; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G110700 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G110700
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
Genome locationCicolChr06:1228572..1232416
RNA-Seq ExpressionCcUC06G110700
SyntenyCcUC06G110700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2623000.1 unnamed protein product [Spirodela intermedia]2.5e-2854.61Show/hide
Query:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT
        LLRYPVA+TT S S   P  SST  R N    GTT  SPDLIF  APMS+TG          G I GR RP F   P TSH R+ + LSTS+ GSHFI  
Subjt:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT

Query:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         ASSN        RTT++G+A W  +SRE+SMPELPQPTT TFFP    PDL
Subjt:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

CAA7398972.1 unnamed protein product [Spirodela intermedia]2.3e-3458.55Show/hide
Query:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT
        LLRYPVA+TT S S   P  SST  R N    GTT  SPDLIF  APMS+TGV P ++LSS GPI GR RP F   P TSH R+ + LSTS+ GSHFI  
Subjt:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT

Query:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         ASSN        RTT++G+A W  +SRE+SMPELPQPTT TFFP    PDL
Subjt:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

CAA7403302.1 unnamed protein product [Spirodela intermedia]1.1e-2058.93Show/hide
Query:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM
        T STS   P T ST  R N L PGTTLMSPDLIF  APMSRTGVFP  F SS GP +GR  PY S  P TSHA  +K LST Q GSHFI   A SN    
Subjt:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM

Query:  LTELRTTIDGEA
            RTT+ G+A
Subjt:  LTELRTTIDGEA

KAF7004581.1 hypothetical protein CFC21_019792 [Triticum aestivum]3.2e-2047.33Show/hide
Query:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM
        T ST +  P  S+    V R++PGTT++ P LI ++AP+S TG  P   LS +GP  GR  P  S  P TS AR    LST+Q GSH   ++ASS   L 
Subjt:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM

Query:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         T         RTT+ G A W  +SRETSMPE PQPTT+T FP+  SPDL
Subjt:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

KAF7019308.1 hypothetical protein CFC21_032500 [Triticum aestivum]1.4e-1846.53Show/hide
Query:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM
        T ST +  P  S+    V R++PGTT++ P LI ++AP+S TG  P   LS +GP  GR  P  S  P TS AR    LST Q GSH + ++ASS   L 
Subjt:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM

Query:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPV
         T         RTT+ G A W  +SRETSMPE PQPTT+T FP+
Subjt:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPV

TrEMBL top hitse value%identityAlignment
A0A3B6B6V3 Uncharacterized protein1.6e-2047.33Show/hide
Query:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM
        T ST +  P  S+    V R++PGTT++ P LI ++AP+S TG  P   LS +GP  GR  P  S  P TS AR    LST+Q GSH   ++ASS   L 
Subjt:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM

Query:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         T         RTT+ G A W  +SRETSMPE PQPTT+T FP+  SPDL
Subjt:  LTE-------LRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

A0A7C8YUE9 Uncharacterized protein6.4e-2259.32Show/hide
Query:  TLLRYPVAKTTESTSSFSPLTSSTWLRVNRLIP-GTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFI
        TLLRYPVA+TTES S  SPL S T    N LIP GTTL+ PDLI  N P SRTGVFP  FLSS GP  G LRPYFS+ P  S AR    LST+ RG+HF 
Subjt:  TLLRYPVAKTTESTSSFSPLTSSTWLRVNRLIP-GTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFI

Query:  ITIASSNFVLMLTELRTT
          IA+SN  L  T    T
Subjt:  ITIASSNFVLMLTELRTT

A0A7I8IXK3 Hypothetical protein1.2e-2854.61Show/hide
Query:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT
        LLRYPVA+TT S S   P  SST  R N    GTT  SPDLIF  APMS+TG          G I GR RP F   P TSH R+ + LSTS+ GSHFI  
Subjt:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT

Query:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         ASSN        RTT++G+A W  +SRE+SMPELPQPTT TFFP    PDL
Subjt:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

A0A7I8KNB4 Hypothetical protein1.1e-3458.55Show/hide
Query:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT
        LLRYPVA+TT S S   P  SST  R N    GTT  SPDLIF  APMS+TGV P ++LSS GPI GR RP F   P TSH R+ + LSTS+ GSHFI  
Subjt:  LLRYPVAKTTESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIIT

Query:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL
         ASSN        RTT++G+A W  +SRE+SMPELPQPTT TFFP    PDL
Subjt:  IASSNFVLMLTELRTTIDGEALWLHKSRETSMPELPQPTTTTFFPVNFSPDL

A0A7I8L0L8 Hypothetical protein5.4e-2158.93Show/hide
Query:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM
        T STS   P T ST  R N L PGTTLMSPDLIF  APMSRTGVFP  F SS GP +GR  PY S  P TSHA  +K LST Q GSHFI   A SN    
Subjt:  TESTSSFSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLM

Query:  LTELRTTIDGEA
            RTT+ G+A
Subjt:  LTELRTTIDGEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATTATTTGTATTTTTCTTCTTTACATTATGAAGAAACCTTAGCTAAAAATTCATCAATGGCAGCCATGTTCAGAATTGGGAAATGCAGCGTCTATGACAAGCA
GTGGTTCTCTTCTTCTGTTGCTTCGTCTCCGCCTTCCAAACATTTCCAATATCTTGAGCTATTTTCATGGCGTCTGATGAAGCCCCCGATAGCCCTCTTCTTGAGAACCC
AACTGCATAAAGCCCTGCATTTCCCTTCCACGCATGTGGTGATGCTGCTTTTGGGAATCCGGACATTGCTGCGATACCCAGTAGCCAAAACTACTGAATCTACGTCGAGC
TTTTCGCCATTGACGAGCTCTACTTGGTTGCGTGTGAACCGTTTGATTCCAGGAACTACTTTGATGTCACCGGATTTGATTTTCTCCAATGCTCCAATGTCAAGAACAGG
GGTCTTTCCTATCTCGTTTTTGAGTTCCAATGGCCCCATTGATGGCCGTTTGAGGCCGTATTTTTCAATGTTTCCGAGCACAAGCCATGCCAGGACCAACAAGAGCTTGT
CAACCAGCCAAAGGGGCAGCCATTTCATCATCACAATAGCTAGTTCGAATTTTGTTCTAATGCTTACCGAGCTTCGGACCACCATTGATGGTGAGGCATTGTGGTTGCAC
AAGTCCAGAGAAACTTCCATGCCCGAGTTGCCACAGCCAACGACCACCACTTTCTTTCCGGTGAACTTCTCTCCGGACTTGTATTCACAAGCGTGTGAGACATCACCGCA
GAACTCGCTTAATCCTTCGATTTCGGGCATTACACGCTCAGCATTCTCGCCTGTGGCCACAACGAGCCACCGGCAAATGTACTCGATCTCGCTGCGGGCTGACCCAGAAG
TCGAAACAGTCTTGACACGCCATAGGCCGCTGGGAAGTCTTCTGGGAATGGGAGTTTTGGGAGCTGGCAGAATTGCTTTGGTGAAGCTTAAGCCTGTCATAGGTGCGCTT
TTGCCACAGGGAGGCTATGCATTCAGCTCTTTCAAGGACTACAAAAGGCACCCCCTGTTCTCTAAGACAAGCAGCTGTAGCCAGCCCCGATGGCCCGGCCCCAACAATCA
CCGGACCGTTAACCCAGATGCAACGACGAGAGAAGAAGTCATCATGATCGGCAAGACGAAACAAAATGATTTGGGGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATATTATTTGTATTTTTCTTCTTTACATTATGAAGAAACCTTAGCTAAAAATTCATCAATGGCAGCCATGTTCAGAATTGGGAAATGCAGCGTCTATGACAAGCA
GTGGTTCTCTTCTTCTGTTGCTTCGTCTCCGCCTTCCAAACATTTCCAATATCTTGAGCTATTTTCATGGCGTCTGATGAAGCCCCCGATAGCCCTCTTCTTGAGAACCC
AACTGCATAAAGCCCTGCATTTCCCTTCCACGCATGTGGTGATGCTGCTTTTGGGAATCCGGACATTGCTGCGATACCCAGTAGCCAAAACTACTGAATCTACGTCGAGC
TTTTCGCCATTGACGAGCTCTACTTGGTTGCGTGTGAACCGTTTGATTCCAGGAACTACTTTGATGTCACCGGATTTGATTTTCTCCAATGCTCCAATGTCAAGAACAGG
GGTCTTTCCTATCTCGTTTTTGAGTTCCAATGGCCCCATTGATGGCCGTTTGAGGCCGTATTTTTCAATGTTTCCGAGCACAAGCCATGCCAGGACCAACAAGAGCTTGT
CAACCAGCCAAAGGGGCAGCCATTTCATCATCACAATAGCTAGTTCGAATTTTGTTCTAATGCTTACCGAGCTTCGGACCACCATTGATGGTGAGGCATTGTGGTTGCAC
AAGTCCAGAGAAACTTCCATGCCCGAGTTGCCACAGCCAACGACCACCACTTTCTTTCCGGTGAACTTCTCTCCGGACTTGTATTCACAAGCGTGTGAGACATCACCGCA
GAACTCGCTTAATCCTTCGATTTCGGGCATTACACGCTCAGCATTCTCGCCTGTGGCCACAACGAGCCACCGGCAAATGTACTCGATCTCGCTGCGGGCTGACCCAGAAG
TCGAAACAGTCTTGACACGCCATAGGCCGCTGGGAAGTCTTCTGGGAATGGGAGTTTTGGGAGCTGGCAGAATTGCTTTGGTGAAGCTTAAGCCTGTCATAGGTGCGCTT
TTGCCACAGGGAGGCTATGCATTCAGCTCTTTCAAGGACTACAAAAGGCACCCCCTGTTCTCTAAGACAAGCAGCTGTAGCCAGCCCCGATGGCCCGGCCCCAACAATCA
CCGGACCGTTAACCCAGATGCAACGACGAGAGAAGAAGTCATCATGATCGGCAAGACGAAACAAAATGATTTGGGGGATTAA
Protein sequenceShow/hide protein sequence
MKYYLYFSSLHYEETLAKNSSMAAMFRIGKCSVYDKQWFSSSVASSPPSKHFQYLELFSWRLMKPPIALFLRTQLHKALHFPSTHVVMLLLGIRTLLRYPVAKTTESTSS
FSPLTSSTWLRVNRLIPGTTLMSPDLIFSNAPMSRTGVFPISFLSSNGPIDGRLRPYFSMFPSTSHARTNKSLSTSQRGSHFIITIASSNFVLMLTELRTTIDGEALWLH
KSRETSMPELPQPTTTTFFPVNFSPDLYSQACETSPQNSLNPSISGITRSAFSPVATTSHRQMYSISLRADPEVETVLTRHRPLGSLLGMGVLGAGRIALVKLKPVIGAL
LPQGGYAFSSFKDYKRHPLFSKTSSCSQPRWPGPNNHRTVNPDATTREEVIMIGKTKQNDLGD