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CcUC06G123200 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G123200
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description4CL
Genome locationCicolChr06:25565165..25565446
RNA-Seq ExpressionCcUC06G123200
SyntenyCcUC06G123200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8086116.1 hypothetical protein EE612_009227, partial [Oryza sativa]7.4e-0873.91Show/hide
Query:  ISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSL
        +S AS+SAG TW PLYL+ SL  STMK SSSSSTKP+SPVCSHPS+
Subjt:  ISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSL

OMJ26057.1 hypothetical protein AYI70_g481 [Smittium culicis]3.7e-0764.41Show/hide
Query:  SRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP
        SR S+SAGATW PLYLISSL  ST+ T  SSS  P SPV  +PSLSI  LVAS   +YP
Subjt:  SRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP

TrEMBL top hitse value%identityAlignment
A0A0A9NIU0 Uncharacterized protein2.3e-1071.43Show/hide
Query:  RASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLR
        RAS+SAG TW PLYL+ SL  STMK SSSSSTKP+SPVCSHPSLS++  V S S R
Subjt:  RASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLR

A0A0A9RG59 4CL1.1e-1269.23Show/hide
Query:  MRPWDISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP
        M  W +SRAS+SAG TW PL L+SSL RSTMKTSSSSST P+SPV S PS SI+  VAS S RYP
Subjt:  MRPWDISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP

A0A0P0VFD8 Os02g0177666 protein (Fragment)3.6e-0873.91Show/hide
Query:  ISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSL
        +S AS+SAG TW PLYL+ SL  STMK SSSSSTKP+SPVCSHPS+
Subjt:  ISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSL

A0A1R1YGL6 Uncharacterized protein1.8e-0764.41Show/hide
Query:  SRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP
        SR S+SAGATW PLYLISSL  ST+ T  SSS  P SPV  +PSLSI  LVAS   +YP
Subjt:  SRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACCGTGGGATATAAGCAGGGCTTCCAACTCCGCCGGCGCCACTTGGAAGCCTTTGTATTTGATCAGCTCCTTGAGACGATCGACGATGAAGACCTCGTCGTCGTC
ATCGACGAAACCTATATCGCCGGTGTGCAGCCATCCATCTTTATCAATTATGCCCCTCGTGGCCTCTTCGTCGTTGAGGTATCCTGTTCAATTCAACCAACCAAAACCGG
AACACAGCAATGTAATGGACTCTGTCGATTCTATTGGGCTTGGTTTGGTCTTGGGTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGACCGTGGGATATAAGCAGGGCTTCCAACTCCGCCGGCGCCACTTGGAAGCCTTTGTATTTGATCAGCTCCTTGAGACGATCGACGATGAAGACCTCGTCGTCGTC
ATCGACGAAACCTATATCGCCGGTGTGCAGCCATCCATCTTTATCAATTATGCCCCTCGTGGCCTCTTCGTCGTTGAGGTATCCTGTTCAATTCAACCAACCAAAACCGG
AACACAGCAATGTAATGGACTCTGTCGATTCTATTGGGCTTGGTTTGGTCTTGGGTAATTGA
Protein sequenceShow/hide protein sequence
MRPWDISRASNSAGATWKPLYLISSLRRSTMKTSSSSSTKPISPVCSHPSLSIMPLVASSSLRYPVQFNQPKPEHSNVMDSVDSIGLGLVLGN