTTGCATGTTATAACTTACAGTTGTAGTTCAGTATTGAGGCTATTTGATGCATATACACTCTGAGATGGCATTACCAT
CAATATATTTCTAAGAAAGAGGAAA
Protein sequenceShow/hide protein sequence
MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRTRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLLRQRII
FLGSQVDDITADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATE
MSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQ
EGQGSDEERGSQQETERPSPV