; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G100310 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G100310
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationCicolChr05:28625753..28629581
RNA-Seq ExpressionCcUC05G100310
SyntenyCcUC05G100310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8494276.1 hypothetical protein CXB51_011624 [Gossypium anomalum]2.5e-0748.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

MBA0565790.1 hypothetical protein [Gossypium lobatum]1.4e-0748.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R+E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

TKY57641.1 L10-interacting MYB domain-containing protein [Spatholobus suberectus]3.8e-0850.63Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR     +                         I AQ R E +KV+DCPIYEQLCTIFI+SAA GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

XP_018820454.1 L10-interacting MYB domain-containing protein-like isoform X1 [Juglans regia]1.9e-0751.9Show/hide
Query:  NNNQLRKHLDVLR-----VTSPLM--------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR     + S L                     I AQ R E+I+V+DCPIYEQLC IFI+SAA GKYA
Subjt:  NNNQLRKHLDVLR-----VTSPLM--------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

XP_038717192.1 uncharacterized protein LOC120010466 [Tripterygium wilfordii]1.9e-0748.72Show/hide
Query:  NNNQLRKHLDVLRVTSPLM------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR     +                        I AQ RSE IKV+DCPIY+QLCTIF +++A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

TrEMBL top hitse value%identityAlignment
A0A0B0MC62 L10-interacting MYB domain-containing protein-like1.2e-0748.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

A0A1U8PGU4 L10-interacting MYB domain-containing protein-like1.2e-0748.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

A0A2I4EM27 L10-interacting MYB domain-containing protein-like isoform X19.2e-0851.9Show/hide
Query:  NNNQLRKHLDVLR-----VTSPLM--------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR     + S L                     I AQ R E+I+V+DCPIYEQLC IFI+SAA GKYA
Subjt:  NNNQLRKHLDVLR-----VTSPLM--------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

A0A5D2GJB1 Myb_DNA-bind_3 domain-containing protein1.2e-0748.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

A0A7J8MMK0 Myb_DNA-bind_3 domain-containing protein7.0e-0848.1Show/hide
Query:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA
        NNNQLRKHLDVLR+    +                         I AQ R+E IK++DCPIYEQLCTIF +S+A GKYA
Subjt:  NNNQLRKHLDVLRVTSPLM-------------------------IRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAGGGCAAATTGTACAACATCTCTGGTCAAGATATTTGCAGATCTGGTTGTCAGGCACATTCAGCAGAGATAGACAAAACAATGTGTTGGATAAGAAAACATGA
AATCACATTTGCGATGAAATCAATAAGCAAACTGATCTCAACTTCCAATAACAATCAGTTGAGGAAGCATTTGGATGTCTTGAGAGTGACCTCACCATTGATGATTCGTG
CCCAGCATCGATCTGAGGTGATCAAAGTTGAGGACTGTCCCATATATGAGCAGCTGTGCACAATATTCATAGAATCAGCTGCTGGTGGGAAGTATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAGGGCAAATTGTACAACATCTCTGGTCAAGATATTTGCAGATCTGGTTGTCAGGCACATTCAGCAGAGATAGACAAAACAATGTGTTGGATAAGAAAACATGA
AATCACATTTGCGATGAAATCAATAAGCAAACTGATCTCAACTTCCAATAACAATCAGTTGAGGAAGCATTTGGATGTCTTGAGAGTGACCTCACCATTGATGATTCGTG
CCCAGCATCGATCTGAGGTGATCAAAGTTGAGGACTGTCCCATATATGAGCAGCTGTGCACAATATTCATAGAATCAGCTGCTGGTGGGAAGTATGCATGATCCAGCCAC
TACAAACAGCTGGACAAACCTGCTGGAACGAATAGATTAGTCATCAGTTCATGTCCTGAACCATGTCTCCTGAAAACCTGTTAACCAAAACTAAGTGGGGGAATCTGTTA
TCTTCTGGAAAAGGGATAAAGGCTGTGGTAGAGAGAAAGAAAAAGCGACAATTAGATGCACATCCTTCCATAGGTCAAAGCAGCACAGAACAAGAAACCCAGCTGATAAT
GGCATAAGCCTTGTTATTAGAAGCTTCCAAAGTGAGAACAGCTGAAAGAATGCCTACTGAAGACAGATTCAGTAAACTAATTCAATAGGTGCGCTGGACGAGATTGAAAG
CATTGATTACTGGCTGTATTTTGCTGTTTCGGATCTCTTTGAGGATCCAAAATTAAGGGAGACATTCATTTCACTTAAAGGGAACCAGATACGCTTGAGGTGGTTAGAAG
AAAAGTGTCACAAATGAAGAACTACCTTAAGATATACATTGGAAGAATACACGAAAAAAGTTATAAAAAAGAAGTGCTTGGTGGCTAACAAGTTTCACGCCATCAAATTG
AAAGCAAAATCGGTGGGCGCTGCTGGGCTTAATCATCATCTTTAAATTCTCTGTTCAAAGGGAAATGTAATACTCTGTCAACTTCTTGAGCTCCATGGATAGATTTTTAA
GCGAGTTCCAAGTACCAGAAGAAGAAAAATGAAGCAAAAGATGGATAAAAGGGGACATACCTGCGATCTAAATATCGAGGTTGAATTCCAGAGCCTTGACATGTAGTGCA
TGTCAATGTGCCAACACCATCACAGTTAATACACCGGGAGACTTCTTTTTCATCTCCACCAAGTTCTACGGTCACATTGCCAGTTCCCATGCAAAATCTGCATTTCTCTG
TGGACGAATTATTCATTTCCAAACAAGGCTTTAACCAAAGGATATACAATTGGAGACGGACAAGAACAGGGAGGAGACACACAGGAGAGTTCCATGAGCAACAATTTAGA
ATGATTGAGACCTATGTCCTGAAATAATTTCATGAAACAAAGATGAACTCTAAAACAGTGAATAACTTACGTGCTCCCGAACCACTGCAGGGAAAGCAGGGCTGAGTATT
TTCACGCTTTGCCTACAACACAAACACATGGATTATAAGCTGAAAATGAAGAAAACCCAATTTATTAGGCACAGACTTGAAGAACAGGGGAATAACTCTTACAGAATTAT
CTATTTGGGTTTCATAGAATACCGGAATGCCTATTCCAACTGCGACACTCACCAGCCCAACTGAAAGTGCCACAACCTGAAACAAAGAGTACTTCTTTCTTCACTTTCAC
TTCCTTTTCAATCAAATAGAGAGCATGGAGAAATTGGGGATAGAATAACTTAGCCAAATACTATTTGAATGAAAAATCATGAGAGTAGACGAATAAGGAACCGTGTTTTG
GTCAAGATCTACTGCTCTGATGCGTGGATATGATGCTGGCGATCGTTGATTTCTAGAGAATGTTACAGATAGAGAGGTAGATGAAATCGGCTTGAGAGGACAATACAGAA
ATGGAGAGTGGAGGCGAGAAAGCGAAGATGCTACTGTCATTTCTGAATTCCTTGGACTCGATTCCTTTGCTTCTGAGAGCTCCGAATCAAAGAGAAAAAGAAAGTCAGTC
TCAGTCCTAATTCCTAAAGAAGCACTTGAAGCTGTGGTTTGTTTCAAAGCTAGAAAGCCTCACCACGCATTCCAGATTTGGATATCCGTTATTGGCTGCGTCTGCTCTGC
TACTGACCCACCACTCATCCAACTGCCTGCCATCACCAAAAATAGGG
Protein sequenceShow/hide protein sequence
MFKGKLYNISGQDICRSGCQAHSAEIDKTMCWIRKHEITFAMKSISKLISTSNNNQLRKHLDVLRVTSPLMIRAQHRSEVIKVEDCPIYEQLCTIFIESAAGGKYA