; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G096880 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G096880
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionBasic helix-loop-helix transcription factor
Genome locationCicolChr05:23650913..23653861
RNA-Seq ExpressionCcUC05G096880
SyntenyCcUC05G096880
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044818 - Transcription factor ILR3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151959.3 LOW QUALITY PROTEIN: transcription factor ILR3 [Cucumis sativus]3.6e-11385.94Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPV SSSFSW  QPFNG HD+GVEI+GSLADLD RLESGSKKRVRSDSC+ASSSKACREKLR DRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKS+PAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG A GNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

XP_004151962.3 transcription factor ILR3 [Cucumis sativus]6.6e-11585.94Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW  QPFNG HD+GVEI+GSLADLD  LESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLR ET+KLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG APGNKL PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

XP_008454558.1 PREDICTED: transcription factor ILR3 isoform X1 [Cucumis melo]5.6e-11485.94Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSF+WA QPFNG HDTGVEI+GSLAD+D RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSET KLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFL PPIPTF AQG APGNKL PF+GYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

XP_008454561.1 PREDICTED: transcription factor ILR3-like [Cucumis melo]2.1e-11687.11Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSWA Q FNG HDTGVEI+GSLADLD RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG APGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

XP_038900262.1 transcription factor ILR3-like [Benincasa hispida]6.6e-11586.72Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSW+ QPFNG  D GVEI+GSLADLD RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLEL S
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTFAAQ  APG+KLVPFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N8 BHLH domain-containing protein4.9e-11686.72Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSW  QPFNG HD+GVEI+GSLADLD  LESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG APGNKL PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

A0A1S3BYW4 transcription factor ILR3-like9.9e-11787.11Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSWA Q FNG HDTGVEI+GSLADLD RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG APGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

A0A1S3C042 transcription factor ILR3 isoform X12.7e-11485.94Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSF+WA QPFNG HDTGVEI+GSLAD+D RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSET KLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFL PPIPTF AQG APGNKL PF+GYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

A0A5A7TUD2 Transcription factor ILR3 isoform X12.7e-11485.94Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSF+WA QPFNG HDTGVEI+GSLAD+D RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSET KLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFL PPIPTF AQG APGNKL PF+GYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

A0A5D3BHU4 Transcription factor ILR3-like9.9e-11787.11Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPENPNWLFDYGLI+DIPVPD NFPVTSSSFSWA Q FNG HDTGVEI+GSLADLD RLESGSKKRVRSDSC+ASSSKACREKLRRDRLNDKFLELGS
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ
        ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELK                     AEKNELRDEKQRLKADKERLEQQVKSMPAQQ
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQ

Query:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        PGFLPPPIPTF AQG APGNKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Subjt:  PGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

SwissProt top hitse value%identityAlignment
Q8L467 Transcription factor bHLH1044.1e-3545.89Show/hide
Query:  GSLADLDDRLESG-SKKRVRSDSCN-ASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKA
        G++ +  + L+   S+KR R+ SC+    +KACRE+LRR++LN++F++L S+L+PGR PKTDK AIL DA+R++NQLR E  KL+E+N  L E+IK LK 
Subjt:  GSLADLDDRLESG-SKKRVRSDSCN-ASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKA

Query:  SLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH
                            AEKNELR+EK  LKADKE+ EQQ+KSM A   GF+P     F     A    + P  GY P   MW +MP +  DTS+D 
Subjt:  SLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH

Query:  VLRPPVA
         LRPP A
Subjt:  VLRPPVA

Q9C682 Transcription factor bHLH1153.2e-6455.98Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPEN NWL DY LI      +  F   + +F W     +G     VE++G L D D   E  S+KR++++SC  S+SKACREK RRDRLNDKF EL S
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMP
        +L+PGR PKTDK AI+ DA+RMVNQ R E QKLK+ NSSLQEKIKELK                      EKNELRDEKQ+LK +KER++QQ   +K+ P
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMP

Query:  AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
          QP FLP   P   +Q  APG+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

Q9FH37 Transcription factor ILR38.8e-7059.77Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSW-ATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELG
        MVSPEN NW+ D  LID       +F +    FSW   QP     ++   ++GS  + +   E GSKKR R +S +A+SSKACREK RRDRLNDKF+ELG
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSW-ATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELG

Query:  SILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQ
        +IL+PG PPKTDKAAILVDAVRMV QLR E QKLK+SNSSLQ+KIKELK                      EKNELRDEKQRLK +KE+LEQQ+K+M A 
Subjt:  SILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQ

Query:  QPGFLPPP--IPT--FAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        QP F P P  +PT   +AQG APGNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPVA
Subjt:  QPGFLPPP--IPT--FAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

Q9LT23 Transcription factor bHLH1211.4e-1434.31Show/hide
Query:  SSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRD
        S KA REKLRR++LN+ F+ELG++LDP R PK DKA IL D V+++ +L SE  KLK   ++L ++ +EL                     + EKN+LR+
Subjt:  SSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRD

Query:  EKQRLKADKERL----EQQVKSMP------------AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYH----------PSVAMWQFMPPAAVDTSQD-HV
        EK  LK+D E L    +Q+++SM             A  P F P P+P     G  P +  +P   Y           P      +MPP  V   Q  H+
Subjt:  EKQRLKADKERL----EQQVKSMP------------AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYH----------PSVAMWQFMPPAAVDTSQD-HV

Query:  LRPP
         + P
Subjt:  LRPP

Q9LTC7 Transcription factor bHLH349.8e-3746.4Show/hide
Query:  QPFNGIHDTGVEIEGSL---ADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLK
        Q F+G+    VEI  S    A  ++  E  S KR R+ SC+   +KACREKLRR++LNDKF++L S+L+PGR PKTDK+AIL DA+R+VNQLR E  +L+
Subjt:  QPFNGIHDTGVEIEGSL---ADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLK

Query:  ESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAM
        E+N  L E+IK LK                     A+KNELR+EK  LKA+KE++EQQ+KSM    PGF+P   P  AA          P+  Y P++ M
Subjt:  ESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAM

Query:  WQFMPPAAVDTSQDHVLRPPVA
        W  +PPA  DTS+D    PPVA
Subjt:  WQFMPPAAVDTSQDHVLRPPVA

Arabidopsis top hitse value%identityAlignment
AT1G51070.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.3e-6555.98Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS
        MVSPEN NWL DY LI      +  F   + +F W     +G     VE++G L D D   E  S+KR++++SC  S+SKACREK RRDRLNDKF EL S
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGS

Query:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMP
        +L+PGR PKTDK AI+ DA+RMVNQ R E QKLK+ NSSLQEKIKELK                      EKNELRDEKQ+LK +KER++QQ   +K+ P
Subjt:  ILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMP

Query:  AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
          QP FLP   P   +Q  APG+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Subjt:  AQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

AT1G51070.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.5e-5946.84Show/hide
Query:  MVSPENPNWLFDYGLI-----DDIPV----PDANFPVTSSSFSWAT-----------------QPFNGIHDT----------------------------
        MVSPEN NWL DY LI     D  P      D +  V   S+ W +                 +    +H +                            
Subjt:  MVSPENPNWLFDYGLI-----DDIPV----PDANFPVTSSSFSWAT-----------------QPFNGIHDT----------------------------

Query:  ---GVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEK
            VE++G L D D   E  S+KR++++SC  S+SKACREK RRDRLNDKF EL S+L+PGR PKTDK AI+ DA+RMVNQ R E QKLK+ NSSLQEK
Subjt:  ---GVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEK

Query:  IKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPP
        IKELK                      EKNELRDEKQ+LK +KER++QQ   +K+ P  QP FLP   P   +Q  APG+KLVPF  Y P  AMWQFMPP
Subjt:  IKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQ---VKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPP

Query:  AAVDTSQDHVLRPPVA
        AAVDTSQDHVLRPPVA
Subjt:  AAVDTSQDHVLRPPVA

AT3G23210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.0e-3846.4Show/hide
Query:  QPFNGIHDTGVEIEGSL---ADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLK
        Q F+G+    VEI  S    A  ++  E  S KR R+ SC+   +KACREKLRR++LNDKF++L S+L+PGR PKTDK+AIL DA+R+VNQLR E  +L+
Subjt:  QPFNGIHDTGVEIEGSL---ADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLK

Query:  ESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAM
        E+N  L E+IK LK                     A+KNELR+EK  LKA+KE++EQQ+KSM    PGF+P   P  AA          P+  Y P++ M
Subjt:  ESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAM

Query:  WQFMPPAAVDTSQDHVLRPPVA
        W  +PPA  DTS+D    PPVA
Subjt:  WQFMPPAAVDTSQDHVLRPPVA

AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.9e-3645.89Show/hide
Query:  GSLADLDDRLESG-SKKRVRSDSCN-ASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKA
        G++ +  + L+   S+KR R+ SC+    +KACRE+LRR++LN++F++L S+L+PGR PKTDK AIL DA+R++NQLR E  KL+E+N  L E+IK LK 
Subjt:  GSLADLDDRLESG-SKKRVRSDSCN-ASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKA

Query:  SLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH
                            AEKNELR+EK  LKADKE+ EQQ+KSM A   GF+P     F     A    + P  GY P   MW +MP +  DTS+D 
Subjt:  SLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDH

Query:  VLRPPVA
         LRPP A
Subjt:  VLRPPVA

AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-7159.77Show/hide
Query:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSW-ATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELG
        MVSPEN NW+ D  LID       +F +    FSW   QP     ++   ++GS  + +   E GSKKR R +S +A+SSKACREK RRDRLNDKF+ELG
Subjt:  MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSW-ATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELG

Query:  SILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQ
        +IL+PG PPKTDKAAILVDAVRMV QLR E QKLK+SNSSLQ+KIKELK                      EKNELRDEKQRLK +KE+LEQQ+K+M A 
Subjt:  SILDPGRPPKTDKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQ

Query:  QPGFLPPP--IPT--FAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
        QP F P P  +PT   +AQG APGNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPVA
Subjt:  QPGFLPPP--IPT--FAAQGPAPGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCGGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGGCTAC
TCAGCCCTTTAACGGCATCCATGATACCGGTGTGGAAATTGAGGGATCATTGGCAGATCTAGATGACCGTCTAGAATCTGGCTCAAAAAAGAGGGTCAGATCTGATTCAT
GTAATGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTTTCTGGAACTGGGCTCCATTTTGGACCCTGGAAGACCGCCCAAAACT
GACAAGGCTGCAATTTTAGTTGACGCGGTTCGAATGGTGAATCAGTTGCGTAGCGAAACCCAGAAACTAAAGGAATCAAATTCAAGTCTCCAGGAGAAGATTAAAGAGTT
GAAGGCAAGCCTCCTTGGATTTCTTTCCCAACTATACAATGTGCCAATTTATAAGATCGTCCATTCAGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTCAAGG
CAGATAAGGAGAGGCTAGAGCAGCAAGTGAAGTCCATGCCTGCTCAACAACCGGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGGGTCCAGCTCCTGGCAAT
AAGTTAGTTCCTTTCATTGGTTACCACCCGAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCAGTGGACACGTCACAGGACCATGTACTCCGGCCACCCGTCGCATA
A
mRNA sequenceShow/hide mRNA sequence
AATGGGGGTTTCAAAGACCATAACCAAAAAATGCGTACGCGTTTGGATGACGTGTTTCTCCCACTCGATCACAAATATGGGCAATCCTCTACAAATTTTTATGGTCCCCT
AAATATTCATCTCCTCCTATTTTCTCTCTCTTCAATCGCCCCAGCCCTAACCCTAACTCTCCTCCTCTAATTTCTCTTCAATTATCGTTCCGTGTTTCTTCCCATTATTC
TGGCCGGAAATTTTGAATATTTTCCGGCGATCCCACGGTTTTTTTCTTTTTTCTTTTTTTTTTTTTTCAATAATTGTTTGAGAAATGGTATCCCCCGAAAATCCCAATTG
GTTGTTTGATTATGGTTTGATCGACGACATCCCTGTACCGGATGCGAATTTCCCGGTCACGAGTTCAAGCTTCTCCTGGGCTACTCAGCCCTTTAACGGCATCCATGATA
CCGGTGTGGAAATTGAGGGATCATTGGCAGATCTAGATGACCGTCTAGAATCTGGCTCAAAAAAGAGGGTCAGATCTGATTCATGTAATGCATCAAGCTCCAAAGCATGT
AGGGAGAAATTGCGGAGGGATAGGCTCAATGACAAGTTTCTGGAACTGGGCTCCATTTTGGACCCTGGAAGACCGCCCAAAACTGACAAGGCTGCAATTTTAGTTGACGC
GGTTCGAATGGTGAATCAGTTGCGTAGCGAAACCCAGAAACTAAAGGAATCAAATTCAAGTCTCCAGGAGAAGATTAAAGAGTTGAAGGCAAGCCTCCTTGGATTTCTTT
CCCAACTATACAATGTGCCAATTTATAAGATCGTCCATTCAGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTCAAGGCAGATAAGGAGAGGCTAGAGCAGCAA
GTGAAGTCCATGCCTGCTCAACAACCGGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGGGTCCAGCTCCTGGCAATAAGTTAGTTCCTTTCATTGGTTACCA
CCCGAGTGTTGCCATGTGGCAGTTCATGCCACCTGCTGCAGTGGACACGTCACAGGACCATGTACTCCGGCCACCCGTCGCATAACTTGGTGGCAACTAAGGTTGCCAGA
AAGAAACCATTGGCAGCAACTGATTGCTTGGGATTTTGGCCCGGACCTTCATTTTTATTCTGCCATTGTCAACCAATATATTAGTATTGTTAAGTTAGTAGGCTCGCTTT
TCAATCGATTTTGGGGTTGTCTGTCTTATTTGTCATTGGATACTTGAAAGAACCCGCGCTGTTTTGGGTTTTGTAATTGTAAATGTGAATAAGTGAGTGATTTGGTAATG
ACCTCTCTATTTCGTAGTGAATGGTGAAGTTGGGAACGACATTTCCACTCATCTTTAACCTTTCGATTATCTGAAGGGGC
Protein sequenceShow/hide protein sequence
MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWATQPFNGIHDTGVEIEGSLADLDDRLESGSKKRVRSDSCNASSSKACREKLRRDRLNDKFLELGSILDPGRPPKT
DKAAILVDAVRMVNQLRSETQKLKESNSSLQEKIKELKASLLGFLSQLYNVPIYKIVHSAEKNELRDEKQRLKADKERLEQQVKSMPAQQPGFLPPPIPTFAAQGPAPGN
KLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA