; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G100240 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G100240
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionGibberellin regulated protein
Genome locationCicolChr05:28565120..28571454
RNA-Seq ExpressionCcUC05G100240
SyntenyCcUC05G100240
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3476318.1 gibberellin-regulated protein 11-like [Gossypium australe]2.7e-4540.57Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI K   IA L IS LL+   A D   + ++     T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK----------------------------------------------------------------------STKGL---------------------
        GRRK                                                                      S  G+                     
Subjt:  GRRK----------------------------------------------------------------------STKGL---------------------

Query:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY
                             + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNY
Subjt:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY

Query:  DVCPCYANMTTHGGRHKC
        DVCPCY +MTTHGG+HKC
Subjt:  DVCPCYANMTTHGGRHKC

KAG8492134.1 hypothetical protein CXB51_015749 [Gossypium anomalum]1.7e-4742.05Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI K   IA L IS LL+   A D   + ++     T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRKSTKGL-------------------------------------------------------------------------------------------
        GRRK+ + +                                                                                           
Subjt:  GRRKSTKGL-------------------------------------------------------------------------------------------

Query:  -----VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH
             + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNYDVCPCY +MTTHGG+H
Subjt:  -----VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH

Query:  KC
        KC
Subjt:  KC

KAG8494278.1 hypothetical protein CXB51_011657 [Gossypium anomalum]3.8e-5552.61Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI    LIA L IS LL      D   + ++  G  T+P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRKS--------------------------TKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPL--PQEIDCGEACDARCRLSSRPKVCKRACGTCCGR
        G+RK                            K L+ ++LL  F +     S  +VI   V+      ++IDCG AC  RC+LSSRP +CKRACGTCC R
Subjt:  GRRKS--------------------------TKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPL--PQEIDCGEACDARCRLSSRPKVCKRACGTCCGR

Query:  CQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        C CVPPGT  NYDVCPCY +MTTHGGRHKC
Subjt:  CQCVPPGTSGNYDVCPCYANMTTHGGRHKC

RYR00948.1 hypothetical protein Ahy_B06g079823 [Arachis hypogaea]4.1e-4950.23Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K LL+A L ++SLL++      ++      G       +Q IDC GACA+RC+LSSRPNLC+RACGTCC RC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC
        GRRK             +    + A +LI+  +L ++ES                IDC   C  RC LSSRP +C+RACGTCC RC CVP GTSG+Y+ C
Subjt:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC

Query:  PCYANMTTHGGRHKC
        PCYAN TTHGG HKC
Subjt:  PCYANMTTHGGRHKC

XP_008466485.1 PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo]2.7e-4591.84Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +TKGLVF MLLIAFAM LLMESGQM+ITTQVDNPLPQEIDCG+ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

TrEMBL top hitse value%identityAlignment
A0A1S3CRE3 gibberellin-regulated protein 1-like1.3e-4591.84Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +TKGLVF MLLIAFAM LLMESGQM+ITTQVDNPLPQEIDCG+ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

A0A444YG93 Uncharacterized protein2.0e-4950.23Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K LL+A L ++SLL++      ++      G       +Q IDC GACA+RC+LSSRPNLC+RACGTCC RC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC
        GRRK             +    + A +LI+  +L ++ES                IDC   C  RC LSSRP +C+RACGTCC RC CVP GTSG+Y+ C
Subjt:  GRRK-------------STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVC

Query:  PCYANMTTHGGRHKC
        PCYAN TTHGG HKC
Subjt:  PCYANMTTHGGRHKC

A0A5A7V5C1 Gibberellin-regulated protein 1-like1.3e-4591.84Show/hide
Query:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +TKGLVF MLLIAFAM LLMESGQM+ITTQVDNPLPQEIDCG+ACDARCRLSSR K+CKRACGTCC RCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
Subjt:  STKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

A0A5B6W509 Gibberellin-regulated protein 11-like1.3e-4540.57Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MAI K   IA L IS LL+   A D   + ++     T P K   IDCGGACA+RC+LSSRP+LCKRACGTCCARC+CVPPGT+G  E CPCYA++TTHG
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRK----------------------------------------------------------------------STKGL---------------------
        GRRK                                                                      S  G+                     
Subjt:  GRRK----------------------------------------------------------------------STKGL---------------------

Query:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY
                             + A LLI+  +LL  +ES    MVIT  V+     + IDC EAC  RC+LSSRP +CKRACGTCC RC CVPPGTSGNY
Subjt:  ---------------------VFAMLLIAFAMLL-LMESGQ--MVITTQVDNPLPQE-IDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNY

Query:  DVCPCYANMTTHGGRHKC
        DVCPCY +MTTHGG+HKC
Subjt:  DVCPCYANMTTHGGRHKC

A0A803QWJ7 Uncharacterized protein5.7e-4951.49Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG
        MA+ K L+I+ LF   +L +  A+DT     ++  VA   +K ++IDCGG+CA+RC+LSSRP LCKRACGTCC RC+CVPPGT+G  E        +T  
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHG

Query:  GRRKSTKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH
                                        + + +PLPQ+IDC  ACDARC  SSRP++CKRACGTCC RC CVPPGTSGNYD CPCYANMTTHGGRH
Subjt:  GRRKSTKGLVFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRH

Query:  KC
        KC
Subjt:  KC

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 117.5e-2259.18Show/hide
Query:  LLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +L+A L I SLLVL F      MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRK
Subjt:  LLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

P46687 Gibberellin-regulated protein 37.8e-1964.52Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR K
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

P46688 Gibberellin-regulated protein 22.7e-1967.21Show/hide
Query:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +IDCG  C  RC  SSR K+C RAC +CC RC CVPPGTSGN  +CPCYA++TTHGGR KC
Subjt:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

P46689 Gibberellin-regulated protein 17.3e-2559.14Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++   V  +Q  N   ++IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

Q93X17 Snakin-21.9e-2556.88Show/hide
Query:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPV-----KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN
        MAI K      LF S LL L   E    +    D V +N +       + IDCGGACA+RC+LSSRP LC RACGTCCARC+CVPPGTSG  ETCPCYA+
Subjt:  MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPV-----KIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAN

Query:  MTTHGGRRK
        +TTHG +RK
Subjt:  MTTHGGRRK

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 15.2e-2659.14Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++   V  +Q  N   ++IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

AT1G75750.2 GAST1 protein homolog 14.0e-2658.06Show/hide
Query:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        + A LLI+  +L L+++ +    +Q  N   ++IDCG AC ARCRLS RP++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KC
Subjt:  VFAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC

AT2G18420.1 Gibberellin-regulated family protein5.3e-2359.18Show/hide
Query:  LLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +L+A L I SLLVL F      MV S D           IDC   C  RC LSSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY ++TTHGGRRK
Subjt:  LLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

AT4G09600.1 GAST1 protein homolog 35.5e-2064.52Show/hide
Query:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK
        +  IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA++TT GGR K
Subjt:  IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRK

AT4G09610.1 GAST1 protein homolog 21.9e-2067.21Show/hide
Query:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC
        +IDCG  C  RC  SSR K+C RAC +CC RC CVPPGTSGN  +CPCYA++TTHGGR KC
Subjt:  EIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCCTAAACCTCTACTTATCGCTTGTCTTTTCATCTCATCCCTTCTCGTTCTTTGTTTTGCCGAAGATACAAATAAGATGGTAAACTCAATGGATGGTGTTGC
GACTAATCCTGTTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGTCAAGGTGCAAATTATCGTCAAGGCCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGTG
CACGTTGCAGCTGCGTGCCTCCGGGCACTTCTGGCGGCTATGAAACCTGCCCTTGCTATGCCAACATGACCACTCACGGCGGCCGGAGAAAGTCGACTAAAGGTCTTGTG
TTTGCTATGCTTCTCATTGCTTTTGCTATGCTGCTCCTTATGGAATCAGGCCAAATGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCAGGAGATAGATTGTGGGGA
GGCTTGTGATGCGAGGTGCCGATTATCGTCGAGGCCGAAGGTCTGCAAGAGGGCATGTGGAACCTGTTGTGGTCGCTGTCAATGTGTTCCACCAGGCACTTCAGGCAACT
ACGATGTTTGTCCCTGCTATGCCAATATGACCACACATGGTGGCAGGCACAAATGTTCTGAAATGTTCAAAAACTATGCAAGGGAGATGCAGGGGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATTCATTCTACGTCCCCCAAACACTCCTGACTTCTAACTTCTCTCTCCATCTTCAATCCCATGGCCATTCCTAAACCTCTACTTATCGCTTGTCTTTTCATCTCATCCCT
TCTCGTTCTTTGTTTTGCCGAAGATACAAATAAGATGGTAAACTCAATGGATGGTGTTGCGACTAATCCTGTTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCGT
CAAGGTGCAAATTATCGTCAAGGCCGAACCTATGCAAGAGGGCATGCGGCACGTGCTGTGCACGTTGCAGCTGCGTGCCTCCGGGCACTTCTGGCGGCTATGAAACCTGC
CCTTGCTATGCCAACATGACCACTCACGGCGGCCGGAGAAAGTCGACTAAAGGTCTTGTGTTTGCTATGCTTCTCATTGCTTTTGCTATGCTGCTCCTTATGGAATCAGG
CCAAATGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCAGGAGATAGATTGTGGGGAGGCTTGTGATGCGAGGTGCCGATTATCGTCGAGGCCGAAGGTCTGCAAGA
GGGCATGTGGAACCTGTTGTGGTCGCTGTCAATGTGTTCCACCAGGCACTTCAGGCAACTACGATGTTTGTCCCTGCTATGCCAATATGACCACACATGGTGGCAGGCAC
AAATGTTCTGAAATGTTCAAAAACTATGCAAGGGAGATGCAGGGGACTTAA
Protein sequenceShow/hide protein sequence
MAIPKPLLIACLFISSLLVLCFAEDTNKMVNSMDGVATNPVKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYANMTTHGGRRKSTKGLV
FAMLLIAFAMLLLMESGQMVITTQVDNPLPQEIDCGEACDARCRLSSRPKVCKRACGTCCGRCQCVPPGTSGNYDVCPCYANMTTHGGRHKCSEMFKNYAREMQGT