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CcUC06G112680 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G112680
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionS-protein homolog
Genome locationCicolChr06:3759669..3761801
RNA-Seq ExpressionCcUC06G112680
SyntenyCcUC06G112680
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]1.3e-3359.29Show/hide
Query:  TNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNV
        ++W V+I N+QK+A L  HCKSKDDDLG  VL  +G+ YSW FKEN +QTT FWC+F S  GHASFEVFWPE G WL  RC+  NC W A N GF L N+
Subjt:  TNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNV

Query:  PTKTLEFQHPWLH
        P +  EF H W H
Subjt:  PTKTLEFQHPWLH

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]1.2e-6880.54Show/hide
Query:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA
        ME LKSFALL+ VLAFA K+++C C   +SKY+LPLT+WQVTIINYQ NA+LE+HCKSKDDDLGVHV++NEGE YSW FKENW QTTKFWCNFQSRLGHA
Subjt:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA

Query:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH
        SFEVFWPE GTWLSDRC +SNCVWVA N GFSLLN P KTLEFQHPWLH
Subjt:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH

XP_011656368.1 S-protein homolog 1 [Cucumis sativus]9.0e-6475.33Show/hide
Query:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA
        ME LKSFALL+ VLAFA K+++  C   +SKY+LPLT+W VTIINYQ NA+L++HCKSKDDDLGVHV++NEGEHYSW FKENW QTTK+WC+FQS+LGHA
Subjt:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA

Query:  SFEVFWPENGTWLSDRC-EDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH
        SFEVFWPE GTW SDRC  +SNCVWVA + GFSLLN P KTLEFQHPWLH
Subjt:  SFEVFWPENGTWLSDRC-EDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH

XP_022137291.1 S-protein homolog 1-like [Momordica charantia]1.5e-3157.39Show/hide
Query:  PLTNWQVTIINYQKNAA-LEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVA-DNKGFS
        P ++WQVTI NY K +A L +HCKSKDDDLG HV++  G  Y W+FKEN++QTT FWCNF+S  GHAS EVFWPE   WL+ RC+ SNC+WVA  ++G  
Subjt:  PLTNWQVTIINYQKNAA-LEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVA-DNKGFS

Query:  LLNVPTKTLEFQHPW
        L +VP +T E ++ W
Subjt:  LLNVPTKTLEFQHPW

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]6.0e-7686.58Show/hide
Query:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA
        ME LKSFALLV VLAFAC +E+C C  W+SKY+LPLTNWQVTIINYQKNAALE+HCKSKDDDLGVHV+KNEGEHY+W FKEN+ QTT+FWCNFQSRLGHA
Subjt:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA

Query:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH
        SFEVFWPE+GTWLSDRC+DSNCVWVADNKGFSLLN+PTKTLEFQHPWLH
Subjt:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog4.4e-6475.33Show/hide
Query:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA
        ME LKSFALL+ VLAFA K+++  C   +SKY+LPLT+W VTIINYQ NA+L++HCKSKDDDLGVHV++NEGEHYSW FKENW QTTK+WC+FQS+LGHA
Subjt:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA

Query:  SFEVFWPENGTWLSDRC-EDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH
        SFEVFWPE GTW SDRC  +SNCVWVA + GFSLLN P KTLEFQHPWLH
Subjt:  SFEVFWPENGTWLSDRC-EDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH

A0A1S3C8Z6 S-protein homolog5.9e-6980.54Show/hide
Query:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA
        ME LKSFALL+ VLAFA K+++C C   +SKY+LPLT+WQVTIINYQ NA+LE+HCKSKDDDLGVHV++NEGE YSW FKENW QTTKFWCNFQSRLGHA
Subjt:  METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHA

Query:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH
        SFEVFWPE GTWLSDRC +SNCVWVA N GFSLLN P KTLEFQHPWLH
Subjt:  SFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH

A0A6J1C659 S-protein homolog7.5e-3257.39Show/hide
Query:  PLTNWQVTIINYQKNAA-LEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVA-DNKGFS
        P ++WQVTI NY K +A L +HCKSKDDDLG HV++  G  Y W+FKEN++QTT FWCNF+S  GHAS EVFWPE   WL+ RC+ SNC+WVA  ++G  
Subjt:  PLTNWQVTIINYQKNAA-LEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVA-DNKGFS

Query:  LLNVPTKTLEFQHPW
        L +VP +T E ++ W
Subjt:  LLNVPTKTLEFQHPW

A0A6J1GSD6 S-protein homolog2.9e-2848.39Show/hide
Query:  CCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCV
        C A  +S      +NW+V I+N  K++ L +HCKSKDDDLG HV+K  G+ Y W+F EN  QTT +WCNF S+ G AS +VFWPE   WLSDRC  + C+
Subjt:  CCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCV

Query:  WVADNKGFSLLNVPTKTLEFQHPW
        WVA + G S+        E  +PW
Subjt:  WVADNKGFSLLNVPTKTLEFQHPW

A0A6J1KR58 S-protein homolog1.3e-2843.88Show/hide
Query:  LLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPE
        +L+  L     ++ C      SK +LP + WQVTI N+  ++ L +HCKSKD+DLG H +K +G++Y  +FKEN +QTT+FWC+F S+ G  + +VFWPE
Subjt:  LLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPE

Query:  NGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW
         G+ LSD C D NCVW A + G  LL     + +  +PW
Subjt:  NGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.0e-1034.41Show/hide
Query:  HCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW
        HCKSKDDDLG   L+  GE +S+ F   +F  T ++C+F       SF+++     +   ++CE   CVW     G    N  TK  +  +PW
Subjt:  HCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW

F4JLS0 S-protein homolog 12.1e-1536.96Show/hide
Query:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL
        M  +K F L + F LA  C+              +P ++ WQVT++N       L IHCKSK+DDLG   LK     +SW F EN   +T FWC      
Subjt:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL

Query:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN
        GH +  VFW +    L  RC   NC+W A   G  L N
Subjt:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN

Q2HQ46 S-protein homolog 744.7e-1536.96Show/hide
Query:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL
        M  +K F L + F L   C+              +P ++ WQVT+ N       L IHCKSK++DLG   LK   + +SW F EN   +T FWC      
Subjt:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL

Query:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN
        GH + +VFW +    L  RC+  NCVW A N G  L N
Subjt:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN

Q9FI83 S-protein homolog 284.6e-1036.04Show/hide
Query:  QVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGF-SLLNVPT
        +VTI NY  +  L IHCKS+DDDLG H+L  +GE + W+F  N+  +T  +C F  R  +    + +  +  +   RC  +NC W A+  GF    ++PT
Subjt:  QVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGF-SLLNVPT

Query:  KTLEFQHPWLH
        +   F + WL+
Subjt:  KTLEFQHPWLH

Q9FI84 S-protein homolog 272.3e-0937.07Show/hide
Query:  PLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNF-QSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKG-FS
        PLT  ++T+ N   +  L IHCKSKDDDLG H+ K EGE Y W+F  N+  +T ++C F Q +     F++   E   +   RC   NC W A     + 
Subjt:  PLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNF-QSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKG-FS

Query:  LLNVPTKTLEFQHPWL
          N+P +T+ +   WL
Subjt:  LLNVPTKTLEFQHPWL

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.5e-1134.41Show/hide
Query:  HCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW
        HCKSKDDDLG   L+  GE +S+ F   +F  T ++C+F       SF+++     +   ++CE   CVW     G    N  TK  +  +PW
Subjt:  HCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPW

AT4G16295.1 S-protein homologue 11.5e-1636.96Show/hide
Query:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL
        M  +K F L + F LA  C+              +P ++ WQVT++N       L IHCKSK+DDLG   LK     +SW F EN   +T FWC      
Subjt:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL

Query:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN
        GH +  VFW +    L  RC   NC+W A   G  L N
Subjt:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN

AT4G29035.1 Plant self-incompatibility protein S1 family3.3e-1636.96Show/hide
Query:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL
        M  +K F L + F L   C+              +P ++ WQVT+ N       L IHCKSK++DLG   LK   + +SW F EN   +T FWC      
Subjt:  METLKSFALLV-FVLAFACKIERCCCAAWNSKYELP-LTNWQVTIIN-YQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRL

Query:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN
        GH + +VFW +    L  RC+  NCVW A N G  L N
Subjt:  GHASFEVFWPENGTWLSDRCEDSNCVWVADNKGFSLLN

AT5G06020.1 Plant self-incompatibility protein S1 family1.6e-1037.07Show/hide
Query:  PLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNF-QSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKG-FS
        PLT  ++T+ N   +  L IHCKSKDDDLG H+ K EGE Y W+F  N+  +T ++C F Q +     F++   E   +   RC   NC W A     + 
Subjt:  PLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNF-QSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKG-FS

Query:  LLNVPTKTLEFQHPWL
          N+P +T+ +   WL
Subjt:  LLNVPTKTLEFQHPWL

AT5G06030.1 Plant self-incompatibility protein S1 family3.2e-1136.04Show/hide
Query:  QVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGF-SLLNVPT
        +VTI NY  +  L IHCKS+DDDLG H+L  +GE + W+F  N+  +T  +C F  R  +    + +  +  +   RC  +NC W A+  GF    ++PT
Subjt:  QVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENGTWLSDRCEDSNCVWVADNKGF-SLLNVPT

Query:  KTLEFQHPWLH
        +   F + WL+
Subjt:  KTLEFQHPWLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCTCAAATCTTTTGCACTTTTGGTTTTTGTTTTGGCATTTGCCTGCAAAATCGAACGATGTTGTTGTGCTGCATGGAATTCCAAATACGAGCTACCATTGAC
GAATTGGCAAGTAACGATTATAAACTACCAAAAGAATGCAGCTCTAGAGATTCATTGTAAATCGAAAGACGATGATTTAGGAGTGCACGTGCTAAAGAACGAAGGAGAGC
ATTATAGTTGGGAATTCAAGGAGAATTGGTTTCAAACGACGAAATTTTGGTGCAATTTTCAGAGCAGATTAGGGCATGCTTCATTCGAAGTATTTTGGCCAGAGAATGGA
ACTTGGCTTTCCGATCGCTGTGAAGATTCAAATTGCGTTTGGGTTGCTGATAATAAAGGCTTCTCTTTGCTCAATGTTCCTACTAAGACTTTGGAGTTTCAACATCCATG
GCTACACTAG
mRNA sequenceShow/hide mRNA sequence
ACCATTGAAGAAGATCATGGAAACTCTCAAATCTTTTGCACTTTTGGTTTTTGTTTTGGCATTTGCCTGCAAAATCGAACGATGTTGTTGTGCTGCATGGAATTCCAAAT
ACGAGCTACCATTGACGAATTGGCAAGTAACGATTATAAACTACCAAAAGAATGCAGCTCTAGAGATTCATTGTAAATCGAAAGACGATGATTTAGGAGTGCACGTGCTA
AAGAACGAAGGAGAGCATTATAGTTGGGAATTCAAGGAGAATTGGTTTCAAACGACGAAATTTTGGTGCAATTTTCAGAGCAGATTAGGGCATGCTTCATTCGAAGTATT
TTGGCCAGAGAATGGAACTTGGCTTTCCGATCGCTGTGAAGATTCAAATTGCGTTTGGGTTGCTGATAATAAAGGCTTCTCTTTGCTCAATGTTCCTACTAAGACTTTGG
AGTTTCAACATCCATGGCTACACTAGACTTATAATTTGTTTTTACCACTAAACTATATATAGATATATATACTCACACACAATATAGCCAATCCGAAACTTCAAGTCCT
Protein sequenceShow/hide protein sequence
METLKSFALLVFVLAFACKIERCCCAAWNSKYELPLTNWQVTIINYQKNAALEIHCKSKDDDLGVHVLKNEGEHYSWEFKENWFQTTKFWCNFQSRLGHASFEVFWPENG
TWLSDRCEDSNCVWVADNKGFSLLNVPTKTLEFQHPWLH