; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G096460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G096460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDUF4283 domain-containing protein
Genome locationCicolChr05:21733474..21734661
RNA-Seq ExpressionCcUC05G096460
SyntenyCcUC05G096460
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]9.2e-3340.3Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  KV+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]2.7e-3239.8Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  +V+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]7.8e-3237.78Show/hide
Query:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV
        D   + D  G +K   T  +   +    S+W S FG+     L YTLP  +GDK+VV P+ +V+++G++VWENS+V Q +DA LPY VIQRL+  I GK+
Subjt:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV

Query:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL
        EM  IT++EN                                               VPVWI L K+P+++W + GLA  A A+GK I+LD ATKER  L
Subjt:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL

Query:  TFARVCVEVSSDSVLPLSVVVRMRG
        ++ARVCVE+   S +P  + V +RG
Subjt:  TFARVCVEVSSDSVLPLSVVVRMRG

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]7.8e-3237.78Show/hide
Query:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV
        D   + D  G +K   T  +   +    S+W S FG+     L YTLP  +GDK+VV P+ +V+++G++VWENS+V Q +DA LPY VIQRL+  I GK+
Subjt:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV

Query:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL
        EM  IT++EN                                               VPVWI L K+P+++W + GLA  A A+GK I+LD ATKER  L
Subjt:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL

Query:  TFARVCVEVSSDSVLPLSVVVRMRG
        ++ARVCVE+   S +P  + V +RG
Subjt:  TFARVCVEVSSDSVLPLSVVVRMRG

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]2.7e-3239.8Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  +V+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013951.3e-3239.8Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  +V+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

A0A5A7TWG5 Reverse transcriptase domain-containing protein4.4e-3340.3Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  KV+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

A0A5A7V507 DUF4283 domain-containing protein3.8e-3237.78Show/hide
Query:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV
        D   + D  G +K   T  +   +    S+W S FG+     L YTLP  +GDK+VV P+ +V+++G++VWENS+V Q +DA LPY VIQRL+  I GK+
Subjt:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV

Query:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL
        EM  IT++EN                                               VPVWI L K+P+++W + GLA  A A+GK I+LD ATKER  L
Subjt:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL

Query:  TFARVCVEVSSDSVLPLSVVVRMRG
        ++ARVCVE+   S +P  + V +RG
Subjt:  TFARVCVEVSSDSVLPLSVVVRMRG

A0A5D3D5X6 Reverse transcriptase domain-containing protein1.3e-3239.8Show/hide
Query:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------
        +   S+W S FG+     L YTLP ++GDK+VV P  +V+++G+KVWENS+V Q +D+ LPY VIQ L+  I GK+EM  IT++EN              
Subjt:  LSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMEN--------------

Query:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR
                                         VPVWI+L K+P+++W + GLA  ASA+GK I+LD ATKER  L++ARVCVE+ + S +P  + V +R
Subjt:  ---------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMR

Query:  G
        G
Subjt:  G

A0A5D3DSG9 DUF4283 domain-containing protein3.8e-3237.78Show/hide
Query:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV
        D   + D  G +K   T  +   +    S+W S FG+     L YTLP  +GDK+VV P+ +V+++G++VWENS+V Q +DA LPY VIQRL+  I GK+
Subjt:  DGSEDADQVGPMKEAVTFADRGLSG--PSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKV

Query:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL
        EM  IT++EN                                               VPVWI L K+P+++W + GLA  A A+GK I+LD ATKER  L
Subjt:  EMSTITLMEN-----------------------------------------------VPVWIKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSL

Query:  TFARVCVEVSSDSVLPLSVVVRMRG
        ++ARVCVE+   S +P  + V +RG
Subjt:  TFARVCVEVSSDSVLPLSVVVRMRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGACGATGATGGTGAAGCGAAGATCTCCGATCCGAAACAAGGGTACGAGTGGTTTGGGTTTGAGGTCATGCGAAAATCCCCAAATTTCTTTTTTATTGTCCGAGG
GACGCAAATTGATGATCGATTCGATGGCTGCAATTGGCCGCGAGGAAGAAGCTATATGAAACCGTTTGAATCGTGGATTGAACCGATGGGTCATGAAGATGGACAGAAGG
GTTGTGGGCTGGAGGACCATGGTCAATGGGCCATGGCAGGTTGGATGCCTTGGCTGAGTACTGATGAAGTTTGGCTGATGAAATTTGGTGGGCTGGGCTCACTTGATGGG
TCAGAGGATGCTGATCAAGTTGGGCCAATGAAAGAAGCAGTGACGTTTGCAGACAGGGGTTTGAGTGGGCCTTCCTCTTGGATTTCTTTTTTCGGATCTCCAAAAACAGT
GGAGTTAGCCTACACTCTTCCAATGATGGTGGGAGACAAAGTGGTGGTTGAACCATCGTATAAGGTGTTGGAGGAAGGCGTCAAAGTTTGGGAAAATTCGATTGTCGTGC
AATTTGTTGATGCCTCTCTACCGTATGTTGTCATCCAACGCTTGATAACCCATATTTCGGGAAAGGTGGAAATGTCGACTATCACGTTGATGGAGAATGTTCCTGTGTGG
ATTAAATTATCTAAGATTCCTATAAAGATATGGTTTGATCGGGGGTTAGCTGCAAGAGCAAGTGCGATGGGTAAACTTATTGCCCTTGATACAGCAACGAAGGAGAGGCA
CAGCTTGACGTTTGCGAGAGTCTGTGTGGAGGTCTCAAGTGACTCTGTGTTGCCCTTGTCTGTTGTGGTTAGAATGAGAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGACGATGATGGTGAAGCGAAGATCTCCGATCCGAAACAAGGGTACGAGTGGTTTGGGTTTGAGGTCATGCGAAAATCCCCAAATTTCTTTTTTATTGTCCGAGG
GACGCAAATTGATGATCGATTCGATGGCTGCAATTGGCCGCGAGGAAGAAGCTATATGAAACCGTTTGAATCGTGGATTGAACCGATGGGTCATGAAGATGGACAGAAGG
GTTGTGGGCTGGAGGACCATGGTCAATGGGCCATGGCAGGTTGGATGCCTTGGCTGAGTACTGATGAAGTTTGGCTGATGAAATTTGGTGGGCTGGGCTCACTTGATGGG
TCAGAGGATGCTGATCAAGTTGGGCCAATGAAAGAAGCAGTGACGTTTGCAGACAGGGGTTTGAGTGGGCCTTCCTCTTGGATTTCTTTTTTCGGATCTCCAAAAACAGT
GGAGTTAGCCTACACTCTTCCAATGATGGTGGGAGACAAAGTGGTGGTTGAACCATCGTATAAGGTGTTGGAGGAAGGCGTCAAAGTTTGGGAAAATTCGATTGTCGTGC
AATTTGTTGATGCCTCTCTACCGTATGTTGTCATCCAACGCTTGATAACCCATATTTCGGGAAAGGTGGAAATGTCGACTATCACGTTGATGGAGAATGTTCCTGTGTGG
ATTAAATTATCTAAGATTCCTATAAAGATATGGTTTGATCGGGGGTTAGCTGCAAGAGCAAGTGCGATGGGTAAACTTATTGCCCTTGATACAGCAACGAAGGAGAGGCA
CAGCTTGACGTTTGCGAGAGTCTGTGTGGAGGTCTCAAGTGACTCTGTGTTGCCCTTGTCTGTTGTGGTTAGAATGAGAGGGTAA
Protein sequenceShow/hide protein sequence
MLDDDGEAKISDPKQGYEWFGFEVMRKSPNFFFIVRGTQIDDRFDGCNWPRGRSYMKPFESWIEPMGHEDGQKGCGLEDHGQWAMAGWMPWLSTDEVWLMKFGGLGSLDG
SEDADQVGPMKEAVTFADRGLSGPSSWISFFGSPKTVELAYTLPMMVGDKVVVEPSYKVLEEGVKVWENSIVVQFVDASLPYVVIQRLITHISGKVEMSTITLMENVPVW
IKLSKIPIKIWFDRGLAARASAMGKLIALDTATKERHSLTFARVCVEVSSDSVLPLSVVVRMRG