; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G113460 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G113460
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCicolChr06:4485947..4488365
RNA-Seq ExpressionCcUC06G113460
SyntenyCcUC06G113460
Gene Ontology termsGO:0000077 - DNA damage checkpoint (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domainsIPR007150 - Checkpoint protein Hus1/Mec3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-8266.14Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI
        MF V+L  FEPL++ATSLL QISKDADV+FT   L +I S+ SPRF ATLQ+S R FTN+SV+H +SSKVSLESFHDA+LDGGS  SMSIH+L+  +Q+I
Subjt:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI

Query:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE
        LR+E  S   PPLH EL LSPPQ AE+    GQ+E GKFF V SK LR+IIKELP+F DD +VR+  T++++KFSIASKEIT+TKE  +CRIVG+E E E
Subjt:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE

Query:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFPPL
        T+  I  RPM+FFLNFTYKANRVWFYKT  NS SV+SVPA+G+ GQYV+YFP L
Subjt:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFPPL

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]7.1e-7769.82Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI
        MF V+L  FEPL++ATSLLAQ++KDADVKFTPL L IIVSNRSP+F ATLQLS R FTNFSV+H+ SSKVSL+ FHDA+LDGGS  SM+IHLLD T Q++
Subjt:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI

Query:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE
        LRFET S   PPLH+EL LSPPQ AEN    GQ+E G FF V S+ELRRIIKELP+F  D+ V + VT SQ+KFSI SKEI LTKEG HC+IVG+E EVE
Subjt:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE

Query:  TQFQIILRPMLFFLNFTYKANR
        T+ Q++LRPM+FFLNFTY+AN+
Subjt:  TQFQIILRPMLFFLNFTYKANR

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.1e-9674.02Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL
        MF VKL +F+PL++ATS LAQIS D AD+KFTP K +II S+RSPRF ATLQLS ++FT FSV++DHSSKVSLESFHDA+LDGGS  SM+IHLLDKT Q+
Subjt:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL

Query:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE
        ILRF+T S    PLH+ELTLSPPQ AE+N IG  +L+E K+FIVKSK LRRIIK+LPIFQ+DS++ + VTNS++KFSIASKEI LT EG HC+I GFEEE
Subjt:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE

Query:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP
        VETQFQIIL PM+FFLNFTYKANRVWFYKTKNN+Y++M VPAYGI GQYVIYFP
Subjt:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]1.2e-8770.08Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQIS-KDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL
        MF VKLT+FEPL+++T  LA  S  +A VKFTP KL++IVSNR P F ATLQLS R+FTNFSV+H HSSKVSLESFHDA+LDGG   +MSIHLLDKT Q+
Subjt:  MFFVKLTDFEPLMEATSLLAQIS-KDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL

Query:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE
        ILRF+T S    PLH ELTLSPPQ +E++ IG  +L   KFFIV SK LRR+IKELPIFQ+DS++ + VT SQIKFSIAS +I  + EG HCRI GFEEE
Subjt:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE

Query:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP
        VETQFQI L PMLFFLNFTY+A+RVWFYKTKNN+Y+VM VPA+GI GQY IYFP
Subjt:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]3.1e-10478.26Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI
        MF VKLT+FEPL++ATS LAQIS  ADVKFTPL+ Y+I    SPRF ATLQLS + FTN+SV+H+H+SKV LESFHDA+LDGGS  SM+IHLL+K  Q+I
Subjt:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI

Query:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE
        LRF+T S   PPLH+ELT SPPQLA+ NNIGGQLEEGKFFIVKS+ LRRIIKELPIFQDDSVV +GVT+SQIKFSIASKEI L  +  HCRIVGFEEEVE
Subjt:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE

Query:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFPP
        TQFQIILRPMLFFLNFTYKAN+VWFYKTKNNSYSVM+VPA+GI GQYVIYFPP
Subjt:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFPP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980103.4e-7769.82Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI
        MF V+L  FEPL++ATSLLAQ++KDADVKFTPL L IIVSNRSP+F ATLQLS R FTNFSV+H+ SSKVSL+ FHDA+LDGGS  SM+IHLLD T Q++
Subjt:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI

Query:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE
        LRFET S   PPLH+EL LSPPQ AEN    GQ+E G FF V S+ELRRIIKELP+F  D+ V + VT SQ+KFSI SKEI LTKEG HC+IVG+E EVE
Subjt:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE

Query:  TQFQIILRPMLFFLNFTYKANR
        T+ Q++LRPM+FFLNFTY+AN+
Subjt:  TQFQIILRPMLFFLNFTYKANR

A0A1S3CL88 uncharacterized protein LOC1035022501.5e-9674.02Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL
        MF VKL +F+PL++ATS LAQIS D AD+KFTP K +II S+RSPRF ATLQLS ++FT FSV++DHSSKVSLESFHDA+LDGGS  SM+IHLLDKT Q+
Subjt:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL

Query:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE
        ILRF+T S    PLH+ELTLSPPQ AE+N IG  +L+E K+FIVKSK LRRIIK+LPIFQ+DS++ + VTNS++KFSIASKEI LT EG HC+I GFEEE
Subjt:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE

Query:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP
        VETQFQIIL PM+FFLNFTYKANRVWFYKTKNN+Y++M VPAYGI GQYVIYFP
Subjt:  VETQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP

A0A5D3BV00 Uncharacterized protein2.1e-5865.78Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL
        MF VKLT+FEPL+++TS LAQ S D AD+KF P KL++IV NRSPRFFATLQLS R+F+N+SV+H HSSKVSLESFHDA+LDGG   SMSIHLLDKT Q+
Subjt:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL

Query:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKE
         LRF+T S    P H+ELTLSPPQ  +      +L+  KF IVKSK LRR+IKELPIF +DS++ + VT SQIKFSIASK I L++E
Subjt:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.0e-7371.03Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL
        MF VKL +F+PL++ATS LAQIS D AD+KFTP K +II S+RSPRF ATLQLS ++FT FSV++DHSSKVSLESFHDA+LDGGS  SM+IHLLDKT Q+
Subjt:  MFFVKLTDFEPLMEATSLLAQISKD-ADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQL

Query:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE
        ILRF+T S    PLH+ELTLSPPQ AE+N IG  +L+E K+FIVKSK LRRIIK+LPIFQ+DS++ + VTNS++KFSIASKEI LT EG HC+I GFEEE
Subjt:  ILRFETSSQIFPPLHYELTLSPPQLAENNNIG-GQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEE

Query:  VETQFQIILRPMLF
        VETQFQIIL PM++
Subjt:  VETQFQIILRPMLF

A0A6J1KIW5 uncharacterized protein LOC1114948741.6e-5849.21Show/hide
Query:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI
        MF V+L +F PL++ TS LAQI++++D+ FTPL L +  S  SPRF ATLQ+  + FT +SVN DH S++SLES HDALLD GSS +M+IHLL+ T  ++
Subjt:  MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLI

Query:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE
        LRFET +   P L ++  L PPQ         ++E  K   + S++LR++IKELP+F  DSV  + VT+S+++FSIAS+E+   KE   C I+G + +  
Subjt:  LRFETSSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVE

Query:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP
        T+F+I+L PMLFFLN TY    VWF+KT  N++ VM  P + I  QYVIYFP
Subjt:  TQFQIILRPMLFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCGTCAAGCTCACGGACTTTGAACCTCTTATGGAAGCAACCTCCTTATTGGCTCAAATTTCGAAGGATGCCGACGTGAAATTTACGCCGTTGAAGCTC
TACATAATCGTCTCTAACCGTTCCCCTCGCTTCTTTGCAACGCTCCAATTGTCAGATCGATTCTTCACCAACTTTTCCGTCAATCATGATCACAGTTCCAAGGTT
TCCCTTGAATCCTTCCATGATGCTTTGTTGGATGGCGGAAGCTCTTGTTCAATGTCTATCCATCTTTTGGATAAAACAAAACAATTGATCCTTAGATTTGAGACT
TCAAGTCAAATATTCCCACCTTTGCATTATGAATTGACATTGTCACCTCCCCAATTAGCAGAGAATAATAATATAGGGGGCCAACTTGAAGAAGGAAAATTTTTC
ATAGTTAAATCTAAGGAATTAAGACGAATTATAAAAGAATTACCTATCTTCCAAGATGATTCAGTCGTTCGTATTGGTGTAACCAATTCTCAAATCAAGTTCTCC
ATTGCATCTAAGGAGATTACGCTTACTAAAGAGGGTCCACACTGTCGAATTGTAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCATTCTCCGTCCCATG
TTGTTTTTCCTCAATTTTACATATAAAGCAAATAGGGTTTGGTTTTATAAGACAAAGAATAATTCTTATAGTGTAATGAGTGTCCCAGCTTATGGAATTTCTGGC
CAATATGTAATCTATTTTCCCCCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCGTCAAGCTCACGGACTTTGAACCTCTTATGGAAGCAACCTCCTTATTGGCTCAAATTTCGAAGGATGCCGACGTGAAATTTACGCCGTTGAAGCTC
TACATAATCGTCTCTAACCGTTCCCCTCGCTTCTTTGCAACGCTCCAATTGTCAGATCGATTCTTCACCAACTTTTCCGTCAATCATGATCACAGTTCCAAGGTT
TCCCTTGAATCCTTCCATGATGCTTTGTTGGATGGCGGAAGCTCTTGTTCAATGTCTATCCATCTTTTGGATAAAACAAAACAATTGATCCTTAGATTTGAGACT
TCAAGTCAAATATTCCCACCTTTGCATTATGAATTGACATTGTCACCTCCCCAATTAGCAGAGAATAATAATATAGGGGGCCAACTTGAAGAAGGAAAATTTTTC
ATAGTTAAATCTAAGGAATTAAGACGAATTATAAAAGAATTACCTATCTTCCAAGATGATTCAGTCGTTCGTATTGGTGTAACCAATTCTCAAATCAAGTTCTCC
ATTGCATCTAAGGAGATTACGCTTACTAAAGAGGGTCCACACTGTCGAATTGTAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCATTCTCCGTCCCATG
TTGTTTTTCCTCAATTTTACATATAAAGCAAATAGGGTTTGGTTTTATAAGACAAAGAATAATTCTTATAGTGTAATGAGTGTCCCAGCTTATGGAATTTCTGGC
CAATATGTAATCTATTTTCCCCCTCTTTGA
Protein sequenceShow/hide protein sequence
MFFVKLTDFEPLMEATSLLAQISKDADVKFTPLKLYIIVSNRSPRFFATLQLSDRFFTNFSVNHDHSSKVSLESFHDALLDGGSSCSMSIHLLDKTKQLILRFET
SSQIFPPLHYELTLSPPQLAENNNIGGQLEEGKFFIVKSKELRRIIKELPIFQDDSVVRIGVTNSQIKFSIASKEITLTKEGPHCRIVGFEEEVETQFQIILRPM
LFFLNFTYKANRVWFYKTKNNSYSVMSVPAYGISGQYVIYFPPL