; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC05G106540 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC05G106540
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr05:33710338..33716872
RNA-Seq ExpressionCcUC05G106540
SyntenyCcUC05G106540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034426.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]2.8e-1670.49Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S      M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
KAG6601439.1 hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1777.05Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S  G AIMIHLGQDF ASQ AHQK QPLQKLLN RMDLQYNDYP+   N RHTPKPTG+V
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
KAG7032221.1 hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-1775.41Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S  G AIMIHLGQDF ASQ AHQ  QPLQKLLN RMDLQYNDYP+   N RHTPKPTG+V
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
KGN51928.1 hypothetical protein Csa_009059 [Cucumis sativus]4.3e-1772.13Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S     +MIHLGQDFPASQ  +QKNQPL+ L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
XP_008446367.1 PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]2.8e-1670.49Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S      M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
TrEMBL top hitse value%identityAlignment
A0A0A0KQN6 Uncharacterized protein2.1e-1772.13Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S     +MIHLGQDFPASQ  +QKNQPL+ L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
A0A1S3BEE6 uncharacterized protein LOC1034891291.4e-1670.49Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S      M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
A0A5A7SX31 Putative lipoprotein yfhM1.4e-1670.49Show/hide
Query:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
        +S      M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY I G NPRHTPKPTGKV
Subjt:  ISFFGVAIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPILGPNPRHTPKPTGKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTCTCATTAATAACTGTCTCCTTCCACATCAGCACCGTCTCCAACAAGATCCCACCAACAAAAAGATCCACGAAAAGCCTGATCTAAACACATCCCAG
CCGTCCATCTACACTACAAAAAAGTTATGGGACACGTGTCGGTCCCAGAAGGAGTATATCTTCCCTTTAAAAATATCTTGTTCTAGTGGCTGTCCTCCCGTCCAA
TTAGGAGGCATATCTTTCTTTGGGGTAGCAATTATGATCCATCTTGGCCAGGATTTTCCAGCCTCCCAAGGTGCACACCAGAAGAATCAGCCACTGCAGAAATTG
TTGAATGGCAGAATGGATTTGCAGTACAATGATTATCCAATACTTGGACCTAATCCTCGCCACACTCCTAAGCCAACGGGAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTCTCATTAATAACTGTCTCCTTCCACATCAGCACCGTCTCCAACAAGATCCCACCAACAAAAAGATCCACGAAAAGCCTGATCTAAACACATCCCAG
CCGTCCATCTACACTACAAAAAAGTTATGGGACACGTGTCGGTCCCAGAAGGAGTATATCTTCCCTTTAAAAATATCTTGTTCTAGTGGCTGTCCTCCCGTCCAA
TTAGGAGGCATATCTTTCTTTGGGGTAGCAATTATGATCCATCTTGGCCAGGATTTTCCAGCCTCCCAAGGTGCACACCAGAAGAATCAGCCACTGCAGAAATTG
TTGAATGGCAGAATGGATTTGCAGTACAATGATTATCCAATACTTGGACCTAATCCTCGCCACACTCCTAAGCCAACGGGAAAAGTTTGA
Protein sequenceShow/hide protein sequence
MVSLINNCLLPHQHRLQQDPTNKKIHEKPDLNTSQPSIYTTKKLWDTCRSQKEYIFPLKISCSSGCPPVQLGGISFFGVAIMIHLGQDFPASQGAHQKNQPLQKL
LNGRMDLQYNDYPILGPNPRHTPKPTGKV