; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G117980 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G117980
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionDNL-type domain-containing protein
Genome locationCicolChr06:11645212..11648573
RNA-Seq ExpressionCcUC06G117980
SyntenyCcUC06G117980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7132635.1 hypothetical protein RHSIM_Rhsim09G0114800 [Rhododendron simsii]7.0e-0553.85Show/hide
Query:  GAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGG--VAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVDK
        G G+  GA TGA VGG    + GVG GA +GA   GA  G G+TCGGGK GGN GG    GGGGNAGG +G+EIG +CGG GGG++G   G T GG V  
Subjt:  GAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGG--VAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVDK

Query:  GG--GVVAVGGGVEG---GGETVGKLGGCA
        G   GVV VGGG  G   G   V + GG A
Subjt:  GG--GVVAVGGGVEG---GGETVGKLGGCA

KAF9674159.1 hypothetical protein SADUNF_Sadunf10G0098600 [Salix dunnii]8.8e-0846.2Show/hide
Query:  SGAGDNSGAATGASVGGDDIGVGG--VGNGAR---VGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGG
        +G G N G   G  + G   G GG   G GA     GAG G AC G G+TCGGGK    GGGVAGGGG+AGG  G  +GELC   GGG  GL+ GATLG 
Subjt:  SGAGDNSGAATGASVGGDDIGVGG--VGNGAR---VGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGG

Query:  GVD----KGGGVVA------------VGGGVEGGGETVGKLGG-CAGAWPIAEGNRKPRQITKKGHDLEAM
        G D     GGGV A            VGGGV   G  VGK+ G  AG W     N K RQ   +    EA+
Subjt:  GVD----KGGGVVA------------VGGGVEGGGETVGKLGG-CAGAWPIAEGNRKPRQITKKGHDLEAM

KAG5240320.1 hypothetical protein IMY05_008G0091900 [Salix suchowensis]4.1e-0544.07Show/hide
Query:  SGAGDN-SGAATGASVGGDDIGVGGVGNG---ARVGAGT-------GGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVD
        +GAG   +GA  G S+ G   GV G G G   A  GAGT       G +  G G+TCGGGK    GGGVAGGGG+AG   G   G LCGG GGG +GLV 
Subjt:  SGAGDN-SGAATGASVGGDDIGVGGVGNG---ARVGAGT-------GGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVD

Query:  GATLGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV
        GATLG G D     GGGV A+ G     VEGGG        VG++  G  +G W     N K RQ   +    +A++
Subjt:  GATLGGGVD----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV

PNT23998.1 hypothetical protein POPTR_008G110900, partial [Populus trichocarpa]2.4e-0542.94Show/hide
Query:  SGAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD--
        +GAG+++ A  GA  G    G G  G GA VGAG  GA  G G +     G G+GGGVAGGGG+AG   G  +G LC G GGG +GLV GATLG G D  
Subjt:  SGAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD--

Query:  ------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAMV
                          +GGGVV VG GV   GE V   G  AG W     N K RQ T +    +A++
Subjt:  ------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAMV

TKR85014.1 hypothetical protein D5086_0000253670 [Populus alba]4.1e-0544.57Show/hide
Query:  SGAGDN-SGAATGASVGGDDIGVGGVGNGARV-GAGTG-------------GACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMV
        +GAG   +GA  GA V G   GV G G GA V GAG G             GA  G G+T GGGK    GGGVAGGGG+AG   G  +G LC G GGG +
Subjt:  SGAGDN-SGAATGASVGGDDIGVGGVGNGARV-GAGTG-------------GACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMV

Query:  GLVDGATLGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKPRQITKKGHDLEAMV
        GLV GATLG G D     GG V+A       V G VEGGG E VG +       G  AG W     N K RQ T +    +A++
Subjt:  GLVDGATLGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKPRQITKKGHDLEAMV

TrEMBL top hitse value%identityAlignment
A0A2K1ZFE8 DNL-type domain-containing protein (Fragment)1.2e-0542.94Show/hide
Query:  SGAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD--
        +GAG+++ A  GA  G    G G  G GA VGAG  GA  G G +     G G+GGGVAGGGG+AG   G  +G LC G GGG +GLV GATLG G D  
Subjt:  SGAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD--

Query:  ------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAMV
                          +GGGVV VG GV   GE V   G  AG W     N K RQ T +    +A++
Subjt:  ------------------KGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAMV

A0A4U5NPX3 Uncharacterized protein2.0e-0544.57Show/hide
Query:  SGAGDN-SGAATGASVGGDDIGVGGVGNGARV-GAGTG-------------GACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMV
        +GAG   +GA  GA V G   GV G G GA V GAG G             GA  G G+T GGGK    GGGVAGGGG+AG   G  +G LC G GGG +
Subjt:  SGAGDN-SGAATGASVGGDDIGVGGVGNGARV-GAGTG-------------GACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMV

Query:  GLVDGATLGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKPRQITKKGHDLEAMV
        GLV GATLG G D     GG V+A       V G VEGGG E VG +       G  AG W     N K RQ T +    +A++
Subjt:  GLVDGATLGGGVD----KGGGVVA-------VGGGVEGGG-ETVGKL-------GGCAGAWPIAEGNRKPRQITKKGHDLEAMV

A0A5N5L690 Uncharacterized protein4.4e-0543.21Show/hide
Query:  SGAGDNSGAATGASVGGDDIGVGGVGNGARV---GAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGV
        +G G N G   G  + G   GV G G GA +   GAG   A  G G+TCGGGK         GGGG+AGG  G  +GELC   GGG  GLV GATLG G 
Subjt:  SGAGDNSGAATGASVGGDDIGVGGVGNGARV---GAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGV

Query:  D----KGGGVVAVGG------GVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAM
        D     GGGV A+ G      GV  GG  V   G  AG W     N K RQ   +    EA+
Subjt:  D----KGGGVVAVGG------GVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAM

A0A5N5LQ22 Uncharacterized protein9.9e-0544.38Show/hide
Query:  SGAGDNSGAATGASVGGDDIGVGGVGNGA---RVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGV
        +GAG  +G A GA V G   G    G GA     G G G +  G G+TCGGGK    GGGVAGGGG+AG   G   G LCGG GGG +GLV GATLG G 
Subjt:  SGAGDNSGAATGASVGGDDIGVGGVGNGA---RVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGV

Query:  D----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV
        D     GGGV A+ G     VEGGG        VG++  G  +G W     N K RQ   +    +A++
Subjt:  D----KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV

A0A6N2LSH4 Uncharacterized protein9.9e-0543.03Show/hide
Query:  AGDNSGAATGASVGGDDIGVGGVGNGARV-GAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD---
        AG  +GA  G +  G    + G G G  + G G G +  G G+TCGGGK    GGGVAGGGG+AG   G   G LCGG GGG +GLV GATLG G D   
Subjt:  AGDNSGAATGASVGGDDIGVGGVGNGARV-GAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGVEIGELCGGWGGGMVGLVDGATLGGGVD---

Query:  -KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV
          GGGV A+ G     VEGGG        VG++  G  +G W     N K RQ   +    +A++
Subjt:  -KGGGVVAVGGG----VEGGG------ETVGKL--GGCAGAWPIAEGNRKPRQITKKGHDLEAMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGCCTATTCGTCGTCGGTCCAAGCACCATCTGGGTCGTCTGTCAGCGTACGCTGTCATTCGTGGTTCCAGATTCAACGTGTCGTTGGTATTTTGCTTCA
GGTGCAGGGGATAACTCTGGTGCCGCGACTGGTGCTAGCGTTGGTGGTGACGACATTGGTGTTGGCGGAGTTGGTAATGGTGCTAGGGTGGGAGCTGGCACCGGT
GGTGCCTGTGAAGGAGTTGGAGAGACTTGTGGTGGTGGTAAAGGAGGTGGCAATGGCGGAGGCGTAGCGGGGGGAGGTGGCAATGCTGGTGGTAGCGACGGGGTT
GAGATAGGTGAACTTTGTGGTGGTTGGGGTGGTGGAATGGTTGGGCTTGTTGATGGTGCAACATTAGGCGGTGGTGTTGACAAGGGTGGAGGAGTTGTTGCGGTC
GGAGGCGGAGTGGAAGGCGGTGGTGAGACAGTTGGCAAGCTTGGTGGCTGTGCCGGGGCCTGGCCGATCGCGGAAGGGAATAGAAAGCCAAGGCAAATTACCAAA
AAAGGCCATGATTTGGAAGCCATGGTTGAAGATGGGAATTAA
mRNA sequenceShow/hide mRNA sequence
TGATGATGAAGTATGTGATAGACCCGTCTCATGTTGTGGAGTATGAACCTTTACAATTGTGTGAGAACCTGAGTTATGAGGAAAAGTAGATTCAAATTCTTGCAA
GAGAAGTAAAGGCTTTATACAATTGAGAGATAGCTCTAGTGAAAATTCTATGACAAAATCAAAAGTTCAAGGATGCAACATGGAAACGAGAGGACGAGATGAGGA
CAAAGTACCCAGAGCTTTTTCAGGATTAGAGCTTTTCGAGGGTGAAAGTTTCTTAAGGAGGGAAGAAGGTAGCATCCCGAATTTTTAGAGGGAAAAGGTAAAAGA
AAAGGCAGACTCCCGACCCTCTCTCTCTCACACACACACTAGTGTCTCTCCTCAGCTATCGTTTGTTGTGACGCCACCATGCTCTGCCTATTCGTCGTCGGTCCA
AGCACCATCTGGGTCGTCTGTCAGCGTACGCTGTCATTCGTGGTTCCAGATTCAACGTGTCGTTGGTATTTTGCTTCAGGTGCAGGGGATAACTCTGGTGCCGCG
ACTGGTGCTAGCGTTGGTGGTGACGACATTGGTGTTGGCGGAGTTGGTAATGGTGCTAGGGTGGGAGCTGGCACCGGTGGTGCCTGTGAAGGAGTTGGAGAGACT
TGTGGTGGTGGTAAAGGAGGTGGCAATGGCGGAGGCGTAGCGGGGGGAGGTGGCAATGCTGGTGGTAGCGACGGGGTTGAGATAGGTGAACTTTGTGGTGGTTGG
GGTGGTGGAATGGTTGGGCTTGTTGATGGTGCAACATTAGGCGGTGGTGTTGACAAGGGTGGAGGAGTTGTTGCGGTCGGAGGCGGAGTGGAAGGCGGTGGTGAG
ACAGTTGGCAAGCTTGGTGGCTGTGCCGGGGCCTGGCCGATCGCGGAAGGGAATAGAAAGCCAAGGCAAATTACCAAAAAAGGCCATGATTTGGAAGCCATGGTT
GAAGATGGGAATTAA
Protein sequenceShow/hide protein sequence
MLCLFVVGPSTIWVVCQRTLSFVVPDSTCRWYFASGAGDNSGAATGASVGGDDIGVGGVGNGARVGAGTGGACEGVGETCGGGKGGGNGGGVAGGGGNAGGSDGV
EIGELCGGWGGGMVGLVDGATLGGGVDKGGGVVAVGGGVEGGGETVGKLGGCAGAWPIAEGNRKPRQITKKGHDLEAMVEDGN