; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G100830 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G100830
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationCicolChr05:29106324..29107566
RNA-Seq ExpressionCcUC05G100830
SyntenyCcUC05G100830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]1.1e-6386.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK K   G NLQRSASMPPFNT+KGL  +M+SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]3.0e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]8.4e-5982.19Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG  LDMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]2.9e-5982.88Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG LLDMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.2e-6590.21Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNAW
        MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEKKME GGNLQRSAS+PPF T KG LL+MESE  LEKPKKNAW
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNAW

Query:  WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GG+SA
Subjt:  WRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein5.5e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK K   G NLQRSASMPPFNT+KGL  +M+SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEK-KMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A1S3CST6 uncharacterized protein LOC1035039301.4e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A1.4e-6486.81Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAIL P+E+ EEK+ E  G NLQRSASMPPFNT+KGLL +++SET LEKP+KN 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKME-YGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGG+SA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A6J1FHE8 uncharacterized protein LOC1114457954.0e-5982.19Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG  LDMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

A0A6J1J1T2 uncharacterized protein LOC1114810651.4e-5982.88Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAIL P++S EE KK+E+GG NLQRS+S+PPFNT+KG LLDMESE  L+ KPKK
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEE-KKMEYGG-NLQRSASMPPFNTKKGLLLDMESETKLE-KPKK

Query:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGG+ A
Subjt:  NAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGISA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein6.2e-2042.86Show/hide
Query:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+   EEH++A              +   + +  +      KK +    E+++     K + 
Subjt:  MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNA

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
        WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAATAAATCGTTGACAAAAGAAGAGATTGAAGCGTTCTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGGCCATATGAGAGCTATGAGGAAAAGAAAATGGAATATGGTGGAAATCTTCAGAGATCAGCCTCTATGC
CACCATTCAATACAAAGAAGGGTTTATTATTGGACATGGAATCTGAAACTAAGCTAGAGAAGCCAAAGAAAAACGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAAC
GAACCGCCGGAGACGGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCATCAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
TTGAAAGTTAATAAATTAATTAACATATCGTTATCAATCAATAAAATGGCCACCAAACCCATTACTTCATTAAAATCAACATACTAAAGGCTACAAAAATAAATTTTAAT
ATAAAGTTTTAGATAAGATCGGAGCCAAGAGATAAAGACACACTGCTCGCCGGACGCCATCTTTTTATTTATATATATTGTTTGCTCTTCGTACTAAGAAACCATTGCAT
ATTATCATACATCTGATTTATCACCATTAATATTTTGAACCAAAAGTTTGGTTTTTGAGAGATGGGTTCTCTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAG
AAGTGAGTCACCGGAGGAATAAATCGTTGACAAAAGAAGAGATTGAAGCGTTCTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGGCCATAT
GAGAGCTATGAGGAAAAGAAAATGGAATATGGTGGAAATCTTCAGAGATCAGCCTCTATGCCACCATTCAATACAAAGAAGGGTTTATTATTGGACATGGAATCTGAAAC
TAAGCTAGAGAAGCCAAAGAAAAACGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCGCCGGAGACGGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCC
ACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCATCAGTGCTTGAGAAAGCTTTTTATCCTTTGTTGCGTCGGTGATGGAAGGGGGGGGGGGGGGGGTTT
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILRPYESYEEKKMEYGGNLQRSASMPPFNTKKGLLLDMESETKLEKPKKNAWWRRSNWAFLN
EPPETEGSGNSYVSQFHVANMAASRLGRGGISA