; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G117100 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G117100
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionsmall acidic protein 1
Genome locationCicolChr06:9192586..9194810
RNA-Seq ExpressionCcUC06G117100
SyntenyCcUC06G117100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0897.06Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0897.06Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
XP_022964281.1 small acidic protein 1 [Cucurbita moschata]1.5e-0897.06Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]6.7e-0972.92Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEEHMRCRMPFDDSTY
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE  +       DS +
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEEHMRCRMPFDDSTY
XP_038875245.1 small acidic protein 1 [Benincasa hispida]8.7e-09100Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
TrEMBL top hitse value%identityAlignment
A0A0A0LNK1 Uncharacterized protein1.0e-0794.12Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
A0A1S3CCM1 small acidic protein 11.0e-0794.12Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
A0A5A7SMJ5 Small acidic protein 11.0e-0794.12Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
A0A6J1HIH2 small acidic protein 17.2e-0997.06Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
A0A6J1KE12 small acidic protein 17.2e-0997.06Show/hide
Query:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
        MRPTPMEFFAE+EEQGSTVAMDVDDVDPLEILGE
Subjt:  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCTACACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAAGGATCGACGGTCGCCATGGACGTGGACGATGTGGACCCACTTGAGATATTGGGCGAGGAA
CATATGAGATGCAGAATGCCTTTTGATGACTCCACTTATGAGCTTGGAAGAAGGATGTCTGAGGGGGGATCATCACGTTGCCAGTTAGGAGAGTTGATGCAGTTA
GGACTTGAGATGTTTGTTAGAGAGCTTATGAAGACAGTTAGACACATAGTGAAGTATCTGATGGTTTTGCCATCTCACTCAAAATCAGAACCACAATGTGTGTTG
AACCCACAACAGCCCCAACAAATGATTGCACATGCTCTTAGTCATGTGAGTTCTTTTCTCTGGGAGTTTATAGAAGCATTGGTACATGGCCTGATTGCATTTGTC
ATTGAGCAGGAACCATGTACCGTTGAATTTAATGAGCAAGTTTCTAGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCTACACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAAGGATCGACGGTCGCCATGGACGTGGACGATGTGGACCCACTTGAGATATTGGGCGAGGAA
CATATGAGATGCAGAATGCCTTTTGATGACTCCACTTATGAGCTTGGAAGAAGGATGTCTGAGGGGGGATCATCACGTTGCCAGTTAGGAGAGTTGATGCAGTTA
GGACTTGAGATGTTTGTTAGAGAGCTTATGAAGACAGTTAGACACATAGTGAAGTATCTGATGGTTTTGCCATCTCACTCAAAATCAGAACCACAATGTGTGTTG
AACCCACAACAGCCCCAACAAATGATTGCACATGCTCTTAGTCATGTGAGTTCTTTTCTCTGGGAGTTTATAGAAGCATTGGTACATGGCCTGATTGCATTTGTC
ATTGAGCAGGAACCATGTACCGTTGAATTTAATGAGCAAGTTTCTAGTTCGTGA
Protein sequenceShow/hide protein sequence
MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEEHMRCRMPFDDSTYELGRRMSEGGSSRCQLGELMQLGLEMFVRELMKTVRHIVKYLMVLPSHSKSEPQCVL
NPQQPQQMIAHALSHVSSFLWEFIEALVHGLIAFVIEQEPCTVEFNEQVSSS