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CcUC05G096430 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G096430
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncilia- and flagella-associated protein 20
Genome locationCicolChr05:21491864..21493862
RNA-Seq ExpressionCcUC05G096430
SyntenyCcUC05G096430
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007714 - CFA20 domain
IPR040441 - Cilia- and flagella-associated protein 20/CFAP20DC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK38178.1 unknown [Lotus japonicus]6.0e-4083.16Show/hide
Query:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MIRMSD  FELL  K A+TR+KPYICT+PL+MD+GWNQIQ NLADFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

KAF3963418.1 hypothetical protein CMV_012192 [Castanea mollissima]3.0e-3988.76Show/hide
Query:  GAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        G  ELL FK A+TR+KPYICTMPLRMDEGWNQIQLNLADFTR+AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  GAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

QCD85745.1 Cilia/flagella-associated protein 20/WDR90/C3orf67 [Vigna unguiculata]6.0e-4084.04Show/hide
Query:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK
        MSD  FEL  FK A+TR+KPYICTMPLRMD+GWNQIQ NLADFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP QV+
Subjt:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK

XP_014621802.1 cilia- and flagella-associated protein 20 [Glycine max]1.2e-4085.26Show/hide
Query:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MIRMSD  FEL  FK A+TR+KPYICTMPLRMDEGWNQIQ NL DFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

XP_028190490.1 cilia- and flagella-associated protein 20-like [Glycine soja]1.7e-3983.16Show/hide
Query:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MIRMSD  FE   FK A+TR+KPY+CTMPLRMDEGWNQIQ NLADFT++AYGTNYVETL VQ HANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

TrEMBL top hitse value%identityAlignment
A0A2Z6MQI8 DUF667 domain-containing protein9.3e-3983.7Show/hide
Query:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MSD  FELL  K  +TR+KPYICTMPLRMD+GWNQIQ NLADFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

A0A4D6LBK7 Cilia/flagella-associated protein 20/WDR90/C3orf672.9e-4084.04Show/hide
Query:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK
        MSD  FEL  FK A+TR+KPYICTMPLRMD+GWNQIQ NLADFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP QV+
Subjt:  MSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK

A0A5A7SZY2 Cilia-and flagella-associated protein 20 isoform X37.1e-3995.12Show/hide
Query:  AITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVKF
        AITR+KPYICTMPLRMDEGWN IQLNLADFTR+AYGTNYVETL VQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVKF
Subjt:  AITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVKF

A0A6M2FBN6 DUF667 domain-containing protein4.4e-4185.26Show/hide
Query:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MIRMS G  EL TFK  +TR+KPYICTMPL++DEGWNQIQLNLADFTR+AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

I3SD36 DUF667 domain-containing protein2.9e-4083.16Show/hide
Query:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        MIRMSD  FELL  K A+TR+KPYICT+PL+MD+GWNQIQ NLADFT++AYGTNYVETL VQVHANCRLRRIYF+DRLYSEEELPPEFKLYLP Q
Subjt:  MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

SwissProt top hitse value%identityAlignment
A0CDD4 Cilia- and flagella-associated protein 201.6e-3581.82Show/hide
Query:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        TR+KP+ICTMP+R+DEGWNQIQ NL+DFTR+AYGTNY+ETL VQ+HANCR+RRIYF+DRLYSEEELPPEFKL+LP Q
Subjt:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

Q5ZHP3 Cilia- and flagella-associated protein 201.3e-3477.22Show/hide
Query:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK
        TR+KP+ICTMP+R+D+GWNQIQ NL+DFTR+AYGTNY+ETL VQ+HANCR+RR+YF+DRLYSE+ELP EFKLYLP Q K
Subjt:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK

Q6B857 Cilia- and flagella-associated protein 201.3e-3477.22Show/hide
Query:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK
        TR+KP+ICTMP+R+D+GWNQIQ NL+DFTR+AYGTNY+ETL VQ+HANCR+RR+YF+DRLYSE+ELP EFKLYLP Q K
Subjt:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK

Q6PBJ2 Cilia- and flagella-associated protein 201.3e-3477.22Show/hide
Query:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK
        TR+KP+ICTMP+R+D+GWNQIQ NL+DFTR+AYGTNY+ETL VQ+HANCR+RR+YF+DRLYSE+ELP EFKLYLP Q K
Subjt:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVK

Q9VKV8 Cilia- and flagella-associated protein 203.5e-3580.52Show/hide
Query:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        TR+KP+ICTMP+R+DEGWNQIQ NL+DFTR+AYGTNYVETL VQ+HANCR+RR+YF+DRLYSE+ELPPEFKL+LP Q
Subjt:  TRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ

Arabidopsis top hitse value%identityAlignment
AT3G12300.1 unknown protein4.1e-3988.61Show/hide
Query:  AITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ
        A+TR+KPYICTMPL+MDEGWNQIQLNLAD TR+AYGTNY ETL VQ+HANCRLRRIYFADRLYSEEELPPEFKLYLP Q
Subjt:  AITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGAATGTCAGACGGCGCTTTCGAGCTTCTAACTTTCAAGTATGCTATCACTAGAATTAAGCCATATATCTGCACCATGCCTCTTAGGATGGACGAAGGT
TGGAACCAAATCCAGCTAAATCTGGCTGACTTTACAAGGAAAGCATATGGAACGAATTATGTCGAGACATTGCCAGTTCAGGTACATGCAAACTGCCGCTTGAGA
AGGATTTATTTTGCTGACCGCTTGTACTCGGAGGAGGAGCTTCCACCAGAGTTTAAGCTGTACCTCCCTACACAGGTGAAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TATGTTTAGATGTTTTGAAGCCAGTGCTTACGGTCTGTCAGATATGTTGCTTTTTAAATTCGTAGGACTCATGATTTCTTCTGTTATTTTATATTTATGTTCTTT
TTTGTAGGAGCAAACCTCTCCAGATATGGGATAAAGAAGTTTCTAATGGCCACATCAAACGCCCTCAGGATGAAGACATCCAATCAAACGTTATTGAAATTGTTG
GATAAAAAATTCAGTATACTTATATAACATGCCCAGCGGACCCAGCTTTTACCCTGGGTATAAAATTGCTGTTCTTAGCTATAATCTTGAAGAATCTCAAGAAAT
ATTTTACTTTTCAGATTCAAGTTTTGGATGATAAGAATGTCAGACGGCGCTTTCGAGCTTCTAACTTTCAAGTATGCTATCACTAGAATTAAGCCATATATCTGC
ACCATGCCTCTTAGGATGGACGAAGGTTGGAACCAAATCCAGCTAAATCTGGCTGACTTTACAAGGAAAGCATATGGAACGAATTATGTCGAGACATTGCCAGTT
CAGGTACATGCAAACTGCCGCTTGAGAAGGATTTATTTTGCTGACCGCTTGTACTCGGAGGAGGAGCTTCCACCAGAGTTTAAGCTGTACCTCCCTACACAGGTG
AAGTTTTAA
Protein sequenceShow/hide protein sequence
MIRMSDGAFELLTFKYAITRIKPYICTMPLRMDEGWNQIQLNLADFTRKAYGTNYVETLPVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPTQVKF