; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G103140 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G103140
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationCicolChr05:30939556..30940290
RNA-Seq ExpressionCcUC05G103140
SyntenyCcUC05G103140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3365.03Show/hide
Query:  PAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGG
        PAFCPPLSPFE  PPFSFNA  V  AGGGD    G GAGGE++++                  GGGGLSVV D GGGGGL VVLD GGGGGL VVLD  G
Subjt:  PAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGG

Query:  GGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGG
        GGGL VVLD  GGGGL  VLD  GGGGL VVLD  GGGGL VVLD GGGG  SVV + GGGGG
Subjt:  GGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGG

XP_016900208.1 PREDICTED: loricrin-like [Cucumis melo]5.3e-3775.82Show/hide
Query:  GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDA
        GGGGGDEL VLD     GGGG+SVVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SVV D GGGGG+S V D GGGGG+ VVLD GGGGG+SVV D 
Subjt:  GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDA

Query:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG
        GGGGG+SVV D GGGGG+SV+LD GGGGGVSVVLDGG GGGGVSV LDG  GG
Subjt:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG

XP_022957272.1 loricrin-like [Cucurbita moschata]1.3e-3266.67Show/hide
Query:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL
        MQ++P +PNKPAP ITPNA PAFCPPLSPFE  PPFSFNA  V  AGGGD    G GAGGE ML  GGGGG  + V DG    GGGGL VVLD GGGGGL
Subjt:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL

Query:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG
         VVLD  GGGGL VVLD  GGGGL VVLD GGG         GGGG  SVV + GGGGG
Subjt:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]4.3e-3168.03Show/hide
Query:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL
        MQ++P +PNKPAP ITPNA PAFCPPLSPFE  PPFSFNA  V  AG GD    G GAGGE ML  GGGGG  + V DG    GGGG SVV + GGGGGL
Subjt:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL

Query:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGG
         VVLDA GGGGL VVLD  GGGGL VVLD GGGGG   V+  GGGGG
Subjt:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGG

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]2.9e-6769.41Show/hide
Query:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGG-------EGEGGGGLSVVLD
        MQI+P +PNKP P ITPNA PAFCPPL+PFEPPPPFSFNA L    GGGD    G GAGG++ + LGGGGG EL VLDGG       +G+GGGG SVVL 
Subjt:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGG-------EGEGGGGLSVVLD

Query:  AGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGG
         GGGGG SV LD GGGGG SV LD GGGGG SV LD GGGGG S  LD GGGGG+SV LD GGGGG SV LD GGGGG SV LD GGGGG SV LD GGG
Subjt:  AGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGG

Query:  GGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGGGDTS
        GG SV LDGG GGGG SV LDG  GGGGG  V LDG GGGG S+  DG GGGD S
Subjt:  GGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGGGDTS

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like2.6e-3775.82Show/hide
Query:  GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDA
        GGGGGDEL VLD     GGGG+SVVLD GGGGG+SVV D GGGGG+SVV D GGGGG+SVV D GGGGG+S V D GGGGG+ VVLD GGGGG+SVV D 
Subjt:  GGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDA

Query:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG
        GGGGG+SVV D GGGGG+SV+LD GGGGGVSVVLDGG GGGGVSV LDG  GG
Subjt:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGG

A0A2B7ZNF9 Uncharacterized protein (Fragment)2.4e-1955.07Show/hide
Query:  GGGDGTGAGGEIMLALGGGGGDELFVLDGGEG------EGGGGLSVVLDA-GGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAG
        GGG G   GG  +L  GGGGG  + +  GG G      EGGGG SVVL A GGGGG SVVL AGGGGG       GGGGG + VL AGGGGG  G    G
Subjt:  GGGDGTGAGGEIMLALGGGGGDELFVLDGGEG------EGGGGLSVVLDA-GGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAG

Query:  GGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGVSVVLD----GGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIE
         GGG + VL AGGGGG SVVL AGGGG   +    GGGGG + VL A GGGGGVSVVL     GG GGGG  V+     G GGG   VL   GGGG S+ 
Subjt:  GGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGVSVVLD----GGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIE

Query:  FDGEGGG
            GGG
Subjt:  FDGEGGG

A0A6I8U367 Uncharacterized protein6.1e-1546.89Show/hide
Query:  LVRDAGGG--------DGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGL
        +V+  GGG         G G GG +  + GGGGG  +      + +GGGG  VV+ + GGGG  VV  + GGGG  VV+ + GGGG  VV  + GGGGG 
Subjt:  LVRDAGGG--------DGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDA-GGGGGL

Query:  SGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLS
          V   GGGGG  VV   GGGGG  VV   GGGGG  VV   GGGGG+ V    GGGGGV V    G GGGG  VV+    GGGGG+ V     GGGG+ 
Subjt:  SGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLS

Query:  IEFDGEGGG
        ++  G GGG
Subjt:  IEFDGEGGG

A0A6J1GYP3 loricrin-like6.5e-3366.67Show/hide
Query:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL
        MQ++P +PNKPAP ITPNA PAFCPPLSPFE  PPFSFNA  V  AGGGD    G GAGGE ML  GGGGG  + V DG    GGGGL VVLD GGGGGL
Subjt:  MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGD----GTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGL

Query:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG
         VVLD  GGGGL VVLD  GGGGL VVLD GGG         GGGG  SVV + GGGGG
Subjt:  SVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGG

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like4.8e-2865.25Show/hide
Query:  IHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDA
        ++P +PNKPAP ITP   PAFCPPLSPFE  PPFSFNAS V  AGGGD   +G        GGGG    V DG  G GGGGL  VLD GGGGGL VVLD 
Subjt:  IHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDA

Query:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGG
        GGGGGL VVLD  GGGGL VVLD GGGGG   V+  GGGGG
Subjt:  GGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGG

SwissProt top hitse value%identityAlignment
P09789 Glycine-rich cell wall structural protein 15.5e-0543.88Show/hide
Query:  AGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLS
        AGGG G GAGG     LGGGGG    +  GG G  GGG  V   AG GGG       G GGG+     AGGG G       GGGGG+ G    GGG G  
Subjt:  AGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLS

Query:  VVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGGG
          +  G GGGL   +  GGGGG      +GGGGG+      GGG G    + GG GGG       G  GGGGG      G GGGGL     G GGG
Subjt:  VVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGGG

P27483 Glycine-rich cell wall structural protein7.2e-0541.58Show/hide
Query:  GGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSV
        G G G GAGG      GGG G  L    GG   GGGG+      G GGGL      G GGG    +  G GGG    L  G GGG+ G    G GGGL  
Subjt:  GGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSV

Query:  VLDAGGGGGLSVVLDAGGGGGL----SVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSG---GGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEG
         +  G GGG      AGGGGGL       +  G GGG    L  G GGG+     GGSG   GGG+     G +GGGGG        GGGGL     G G
Subjt:  VLDAGGGGGLSVVLDAGGGGGL----SVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSG---GGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEG

Query:  GG
        GG
Subjt:  GG

Arabidopsis top hitse value%identityAlignment
AT2G32690.1 glycine-rich protein 232.5e-0547.88Show/hide
Query:  GEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAG
        G+G GGGG       GGGGGL      GGGGGL      GGGGGL      GGGGGL G    GGGGGL      GGGGGL      GGGGGL      G
Subjt:  GEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAG

Query:  GGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGG
        GGGGL      G GGG      GG GGGG      G  GGGGG F    G  GGG      G GG
Subjt:  GGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLFVVLDGSGGGGLSIEFDGEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCCATCCTATAGATCCCAACAAACCTGCTCCTACGATCACTCCAAACGCAACCCCTGCCTTTTGTCCGCCGCTCAGTCCTTTTGAACCTCCACCACCCTTTTC
ATTCAATGCTTCGCTAGTCCGCGACGCCGGTGGTGGAGATGGCACTGGTGCGGGTGGTGAGATAATGTTGGCATTGGGTGGCGGTGGTGGAGATGAGTTGTTCGTATTGG
ATGGCGGTGAAGGTGAAGGTGGGGGTGGACTATCGGTTGTGTTGGACGCTGGAGGCGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGAGGTGGACTTTCAGTT
GTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGTGGTGGACTTTCAGGTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGT
GTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTAT
TGGACGCTGGCGGGGGAGGTGGAGTATCAGTTGTGTTGGATGGTGGTAGCGGCGGTGGTGGAGTATCAGTTGTGTTGGATGGCAGCAGTGGTGGTGGTGGTGGACTGTTT
GTTGTGTTGGATGGCAGCGGCGGTGGAGGACTGTCAATTGAGTTCGATGGCGAGGGAGGAGGAGATACATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCCATCCTATAGATCCCAACAAACCTGCTCCTACGATCACTCCAAACGCAACCCCTGCCTTTTGTCCGCCGCTCAGTCCTTTTGAACCTCCACCACCCTTTTC
ATTCAATGCTTCGCTAGTCCGCGACGCCGGTGGTGGAGATGGCACTGGTGCGGGTGGTGAGATAATGTTGGCATTGGGTGGCGGTGGTGGAGATGAGTTGTTCGTATTGG
ATGGCGGTGAAGGTGAAGGTGGGGGTGGACTATCGGTTGTGTTGGACGCTGGAGGCGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGAGGTGGACTTTCAGTT
GTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTGTTGGATGCTGGCGGGGGTGGTGGACTTTCAGGTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGT
GTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCGGTTGTGTTGGATGCTGGCGGAGGAGGTGGACTTTCAGTTGTAT
TGGACGCTGGCGGGGGAGGTGGAGTATCAGTTGTGTTGGATGGTGGTAGCGGCGGTGGTGGAGTATCAGTTGTGTTGGATGGCAGCAGTGGTGGTGGTGGTGGACTGTTT
GTTGTGTTGGATGGCAGCGGCGGTGGAGGACTGTCAATTGAGTTCGATGGCGAGGGAGGAGGAGATACATCTTGA
Protein sequenceShow/hide protein sequence
MQIHPIDPNKPAPTITPNATPAFCPPLSPFEPPPPFSFNASLVRDAGGGDGTGAGGEIMLALGGGGGDELFVLDGGEGEGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSV
VLDAGGGGGLSVVLDAGGGGGLSGVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGLSVVLDAGGGGGVSVVLDGGSGGGGVSVVLDGSSGGGGGLF
VVLDGSGGGGLSIEFDGEGGGDTS