; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CcUC06G123380 (gene) of Watermelon (PI 537277) v1 genome

Gene IDCcUC06G123380
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionU4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Genome locationCicolChr06:25778820..25779524
RNA-Seq ExpressionCcUC06G123380
SyntenyCcUC06G123380
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR013957 - U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587747.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]6.5e-9388.89Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

KAG6589703.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-9591.45Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRY DRERDRD+RERDRRRDRED     RDRDRERRR+++DRD ERERGR KRSHTP+R RSRHTRSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRS RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKDSVGGGE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_004146322.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus]1.7e-10196.15Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_008453595.1 PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo]3.4e-10296.58Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_023530476.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo]1.3e-9388.89Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRSPDRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

TrEMBL top hitse value%identityAlignment
A0A0A0LU61 SNRNP27 domain-containing protein8.3e-10296.15Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A1S3BW27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.7e-10296.58Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A5D3CK71 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.7e-10296.58Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1EW85 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like9.2e-9388.46Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD            RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1L1Y6 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like5.4e-9388.03Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERD          R+RDR+RERRRD++DRDRERERGRSKRSHTPDR RSRHTRSRTRSPD+HR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

SwissProt top hitse value%identityAlignment
Q551H4 Serine/threonine-protein kinase fray25.9e-0449.33Show/hide
Query:  DRERDRD---RGRDRDKDRDRDRYKDRERDRDH---RERDRRRDREDRDHRERDRDRERRRDQ-EDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRH
        DRER+RD   R RDRD++R+R+R +DRERDRD    R RDR RDRE    R+R RDR+R RD+  DR RER+R RS R  + DR+RSR + SR RS DR 
Subjt:  DRERDRD---RGRDRDKDRDRDRYKDRERDRDH---RERDRRRDREDRDHRERDRDRERRRDQ-EDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRH

Query:  RSRSLSRTPEDRSSRRRHRSPSPDHARKRHR---RDLTADDEKERQKAVS
        RS S  R    R SR + R  S D  R R R   RD  +   K+  +  S
Subjt:  RSRSLSRTPEDRSSRRRHRSPSPDHARKRHR---RDLTADDEKERQKAVS

Q6DDA4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.6e-0639.38Show/hide
Query:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE
        R R R     RER R R   R++E R RER R R +R            RSR+RSP R RSR          S RRHRS S    R + RRD   DD+K+
Subjt:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE

Query:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
         +++       IA E  + K                  E+EIEMMK +G    FD++KGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q6DH74 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.8e-0841.34Show/hide
Query:  RERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSR--RRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAK
        R R R    R+R R R  S+     DR R R  R R+RS DR R RS SR+P  R SR  RRHRS S    R++ RRD    D KE+   V      I+ 
Subjt:  RERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSR--RRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAK

Query:  EQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        E  + K                  E+EIEMMK +G    F+++KGK   G+     V V  KR+ RQYMNR+GGFNRPL
Subjt:  EQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein7.9e-0941.12Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD
        R R R   RE R  R   RDRERRR +  R RER+R                 RSR+RSP R RSR          S RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K +        K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein5.1e-0840.61Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD
        R R R   RE R  R   R+RERRR +  R RER+R                 RSR+RSP R RSR          S RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K          K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Arabidopsis top hitse value%identityAlignment
AT5G57370.1 unknown protein3.2e-3756.96Show/hide
Query:  DRDRYKDRERDRDHR-ERDRRRDREDRDHRERDRDRERRRDQEDRDRERERG---RSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPEDRSSR
        +RDR ++RERD+D   +RDRRR R+DRD R+RDRDRER     DR+R+R+RG   +  RS TPD  AR+RH     RSP+R+RSRS S       DR   
Subjt:  DRDRYKDRERDRDHR-ERDRRRDREDRDHRERDRDRERRRDQEDRDRERERG---RSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPEDRSSR

Query:  RRHRSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVS
         R RSPSPD   ++  R  + DDEKE  R++ V+D VD     I K++ KQ ++    GGGE  +E   D +EIEMMK LGIP GFDSTKGKPV GADVS
Subjt:  RRHRSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVS

Query:  GVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        G+R VTKRQPRQYMNRRGGFNRPLPAER R
Subjt:  GVRVVTKRQPRQYMNRRGGFNRPLPAERTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGTGACCGTGACCACCGTGAACGT
GACCGGCGTAGGGATCGAGAAGATCGCGACCACCGTGAACGTGACCGGGACCGTGAACGGCGTAGGGATCAAGAAGACCGTGACCGTGAAAGGGAGCGTGGCCGG
AGTAAAAGGTCACACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGTACCCGCTCTCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAG
GACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACGGGATTTGACTGCGGATGATGAAAAGGAGCGGCAGAAAGCA
GTTTCTGACTTCGTTGATGGCATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAA
GATGAAATTGAGATGATGAAGAAATTAGGCATTCCAGTGGGTTTCGATTCAACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACC
AAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGTGACCGTGACCACCGTGAACGT
GACCGGCGTAGGGATCGAGAAGATCGCGACCACCGTGAACGTGACCGGGACCGTGAACGGCGTAGGGATCAAGAAGACCGTGACCGTGAAAGGGAGCGTGGCCGG
AGTAAAAGGTCACACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGTACCCGCTCTCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAG
GACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACGGGATTTGACTGCGGATGATGAAAAGGAGCGGCAGAAAGCA
GTTTCTGACTTCGTTGATGGCATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAA
GATGAAATTGAGATGATGAAGAAATTAGGCATTCCAGTGGGTTTCGATTCAACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACC
AAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAG
Protein sequenceShow/hide protein sequence
MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPE
DRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVT
KRQPRQYMNRRGGFNRPLPAERTR