; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G116480 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G116480
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationCicolChr06:8234929..8235207
RNA-Seq ExpressionCcUC06G116480
SyntenyCcUC06G116480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]2.5e-40100Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
        MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]2.5e-40100Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
        MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.5e-2479.35Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MFLKYFLLLLLAVVLLTTTQALKHPS+SNQEVIP TD       TT TDP+EESKFY++P  YK+P YKRPPYK+YPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

XP_008460638.1 PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo]5.6e-2477.17Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIP TD    T  TT  DP+EESKFY++P+ YK+P YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]1.6e-2372.63Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDP---DEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+    KRPY K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDP---DEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein7.2e-2579.35Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MFLKYFLLLLLAVVLLTTTQALKHPS+SNQEVIP TD       TT TDP+EESKFY++P  YK+P YKRPPYK+YPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

A0A0A0LNP2 Uncharacterized protein3.3e-2276.09Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MF KYFLLLLLAVVLLTTTQALKHP +SNQE IP TD       TT TDP+EESKF+++P  YK+P YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like2.7e-2477.17Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIP TD    T  TT  DP+EESKFY++P+ YK+P YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like2.7e-2477.17Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS
        MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIP TD    T  TT  DP+EESKFY++P+ YK+P YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPY-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS

A0A6J1EWV3 uncharacterized protein LOC1114368706.7e-2371.58Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDP---DEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
        MF+KYFLLLLLAVVLLTTTQALKHPSDS  EVIP+++++LP+TT T+T+P    EESKFY+K  YK    K PPYK+YPPYKK PPYKKYPPSS+
Subjt:  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDP---DEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAATACTTTCTTCTGCTTCTTCTTGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACACCCCTCGGACTCCAACCAGGAAGTGATTCCGTTG
ACCGACGAAAGGCTTCCGACCACTACCACCACCAACACCGACCCGGACGAAGAATCCAAGTTCTACAAGAAGCCTTATTACAAGAGGCCTTATTACAAGAGGCCA
CCCTACAAGAAGTATCCACCCTACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTCAAATACTTTCTTCTGCTTCTTCTTGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACACCCCTCGGACTCCAACCAGGAAGTGATTCCGTTG
ACCGACGAAAGGCTTCCGACCACTACCACCACCAACACCGACCCGGACGAAGAATCCAAGTTCTACAAGAAGCCTTATTACAAGAGGCCTTATTACAAGAGGCCA
CCCTACAAGAAGTATCCACCCTACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCGACTAA
Protein sequenceShow/hide protein sequence
MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD