CuGenDBv2

Gene ID	CcUC05G097960
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein FAM33A
Genome location	CicolChr05:26245268..26253775
RNA-Seq Expression	CcUC05G097960
Synteny	CcUC05G097960
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

9.1e-75

93.55

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ
        MG PFVSD DDPAF QFKQITEEWTTQVQSK GEDGQEDA+C DVNKLLFSAVVQ
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ

XP_008452819.1 PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]

1.4e-72

91.08

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Query:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA

Query:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA
        SMG+PFVSDLDDPA A+FKQITEEWTTQVQSKFGED QEDADC +VNKLLFSAVVQA
Subjt:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

3.8e-73

92.21

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVV
        MG+P VSDLDD AFAQFK+ITEEWTTQVQSK G+DGQEDAD +DVNKLLFSAVV
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVV

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]

1.3e-73

92.9

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ
        MG PFVSD DDPAF QFKQITEEWTTQVQSK GEDGQEDA+  DVNKLLFSAVVQ
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

1.7e-76

95.51

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        M LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQK+QAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA
        MGVPFVSDLDDPAFA+FKQITEEWT QVQSKFGEDGQEDAD +DVNKLLFSAVVQA
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BUQ8 Protein FAM33A

7.0e-73

91.08

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Query:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA

Query:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA
        SMG+PFVSDLDDPA A+FKQITEEWTTQVQSKFGED QEDADC +VNKLLFSAVVQA
Subjt:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA

A0A5A7VFB8 Protein FAM33A

7.0e-73

91.08

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Query:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQA

Query:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA
        SMG+PFVSDLDDPA A+FKQITEEWTTQVQSKFGED QEDADC +VNKLLFSAVVQA
Subjt:  SMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA

A0A6J1CJF1 Protein FAM33A

1.8e-73

92.21

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQKMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVV
        MG+P VSDLDD AFAQFK+ITEEWTTQVQSK G+DGQEDAD +DVNKLLFSAVV
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

6.3e-74

92.9

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ
        MG PFVSD DDPAF QFKQITEEWTTQVQSK GEDGQEDA+  DVNKLLFSAVVQ
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ

A0A6J1IP41 Protein FAM33A

2.7e-72

91.61

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRDDISTLKEQCR+VLMAKQDVIDKARTVLVGNRNML+KMQAS
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQAS

Query:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ
        MG PFVSD DDPAF QFKQITEEWTTQVQSK GEDGQEDA+  DVNKLLFSAVVQ
Subjt:  MGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQ

SwissProt top hits

e value

%identity

Alignment

Q2TBY0 Spindle and kinetochore-associated protein 2

1.8e-04

33.33

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Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM--LQKMQ
        D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L+  +  I+    TL  + + + + +++   K+R     N+ M  +Q++Q
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNM--LQKMQ

Q4R8E8 Spindle and kinetochore-associated protein 2

1.0e-04

30.68

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Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQ
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  ++    TL  + + V + +++   +    +    N++QK+Q
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQ

Q8WVK7 Spindle and kinetochore-associated protein 2

3.5e-05

32.95

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Query:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQ
        D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  I+    TL  + + V + +++   +    +    NM+QK+Q
Subjt:  DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

3.7e-42

57.24

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Query:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMG
        + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D++ LK QC ++L AKQD+IDKA+T LVGN N++QKM AS+G
Subjt:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMG

Query:  VPFVSDLDDPAFAQFKQITEEWTTQVQSK-FGEDGQEDADCDDVNKLLFSAV
             D DD A A F QI +EWT QV+S+  GE   EDAD +D+NK+LFSA+
Subjt:  VPFVSDLDDPAFAQFKQITEEWTTQVQSK-FGEDGQEDADCDDVNKLLFSAV

Sequences

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CDS sequence

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ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGA
GTTTCAGCAAATTTATCCCGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACTTTGAAAGAGCAGTGTCGTGAAGTTTTGA
TGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGAT
GATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAA
GCTGCTATTCTCGGCGGTAGTGCAGGCATGA

mRNA sequence

Show/hide mRNA sequence

AAGGAGGTTCAAACTAAGAGAGCGCGAAAACCCTAGCAGAGAGAGAGAATATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTC
ACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAA
AATACGAGATGATATATCAACTTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGC
TGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCA
AAATTTGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGCTGCTATTCTCGGCGGTAGTGCAGGCATGATTGGTAAAAGTTTCGATACCAAAATTAAG
TTCCAACTATGCGGGTATCTCTCTATCAAATTCATTATATCTCCCTTCCCTCTGCTAAAATCCCAATTATCTACTTTATCAATATTGACAAATTTTTGAAAAAATTATTA
GGAAGAAAACTTGTAAATATAATTTAAAATCAATAAATAAGCATTTAGGGAGTATTTGGCCCTCTAACTTGAAGTTGGTGAATTGAGCTATTATAGCCTACTGGATGTTT
GGGACTCCAAATATAATAGTGATAGAATTATCTAGAGTTATACTATCTGAAAAATCCTTATCGTGTT

Protein sequence

Show/hide protein sequence

MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLD
DPAFAQFKQITEEWTTQVQSKFGEDGQEDADCDDVNKLLFSAVVQA

CcUC05G097960 (gene) of Watermelon (PI 537277) v1 genome