; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G111440 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G111440
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionrRNA-processing protein fcf2
Genome locationCicolChr06:2118894..2123812
RNA-Seq ExpressionCcUC06G111440
SyntenyCcUC06G111440
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
InterPro domainsIPR014810 - Fcf2 pre-rRNA processing, C-terminal
IPR039883 - Fcf2/DNTTIP2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592956.1 hypothetical protein SDJN03_12432, partial [Cucurbita argyrosperma subsp. sororia]4.2e-9389.8Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MS +KP+I LSWEPKLP SSSGI+TK C+KS+SQAEN LVWK NSELVDGLFVPPN PKKLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEE+NRP GNDKWKIRGR SRKRAK+RR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

XP_008459856.1 PREDICTED: rRNA-processing protein fcf2 [Cucumis melo]4.8e-9792.86Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MSERKPIIGLSWEPKLPASSSGI+TKTC+KSN+QAEN +VWK+NSELVDGLFVPPN PKKLNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE+NRP GNDKWKIRG HSRKRAKDRR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

XP_011656806.1 rRNA-processing protein fcf2 [Cucumis sativus]9.0e-9692.35Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MS+ KPIIGLSWEPKLPASSSGI+ KTC+KSNSQAEN LVWK+NSELVDGLFVPPN PKKLNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE+NRP GNDKWKIRG HSRKRAKDRR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

XP_022155405.1 rRNA-processing protein fcf2 [Momordica charantia]1.1e-9390.31Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MSE+KP+IGLSWEPKL  SSSGI+TKTC+KS+ Q E+SLVWKTN+ELVDGLFVPPN PKKLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDKWKIRGRHSRKRAK+RR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

XP_038876081.1 rRNA-processing protein fcf2 [Benincasa hispida]1.5e-9894.9Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MSE+KPIIGLSWEPKLPASSSGIRTK C+KSN+QAEN LVWKTNSELVDGLFVPPN PKKLNKLLRKQV DTAGRNWFDMPAQT+TPEVEKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEE+NRPAGNDKWKIRGRHSRKRAKDRR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

TrEMBL top hitse value%identityAlignment
A0A0A0K9M7 Fcf2 domain-containing protein4.4e-9692.35Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MS+ KPIIGLSWEPKLPASSSGI+ KTC+KSNSQAEN LVWK+NSELVDGLFVPPN PKKLNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE+NRP GNDKWKIRG HSRKRAKDRR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

A0A1S3CB58 rRNA-processing protein fcf22.3e-9792.86Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MSERKPIIGLSWEPKLPASSSGI+TKTC+KSN+QAEN +VWK+NSELVDGLFVPPN PKKLNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE+NRP GNDKWKIRG HSRKRAKDRR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

A0A6J1DMD6 rRNA-processing protein fcf25.3e-9490.31Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MSE+KP+IGLSWEPKL  SSSGI+TKTC+KS+ Q E+SLVWKTN+ELVDGLFVPPN PKKLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDKWKIRGRHSRKRAK+RR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

A0A6J1H9T2 rRNA-processing protein fcf2-like3.5e-9389.8Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MS +KP+I LSWEPKLP SSSGI+TK C+KS+SQA N LVWK NSELVDGLFVPPN PKKLNKLLRKQVSDTAGRNWFDMPAQT+TPE+EKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEE+NRP GNDKWKIRGR SRKRAK+RR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

A0A6J1KU17 rRNA-processing protein fcf2-like5.9e-9389.29Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS
        MS +KP+I LSWEPKLP SSSGI+TK C+KS+SQAEN LVWK NSELVDGLFVPPN PKKLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLKLRS
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRS

Query:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEE+NRP GNDKWKIRGR S+KRAK+RR
Subjt:  VIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

SwissProt top hitse value%identityAlignment
O42877 rRNA-processing protein fcf27.3e-2444.36Show/hide
Query:  RKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRK
        +K + DTAG NWFDMPA  +T  V++D++LLK+R+ +DPKRHY++ ++KS  +PKYFQVG++VE   DF++ R+  +ERK T+ DELL D     Y K+K
Subjt:  RKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRK

Query:  VQEIEERNRPAGNDKWKIRGRHSR-KRAKDRRQ
          E++         K K+ GR  + K+ + RR+
Subjt:  VQEIEERNRPAGNDKWKIRGRHSR-KRAKDRRQ

Q0P5H2 Deoxynucleotidyltransferase terminal-interacting protein 21.4e-2239.07Show/hide
Query:  IRTKTCNKSNSQAENSLVWKT--NSELVDGLFVPP--NKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTL
        +  +T  +   + ++ L+ KT    E      VPP      KL K  R++   TAG  WF M A  +T E++ DL+ LK+R+ +DPKR YKK D      
Subjt:  IRTKTCNKSNSQAENSLVWKT--NSELVDGLFVPP--NKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTL

Query:  PKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEI
        PKYFQ+GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y +RK  EI
Subjt:  PKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEI

Q12035 rRNA-processing protein FCF24.3e-1633.97Show/hide
Query:  ELVDGLFVPPNKPKKLNKL--------LRKQVSDTAGRNWFDMPA--QTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF
        +L  G     NK KK N L         +   SD    +WF +P     +  EV++DL L+K R+ +DPKRHYKK   +   +P+ F +GT++E   +F+
Subjt:  ELVDGLFVPPNKPKKLNKL--------LRKQVSDTAGRNWFDMPA--QTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFF

Query:  TGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKR
        + R+ +KERK+T+ + L+ D+A  +Y KRK  EI+E++       +K      +KR
Subjt:  TGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKR

Q5QJE6 Deoxynucleotidyltransferase terminal-interacting protein 22.4e-2246.22Show/hide
Query:  VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLAD
        VPP    K  L K  RK+   TAG  WF M A  +T E++ DL+ LK+R+ +DPKR YKK D      PKYFQ+GT+V++  DF+  R+ KK+RK T+ +
Subjt:  VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLAD

Query:  ELLSDQALTQYRKRKVQEI
        ELL+D    +Y +RK  EI
Subjt:  ELLSDQALTQYRKRKVQEI

Q8R2M2 Deoxynucleotidyltransferase terminal-interacting protein 26.9e-2245.11Show/hide
Query:  VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLAD
        VPP    K  L K  RK+   TAG  WF M A  +T E++ DLR LK+R+ +DPKR YKK D      PKYFQVGT+V++  DF+  R+ KK+RK T+ +
Subjt:  VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLAD

Query:  ELLSDQALTQYRKRKVQEI-EERNRPAGNDKWK
        ELL+D    ++ +RK  EI  E+   A   K+K
Subjt:  ELLSDQALTQYRKRKVQEI-EERNRPAGNDKWK

Arabidopsis top hitse value%identityAlignment
AT1G54770.1 Fcf2 pre-rRNA processing protein7.7e-5354.92Show/hide
Query:  RKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVID
        ++P+IGL WEPKLP  S  ++T +     +++       + SELVDGL +PPN P+K+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLKLR+V+D
Subjt:  RKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVID

Query:  PKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR
        P  HYKK  S+SK   KYFQ+GTV+E + +F+ GRLTKK RKATLADEL+SD     YRKRKV+EIEE++R   N KW  +G  S K  K RR
Subjt:  PKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRR

AT5G30495.1 Fcf2 pre-rRNA processing protein1.1e-5958.08Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQA---ENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK
        M+E KP+IGL+WEPKLP  S  + TKTC+ S+ +    E+S +W + SELVDGL +PPN PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQA---ENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK

Query:  LRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDR
        LR+V+DP  HYKK  S+SK   KYFQ+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   N KWK +G  +  + + R
Subjt:  LRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDR

AT5G30495.2 Fcf2 pre-rRNA processing protein1.1e-5958.08Show/hide
Query:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQA---ENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK
        M+E KP+IGL+WEPKLP  S  + TKTC+ S+ +    E+S +W + SELVDGL +PPN PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK
Subjt:  MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQA---ENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK

Query:  LRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDR
        LR+V+DP  HYKK  S+SK   KYFQ+GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   N KWK +G  +  + + R
Subjt:  LRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATCGGGGATCAGAACTAAAACTTGTAATAAATCTAACAGTCAAGCAGAAAA
CAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTG
GGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAAAAG
GGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAAC
GCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATCGAAGAGCGGAATCGACCTGCTGGCAACGATAAATGGAAAATAA
GGGGTCGTCATTCACGAAAACGGGCAAAGGATAGGAGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATCGGGGATCAGAACTAAAACTTGTAATAAATCTAACAGTCAAGCAGAAAA
CAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTG
GGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAAAAG
GGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAAC
GCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATCGAAGAGCGGAATCGACCTGCTGGCAACGATAAATGGAAAATAA
GGGGTCGTCATTCACGAAAACGGGCAAAGGATAGGAGGCAGTAG
Protein sequenceShow/hide protein sequence
MSERKPIIGLSWEPKLPASSSGIRTKTCNKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKLRSVIDPKRHYKK
GDSKSKTLPKYFQVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEERNRPAGNDKWKIRGRHSRKRAKDRRQ