CuGenDBv2

Gene ID	CcUC05G109100
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	cytochrome c oxidase assembly factor 5
Genome location	CicolChr05:35759021..35762164
RNA-Seq Expression	CcUC05G109100
Synteny	CcUC05G109100
Gene Ontology terms	NA
InterPro domains	IPR018793 - Cytochrome c oxidase assembly protein PET191

Homology

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GenBank top hits

e value

%identity

Alignment

XP_007149578.1 hypothetical protein PHAVU_005G082100g [Phaseolus vulgaris]

3.7e-13

51.14

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +V+ R+YREC GEKSPCIPSECVGLRETYFNCKRGQA+                                     VDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

XP_008446948.1 PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo]

2.6e-14

54.55

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

XP_021615629.1 mitochondrial protein pet191 homolog [Manihot esculenta]

1.8e-12

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +V+ R+YRECAGEKSPCIPSECVGLRETYFNCKRG                                       Q+DMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

XP_022956695.1 cytochrome c oxidase assembly factor 5 [Cucurbita moschata]

5.7e-14

53.41

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

XP_031405462.1 mitochondrial protein pet191 homolog [Punica granatum]

3.7e-13

52.27

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQ R+YRECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRS4 Uncharacterized protein

1.2e-14

54.55

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

A0A1S3BGA9 cytochrome c oxidase assembly factor 5

1.2e-14

54.55

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

A0A6J1CDL1 cytochrome c oxidase assembly factor 5

1.2e-14

54.55

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

A0A6J1GYH3 cytochrome c oxidase assembly factor 5

2.8e-14

53.41

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

A0A6J1IEJ6 cytochrome c oxidase assembly factor 5

2.8e-14

53.41

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Query:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        +VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10865.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

1.6e-14

47.67

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Query:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY
        + R+ R+C GEKSPCIPSECVGLRETYFNCKRG                                       QVDMRARIRGNKGY
Subjt:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGASRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGY

AT1G10865.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

2.0e-12

82.35

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Query:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

Sequences

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CDS sequence

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ATGGCCCTTTCTTTACTTCTTTCGTCTTCTTCTCCGTCGGGCGCTCACAGCAATCGGTCGTCGCTGTTGCCTTTCACCAGGAAGATAATTGTGATTCGTCAAGCGAAGAT
TCAAGACATAGCAGGAATCTTTGAGGAGGGTAAAATTAAGGGGAAGGATGTCGAAGTCTTGCAAAGGTTTGGCGATGGAATTGGTCAAGTTCAGAACCGAACTTACAGGG
AATGTGCTGGAGAGAAGAGTCCTTGCATACCTAGTGAATGTGTGGGATTAAGAGAAACATATTTCAACTGTAAAAGAGGCCAGGCAAATCTCAATCGTGCGACTGGTGCT
TCAAGGTGTTCTGAATTACACTTCATGATCCAACAACATGGAAACTTATGTAATGCATCTCACAACACTCAGTGCACCTCAAAATTCCAGGTTGACATGAGGGCGAGGAT
TCGAGGGAACAAAGGATATGCTCCATACTTCAGAATGACGGTTTCTTCTTCCTTAATAAGGTCAATGTATTAG

mRNA sequence

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AGGAAACGTGTTAATAAACTTAATTAGGACCATTTGTGTATTATCCCTTAATAAACCCTAAATAGAGGCCAAAATATGTTGAACGGCGGCCCATTTTGTATCGTAGCCCA
AACAAAATGGCCCTTTCTTTACTTCTTTCGTCTTCTTCTCCGTCGGGCGCTCACAGCAATCGGTCGTCGCTGTTGCCTTTCACCAGGAAGATAATTGTGATTCGTCAAGC
GAAGATTCAAGACATAGCAGGAATCTTTGAGGAGGGTAAAATTAAGGGGAAGGATGTCGAAGTCTTGCAAAGGTTTGGCGATGGAATTGGTCAAGTTCAGAACCGAACTT
ACAGGGAATGTGCTGGAGAGAAGAGTCCTTGCATACCTAGTGAATGTGTGGGATTAAGAGAAACATATTTCAACTGTAAAAGAGGCCAGGCAAATCTCAATCGTGCGACT
GGTGCTTCAAGGTGTTCTGAATTACACTTCATGATCCAACAACATGGAAACTTATGTAATGCATCTCACAACACTCAGTGCACCTCAAAATTCCAGGTTGACATGAGGGC
GAGGATTCGAGGGAACAAAGGATATGCTCCATACTTCAGAATGACGGTTTCTTCTTCCTTAATAAGGTCAATGTATTAG

Protein sequence

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MALSLLLSSSSPSGAHSNRSSLLPFTRKIIVIRQAKIQDIAGIFEEGKIKGKDVEVLQRFGDGIGQVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANLNRATGA
SRCSELHFMIQQHGNLCNASHNTQCTSKFQVDMRARIRGNKGYAPYFRMTVSSSLIRSMY

CcUC05G109100 (gene) of Watermelon (PI 537277) v1 genome