CuGenDBv2

Gene ID	CcUC06G110800
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Vacuolar sorting-associated protein 62
Genome location	CicolChr06:1393871..1397661
RNA-Seq Expression	CcUC06G110800
Synteny	CcUC06G110800
Gene Ontology terms	NA
InterPro domains	IPR014807 - Cytochrome c oxidase assembly factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140577.1 uncharacterized protein LOC101206927 [Cucumis sativus]

1.6e-89

90.27

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  P +SS+SIKP E+ VN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEK RNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINL+EKFAPAACVSCTDCQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

XP_022991411.1 uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima]

1.3e-88

86.91

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF+SIFKRSP P +SSSS++P E+GVN+S GRKAVSFVL+TVTGGVALSALDDLAIY SCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAA--CVSCTDCQPP--EKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWI FLRPRDWDILIMDALLHVPENEGKQ+TLRINLTEKFAPAA  CV+CTDCQ P  EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAA--CVSCTDCQPP--EKR

XP_023547892.1 uncharacterized protein LOC111806704 isoform X1 [Cucurbita pepo subsp. pepo]

7.8e-89

87.23

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF+SIFKRSP P +SSSS++P E+GVN+S GRKAVSFVL+TVTGGVALSALDDLAIY SCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAP---AACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWI FLRPRDWDILIMDALLHVPENEGKQ+TLRINLTEKFAP   AACV+CTDCQ PE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAP---AACVSCTDCQPPE

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]

4.7e-94

94.59

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFVSIFKRSP P +SSSSIKP EDGVN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWI FLRPRDWDILIMDALLHVP NEGKQKT+RINLTEKFAPAACVSCTDCQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]

3.4e-92

94.05

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFVSIFKRSP P  +SSSIKP EDGVN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWI FLRPRDWDILIMDALLHVP NEGKQKT+RINLTEKFAPAACVSCTDCQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KF26 Uncharacterized protein

7.6e-90

90.27

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  P +SS+SIKP E+ VN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEK RNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINL+EKFAPAACVSCTDCQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

A0A1S3CBF0 uncharacterized protein LOC103498925 isoform X1

6.4e-89

90.27

Show/hide

Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  P +SS+SIKP E+ VN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFAPAACVSCT CQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

A0A5D3DMW4 Vacuolar sorting-associated protein 62

6.4e-89

90.27

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  P +SS+SIKP E+ VN+S GRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFAPAACVSCT CQPPE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPE

A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X1

2.7e-87

85.56

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKR +SIFKRSP P +SSSS++P E+GVN+S GR AVSFVL+TVTGGVALSALDDLAIY SCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAP--AACVSCTDCQPPE
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGE+SWI FLRPRDWDILIMDALLHVPENEGKQ+T+RINLTEKFAP  AACV+CTDCQ PE
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAP--AACVSCTDCQPPE

A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X1

6.4e-89

86.91

Show/hide

Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF+SIFKRSP P +SSSS++P E+GVN+S GRKAVSFVL+TVTGGVALSALDDLAIY SCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAA--CVSCTDCQPP--EKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWI FLRPRDWDILIMDALLHVPENEGKQ+TLRINLTEKFAPAA  CV+CTDCQ P  EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAA--CVSCTDCQPP--EKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20390.1 unknown protein

3.9e-62

65.43

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        M A+RF S FK       SS+S      G   S GRKAVSFVLITVTGGVALSALDDL+IYR CSSKA+EK  N++ +I+AIGEPI KGPWYNASLAV+H
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQP--PEK
        +RHS+SC+FPV GPQGTGIL LKAVRNGEDS   FL+ RDWDILIMDAL+HVP NEG Q+TLRIN+T+   P+        +P  PEK
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQP--PEK

AT2G20390.2 unknown protein

1.1e-56

54.91

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Query:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH
        M A+RF S FK       SS+S      G   S GRKAVSFVLITVTGGVALSALDDL+IYR CSSKA+EK  N++ +I+AIGEPI KGPWYNASLAV+H
Subjt:  MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRI
        +RHS+SC+FPV GPQGTGIL LKAVRNG                                    EDS   FL+ RDWDILIMDAL+HVP NEG Q+TLRI
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRI

Query:  NLTEKFAPAACVSCTDCQP--PEK
        N+T+   P+        +P  PEK
Subjt:  NLTEKFAPAACVSCTDCQP--PEK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTGGCGAAAAGGTTCGTTTCCATATTCAAGCGCTCTCCAAATCCAGAGTCTTCCAGCAGTTCCATAAAGCCATTGGAGGATGGGGTGAATAGATCCTTGGGT
CGGAAAGCAGTCTCTTTTGTACTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCGTAGCTGTAGCAGCAAAGCCATAGAG
AAAGCCAGAAACAATCAAGCAGTTATAGATGCTATTGGAGAACCCATTGCCAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTA
TCCTGCACGTTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGAGAGGATTCCTGGATTCCTTTTCTCCGGCCTCGAGAC
TGGGACATTCTGATCATGGATGCTCTCCTCCATGTTCCTGAAAACGAAGGTAAGCAGAAAACATTGCGTATTAATCTCACTGAGAAGTTTGCCCCCGCTGCTTGT
GTCTCATGCACTGATTGTCAGCCTCCAGAGAAGAGATGA

mRNA sequence

Show/hide mRNA sequence

ATTAAAGACACCTTATTAGGGAAGCGCTGAGCGATTGAAGGAGCAAGCAAAGCTGAAAATGCTGGCGAAAAGGTTCGTTTCCATATTCAAGCGCTCTCCAAATCC
AGAGTCTTCCAGCAGTTCCATAAAGCCATTGGAGGATGGGGTGAATAGATCCTTGGGTCGGAAAGCAGTCTCTTTTGTACTTATTACTGTTACTGGTGGTGTAGC
TTTGAGTGCTTTAGATGACCTTGCCATTTATCGTAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAGAAACAATCAAGCAGTTATAGATGCTATTGGAGAACCCAT
TGCCAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCA
ACTGAAGGCAGTTCGTAATGGAGAGGATTCCTGGATTCCTTTTCTCCGGCCTCGAGACTGGGACATTCTGATCATGGATGCTCTCCTCCATGTTCCTGAAAACGA
AGGTAAGCAGAAAACATTGCGTATTAATCTCACTGAGAAGTTTGCCCCCGCTGCTTGTGTCTCATGCACTGATTGTCAGCCTCCAGAGAAGAGATGAAGTCAGCT
TATAAGTTATTGAGAAACTAATATCAAATGTTAGCAGTTTCTATTAGTTTTCTGTCCCGACATAATTTTGAGTTAACCATCAAAGCGTTCGTTATCCCTACCAAA
ATAATATTTTCTTTGAGGTTGAGTTTAAACCATGGTGGAACCAGTCTAGAAGATTTAGTATTATTCAACTTTGCTGACATCAAATGTGGCAAAAGTTATATGATT
CTCCTGTAAAACCCATGTTATAACAGAAATAATAGCAATTATTCAC

Protein sequence

Show/hide protein sequence

MLAKRFVSIFKRSPNPESSSSSIKPLEDGVNRSLGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSL
SCTFPVSGPQGTGILQLKAVRNGEDSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFAPAACVSCTDCQPPEKR

CcUC06G110800 (gene) of Watermelon (PI 537277) v1 genome